RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 A0A087WVE0 104 aa14.39□□□□□ -0.11
RNF40-203ENST00000493683 Q6ZVQ6 151 aa14.39□□□□□ -0.11
RNF40-203ENST00000493683 AVPP01185 164 aa14.38□□□□□ -0.11
RNF40-203ENST00000493683 C16orf95Q9H693 158 aa14.38□□□□□ -0.11
RNF40-203ENST00000493683 NCOR2Q9Y618 2525 aa14.38□□□□□ -0.11
RNF40-203ENST00000493683 TRBV7-7A0A0K0K1E9 115 aa14.37□□□□□ -0.11
RNF40-203ENST00000493683 C9orf116Q5BN46 136 aaPredicted RBP14.37□□□□□ -0.11
RNF40-203ENST00000493683 C6orf223Q8N319 242 aa14.36□□□□□ -0.11
RNF40-203ENST00000493683 PLA2G2AP14555 144 aa14.36□□□□□ -0.11
RNF40-203ENST00000493683 TRBV7-6A0A0J9YX20 115 aa14.34□□□□□ -0.11
RNF40-203ENST00000493683 LINC00575Q6W349 94 aa14.34□□□□□ -0.11
RNF40-203ENST00000493683 OXLD1Q5BKU9 147 aa14.33□□□□□ -0.11
RNF40-203ENST00000493683 EDN2P20800 178 aa14.33□□□□□ -0.12
RNF40-203ENST00000493683 LINC01547P58512 204 aaPredicted RBP14.33□□□□□ -0.12
RNF40-203ENST00000493683 PMAIP1Q13794 54 aa14.33□□□□□ -0.12
RNF40-203ENST00000493683 Q9BRP9 147 aa14.32□□□□□ -0.12
RNF40-203ENST00000493683 CXCL6P80162 114 aa14.31□□□□□ -0.12
RNF40-203ENST00000493683 LINC01546A6NGU7 62 aa14.31□□□□□ -0.12
RNF40-203ENST00000493683 hDV103S1A0JD37 113 aa14.3□□□□□ -0.12
RNF40-203ENST00000493683 TMEM254Q8TBM7 123 aa14.3□□□□□ -0.12
RNF40-203ENST00000493683 PRR3P79522 188 aaKnown RBP14.3□□□□□ -0.12
RNF40-203ENST00000493683 SOSTDC1Q6X4U4 206 aa14.29□□□□□ -0.12
RNF40-203ENST00000493683 IGHV6-1A0A0B4J1U7 121 aa14.28□□□□□ -0.12
RNF40-203ENST00000493683 SRCAPQ6ZRS2 3230 aa14.27□□□□□ -0.12
RNF40-203ENST00000493683 H0Y9P7 68 aa14.27□□□□□ -0.12
RNF40-203ENST00000493683 CDSNQ15517 529 aa14.27□□□□□ -0.13
RNF40-203ENST00000493683 IGF2RP11717 2491 aa14.27□□□□□ -0.13
RNF40-203ENST00000493683 HCG22E2RYF7 251 aa14.26□□□□□ -0.13
RNF40-203ENST00000493683 CIRBP-AS1Q8TBR5 109 aa14.25□□□□□ -0.13
RNF40-203ENST00000493683 BCE1O60756 84 aa14.25□□□□□ -0.13
RNF40-203ENST00000493683 TANC2Q9HCD6 1990 aa14.25□□□□□ -0.13
RNF40-203ENST00000493683 A0A087WSZ3 146 aa14.25□□□□□ -0.13
RNF40-203ENST00000493683 LINC00846Q9NV44 126 aa14.25□□□□□ -0.13
RNF40-203ENST00000493683 PRRC2AP48634 2157 aaKnown RBP14.25□□□□□ -0.13
RNF40-203ENST00000493683 Q8N2B8 174 aa14.24□□□□□ -0.13
RNF40-203ENST00000493683 LRP4O75096 1905 aa14.24□□□□□ -0.13
RNF40-203ENST00000493683 IGLV5-39A0A0G2JS06 123 aa14.23□□□□□ -0.13
RNF40-203ENST00000493683 Q6ZSN1 163 aa14.23□□□□□ -0.13
RNF40-203ENST00000493683 Q6ZTC4 211 aa14.23□□□□□ -0.13
RNF40-203ENST00000493683 KIF25-AS1Q9Y6Z4 181 aa14.23□□□□□ -0.13
RNF40-203ENST00000493683 LYPD5Q6UWN5 251 aa14.23□□□□□ -0.13
RNF40-203ENST00000493683 EML5Q05BV3 1969 aa14.22□□□□□ -0.13
RNF40-203ENST00000493683 IGLV5-52A0A0A0MRZ9 124 aa14.21□□□□□ -0.13
RNF40-203ENST00000493683 CEP192Q8TEP8 1941 aa14.21□□□□□ -0.14
RNF40-203ENST00000493683 A0A1B0GW54 56 aa14.2□□□□□ -0.14
RNF40-203ENST00000493683 LINC00337Q8N6G1 96 aa14.2□□□□□ -0.14
RNF40-203ENST00000493683 PIEZO2Q9H5I5 2752 aa14.18□□□□□ -0.14
RNF40-203ENST00000493683 RETNQ9HD89 108 aa14.18□□□□□ -0.14
RNF40-203ENST00000493683 ARHGAP32A7KAX9 2087 aa14.18□□□□□ -0.14
RNF40-203ENST00000493683 CDIP1Q9H305 208 aa14.18□□□□□ -0.14
RNF40-203ENST00000493683 PCOTHQ58A44 107 aa14.17□□□□□ -0.14
RNF40-203ENST00000493683 LIMD2Q9BT23 127 aa14.17□□□□□ -0.14
RNF40-203ENST00000493683 KRTAP10-9P60411 292 aa14.16□□□□□ -0.14
RNF40-203ENST00000493683 LINC01556Q5JQF7 62 aa14.16□□□□□ -0.14
RNF40-203ENST00000493683 Q6ZRU5 148 aa14.14□□□□□ -0.15
RNF40-203ENST00000493683 SMR3AQ99954 134 aa14.14□□□□□ -0.15
RNF40-203ENST00000493683 PSPHP1O15172 72 aa14.14□□□□□ -0.15
RNF40-203ENST00000493683 TLN1Q9Y490 2541 aaKnown RBP14.13□□□□□ -0.15
RNF40-203ENST00000493683 C11orf72Q8NBR9 251 aa14.12□□□□□ -0.15
RNF40-203ENST00000493683 CRYGAP11844 174 aa14.11□□□□□ -0.15
RNF40-203ENST00000493683 TP53AIP1Q9HCN2 124 aa14.1□□□□□ -0.15
RNF40-203ENST00000493683 IGHV3OR16-9A0A0B4J2B5 98 aa14.1□□□□□ -0.15
RNF40-203ENST00000493683 JMJD1CQ15652 2540 aa14.09□□□□□ -0.15
RNF40-203ENST00000493683 FSHBP01225 129 aa14.09□□□□□ -0.15
RNF40-203ENST00000493683 C1orf64Q8NEQ6 169 aa14.09□□□□□ -0.15
RNF40-203ENST00000493683 IGLV5-45A0A087WSX0 123 aa14.09□□□□□ -0.15
RNF40-203ENST00000493683 FAM19A4Q96LR4 140 aa14.09□□□□□ -0.15
RNF40-203ENST00000493683 C22orf24Q9Y442 160 aa14.08□□□□□ -0.16
RNF40-203ENST00000493683 A0A1W2PPR1 153 aa14.07□□□□□ -0.16
RNF40-203ENST00000493683 SMCR5Q8TEV8 140 aa14.07□□□□□ -0.16
RNF40-203ENST00000493683 C1orf134Q5TEV5 83 aa14.06□□□□□ -0.16
RNF40-203ENST00000493683 SPATA3Q8NHX4 192 aa14.06□□□□□ -0.16
RNF40-203ENST00000493683 LINC00315P59091 139 aa14.06□□□□□ -0.16
RNF40-203ENST00000493683 COL5A1P20908 1838 aaPredicted RBP14.06□□□□□ -0.16
RNF40-203ENST00000493683 PRO0628Q9UI54 55 aa14.05□□□□□ -0.16
RNF40-203ENST00000493683 NHLRC4P0CG21 123 aaPredicted RBP14.05□□□□□ -0.16
RNF40-203ENST00000493683 H3BPC8 53 aa14.04□□□□□ -0.16
RNF40-203ENST00000493683 A8MTW9 85 aa14.03□□□□□ -0.16
RNF40-203ENST00000493683 RPS28P62857 69 aaKnown RBP14.03□□□□□ -0.16
RNF40-203ENST00000493683 PTPRSQ13332 1948 aa14.03□□□□□ -0.16
RNF40-203ENST00000493683 CPAMD8Q8IZJ3 1885 aa14.02□□□□□ -0.16
RNF40-203ENST00000493683 KIAA0087Q14695 138 aa14.02□□□□□ -0.16
RNF40-203ENST00000493683 PRLHP81277 87 aa14.02□□□□□ -0.17
RNF40-203ENST00000493683 SBSPONQ8IVN8 264 aa14.02□□□□□ -0.17
RNF40-203ENST00000493683 DEFB116Q30KQ4 102 aa14.01□□□□□ -0.17
RNF40-203ENST00000493683 ZFYVE26Q68DK2 2539 aa14.01□□□□□ -0.17
RNF40-203ENST00000493683 ABCA12Q86UK0 2595 aa14.01□□□□□ -0.17
RNF40-203ENST00000493683 SMIM29Q86T20 159 aa14□□□□□ -0.17
RNF40-203ENST00000493683 X6R8D5 127 aa14□□□□□ -0.17
RNF40-203ENST00000493683 H3BNG1 76 aa14□□□□□ -0.17
RNF40-203ENST00000493683 SPINK1P00995 79 aa13.99□□□□□ -0.17
RNF40-203ENST00000493683 RAI1Q7Z5J4 1906 aaPredicted RBP13.98□□□□□ -0.17
RNF40-203ENST00000493683 LOC110117498A0A087WWA1 95 aa13.98□□□□□ -0.17
RNF40-203ENST00000493683 RETNLBQ9BQ08 111 aa13.98□□□□□ -0.17
RNF40-203ENST00000493683 SMCPP49901 116 aaPredicted RBP13.97□□□□□ -0.17
RNF40-203ENST00000493683 PRO0461Q9UI25 63 aa13.97□□□□□ -0.17
RNF40-203ENST00000493683 ELOF1P60002 83 aaKnown RBP13.96□□□□□ -0.17
RNF40-203ENST00000493683 FHL3Q13643 280 aa13.96□□□□□ -0.18
RNF40-203ENST00000493683 ACYP2P14621 99 aa13.95□□□□□ -0.18
RNF40-203ENST00000493683 USP9XQ93008 2570 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms