RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 HTTP42858 3142 aa-0.83□□□□□ -2.54
SYCP1-208ENST00000493377 DIP2CQ9Y2E4 1556 aa-0.83□□□□□ -2.54
SYCP1-208ENST00000493377 XRN1Q8IZH2 1706 aaKnown RBP-0.84□□□□□ -2.54
SYCP1-208ENST00000493377 EHBP1L1Q8N3D4 1523 aa-0.84□□□□□ -2.54
SYCP1-208ENST00000493377 MRC2Q9UBG0 1479 aa-0.84□□□□□ -2.54
SYCP1-208ENST00000493377 H3BNG1 76 aa-0.84□□□□□ -2.54
SYCP1-208ENST00000493377 FGF7P21781 194 aa-0.84□□□□□ -2.54
SYCP1-208ENST00000493377 MT1HP80294 61 aa-0.84□□□□□ -2.54
SYCP1-208ENST00000493377 ARL11Q969Q4 196 aa-0.84□□□□□ -2.54
SYCP1-208ENST00000493377 FAIMQ9NVQ4 179 aa-0.84□□□□□ -2.54
SYCP1-208ENST00000493377 LINC00474Q9P2X8 69 aa-0.84□□□□□ -2.54
SYCP1-208ENST00000493377 DNAH2Q9P225 4427 aa-0.84□□□□□ -2.54
SYCP1-208ENST00000493377 ABCA13Q86UQ4 5058 aa-0.84□□□□□ -2.54
SYCP1-208ENST00000493377 WDR87Q6ZQQ6 2873 aa-0.84□□□□□ -2.54
SYCP1-208ENST00000493377 C1orf167Q5SNV9 1468 aa-0.85□□□□□ -2.55
SYCP1-208ENST00000493377 CHKB-CPT1BH3BT56 60 aa-0.85□□□□□ -2.55
SYCP1-208ENST00000493377 K7EP34 96 aa-0.85□□□□□ -2.55
SYCP1-208ENST00000493377 APOC2P02655 101 aa-0.85□□□□□ -2.55
SYCP1-208ENST00000493377 NAIPQ13075 1403 aa-0.85□□□□□ -2.55
SYCP1-208ENST00000493377 PDCD11Q14690 1871 aaKnown RBP-0.85□□□□□ -2.55
SYCP1-208ENST00000493377 LINC01600Q96MT4 127 aa-0.85□□□□□ -2.55
SYCP1-208ENST00000493377 SCN7AQ01118 1682 aa-0.85□□□□□ -2.55
SYCP1-208ENST00000493377 CUBNO60494 3623 aa-0.85□□□□□ -2.55
SYCP1-208ENST00000493377 MARF1Q9Y4F3 1742 aaKnown RBP-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 MIF4GDA9UHW6 222 aaKnown RBP-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 H0YAA0 97 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 SYS1-DBNDD2H3BUS1 97 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 IFNGP01579 166 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 MT1HL1P0DM35 61 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 CATR1Q13166 79 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 FAM223AQ8IWN6 122 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 UQCR10Q9UDW1 63 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 ANKRD36A6QL64 1941 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 SPG11Q96JI7 2443 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 FAT3Q8TDW7 4589 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 A2ML1A8K2U0 1454 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 ADGRL2O95490 1459 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 VPS13BQ7Z7G8 4022 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 KIAA1551Q9HCM1 1747 aa-0.86□□□□□ -2.55
SYCP1-208ENST00000493377 KNL1Q8NG31 2342 aa-0.87□□□□□ -2.55
SYCP1-208ENST00000493377 NDUFA2O43678 99 aa-0.87□□□□□ -2.55
SYCP1-208ENST00000493377 DEFB1P60022 68 aa-0.87□□□□□ -2.55
SYCP1-208ENST00000493377 UBA52P62987 128 aaKnown RBP-0.87□□□□□ -2.55
SYCP1-208ENST00000493377 PRO1933Q9H354 126 aa-0.87□□□□□ -2.55
SYCP1-208ENST00000493377 LINC00846Q9NV44 126 aa-0.87□□□□□ -2.55
SYCP1-208ENST00000493377 APLNQ9ULZ1 77 aa-0.87□□□□□ -2.55
SYCP1-208ENST00000493377 ANKRD11Q6UB99 2663 aaPredicted RBP-0.87□□□□□ -2.55
SYCP1-208ENST00000493377 ANKRD50Q9ULJ7 1429 aa-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 VPS13DQ5THJ4 4388 aa-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 COL12A1Q99715 3063 aa-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 LOC100130705A0A1B0GUX0 176 aa-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 CPSF4LA6NMK7 179 aaKnown RBP-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 FAM25AB3EWG3 89 aa-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 FAM25CB3EWG5 89 aa-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 FAM25GB3EWG6 89 aa-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 GNG7O60262 68 aa-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 ARL2-SNX15V9GYD0 113 aa-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 AKAP9Q99996 3911 aa-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 NKTRP30414 1462 aaKnown RBP-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 CCDC141Q6ZP82 1450 aa-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 AKAP13Q12802 2813 aa-0.88□□□□□ -2.55
SYCP1-208ENST00000493377 UBE2L5PA0A1B0GUS4 154 aa-0.89□□□□□ -2.55
SYCP1-208ENST00000493377 OOSP1A8MZH6 123 aa-0.89□□□□□ -2.55
SYCP1-208ENST00000493377 F6UZH7 168 aa-0.89□□□□□ -2.55
SYCP1-208ENST00000493377 UBE2D3P61077 147 aa-0.89□□□□□ -2.55
SYCP1-208ENST00000493377 UBE2D2P62837 147 aa-0.89□□□□□ -2.55
SYCP1-208ENST00000493377 UBE2L3P68036 154 aaKnown RBP-0.89□□□□□ -2.55
SYCP1-208ENST00000493377 H1FX-AS1Q4G0G2 97 aa-0.89□□□□□ -2.55
SYCP1-208ENST00000493377 C9orf62Q8N4C0 152 aa-0.89□□□□□ -2.55
SYCP1-208ENST00000493377 PLEKHH2Q8IVE3 1493 aa-0.89□□□□□ -2.55
SYCP1-208ENST00000493377 CUL7Q14999 1698 aa-0.89□□□□□ -2.55
SYCP1-208ENST00000493377 KNDC1Q76NI1 1749 aa-0.89□□□□□ -2.55
SYCP1-208ENST00000493377 PTPN23Q9H3S7 1636 aa-0.89□□□□□ -2.55
SYCP1-208ENST00000493377 KTN1Q86UP2 1357 aaKnown RBP-0.9□□□□□ -2.55
SYCP1-208ENST00000493377 K7EP13 123 aa-0.9□□□□□ -2.55
SYCP1-208ENST00000493377 ATP5EP56381 51 aaPredicted RBP-0.9□□□□□ -2.55
SYCP1-208ENST00000493377 KRTAP20-1Q3LI63 56 aa-0.9□□□□□ -2.55
SYCP1-208ENST00000493377 FDCSPQ8NFU4 85 aa-0.9□□□□□ -2.55
SYCP1-208ENST00000493377 LCN9Q8WX39 176 aa-0.9□□□□□ -2.55
SYCP1-208ENST00000493377 DPH3P1Q9H4G8 78 aa-0.9□□□□□ -2.55
SYCP1-208ENST00000493377 TEX15Q9BXT5 2789 aa-0.9□□□□□ -2.55
SYCP1-208ENST00000493377 RIF1Q5UIP0 2472 aaKnown RBP-0.9□□□□□ -2.55
SYCP1-208ENST00000493377 ANK3Q12955 4377 aaKnown RBP-0.9□□□□□ -2.55
SYCP1-208ENST00000493377 ACACAQ13085 2346 aa-0.9□□□□□ -2.55
SYCP1-208ENST00000493377 NBEAL2Q6ZNJ1 2754 aa-0.91□□□□□ -2.55
SYCP1-208ENST00000493377 ADAMTS12P58397 1594 aa-0.91□□□□□ -2.55
SYCP1-208ENST00000493377 NALCNQ8IZF0 1738 aa-0.91□□□□□ -2.55
SYCP1-208ENST00000493377 COX6CP09669 75 aa-0.91□□□□□ -2.56
SYCP1-208ENST00000493377 SAA2P0DJI9 122 aaPredicted RBP-0.91□□□□□ -2.56
SYCP1-208ENST00000493377 MT1XP80297 61 aa-0.91□□□□□ -2.56
SYCP1-208ENST00000493377 C1orf54Q8WWF1 131 aa-0.91□□□□□ -2.56
SYCP1-208ENST00000493377 PP6455Q8WZ26 134 aa-0.91□□□□□ -2.56
SYCP1-208ENST00000493377 TROQ12816 1431 aaPredicted RBP-0.91□□□□□ -2.56
SYCP1-208ENST00000493377 EDC4Q6P2E9 1401 aaKnown RBP-0.91□□□□□ -2.56
SYCP1-208ENST00000493377 COL4A6Q14031 1691 aa-0.91□□□□□ -2.56
SYCP1-208ENST00000493377 REV3LO60673 3130 aa-0.91□□□□□ -2.56
SYCP1-208ENST00000493377 LRRK2Q5S007 2527 aa-0.91□□□□□ -2.56
SYCP1-208ENST00000493377 LRRC37AA6NMS7 1700 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms