RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 LBHQ53QV2 105 aaPredicted RBP8.42□□□□□ -1.06
IRF1-210ENST00000493208 C10orf25Q5T742 122 aa8.42□□□□□ -1.06
IRF1-210ENST00000493208 MRPL18Q9H0U6 180 aaKnown RBP8.42□□□□□ -1.06
IRF1-210ENST00000493208 TINCRA0A1B0GVN0 87 aa8.41□□□□□ -1.06
IRF1-210ENST00000493208 RAB5BP61020 215 aa8.41□□□□□ -1.06
IRF1-210ENST00000493208 SRSF9Q13242 221 aaKnown RBP eCLIP8.41□□□□□ -1.06
IRF1-210ENST00000493208 LINC00173Q6ZV60 143 aa8.41□□□□□ -1.06
IRF1-210ENST00000493208 PHF5AQ7RTV0 110 aaKnown RBP8.41□□□□□ -1.06
IRF1-210ENST00000493208 MT1HL1P0DM35 61 aa8.4□□□□□ -1.06
IRF1-210ENST00000493208 PMVKQ15126 192 aa8.4□□□□□ -1.06
IRF1-210ENST00000493208 PDZD11Q5EBL8 140 aa8.4□□□□□ -1.06
IRF1-210ENST00000493208 C2orf82Q6UX34 121 aa8.4□□□□□ -1.06
IRF1-210ENST00000493208 CDKN2A-AS1Q9UH64 79 aa8.4□□□□□ -1.06
IRF1-210ENST00000493208 CARHSP1Q9Y2V2 147 aaKnown RBP8.4□□□□□ -1.06
IRF1-210ENST00000493208 LRP1Q07954 4544 aaKnown RBP8.4□□□□□ -1.07
IRF1-210ENST00000493208 SNAPINO95295 136 aa8.39□□□□□ -1.07
IRF1-210ENST00000493208 ODF1Q14990 250 aa8.39□□□□□ -1.07
IRF1-210ENST00000493208 LINC01546A6NGU7 62 aa8.38□□□□□ -1.07
IRF1-210ENST00000493208 IGLV7-43P04211 117 aa8.38□□□□□ -1.07
IRF1-210ENST00000493208 IFITM2Q01629 132 aa8.38□□□□□ -1.07
IRF1-210ENST00000493208 SFTA2Q6UW10 78 aa8.38□□□□□ -1.07
IRF1-210ENST00000493208 SVBPQ8N300 66 aa8.38□□□□□ -1.07
IRF1-210ENST00000493208 TRAPPC1Q9Y5R8 145 aa8.38□□□□□ -1.07
IRF1-210ENST00000493208 FAT3Q8TDW7 4589 aa8.37□□□□□ -1.07
IRF1-210ENST00000493208 NUPR1O60356 82 aa8.37□□□□□ -1.07
IRF1-210ENST00000493208 C10orf91Q5T1B1 145 aa8.37□□□□□ -1.07
IRF1-210ENST00000493208 ZC2HC1BQ5TFG8 222 aa8.37□□□□□ -1.07
IRF1-210ENST00000493208 COX7B2Q8TF08 81 aa8.37□□□□□ -1.07
IRF1-210ENST00000493208 CST9LQ9H4G1 147 aa8.37□□□□□ -1.07
IRF1-210ENST00000493208 ATP5LO75964 103 aa8.36□□□□□ -1.07
IRF1-210ENST00000493208 PKHD1L1Q86WI1 4243 aa8.35□□□□□ -1.07
IRF1-210ENST00000493208 FAM168BA1KXE4 195 aa8.35□□□□□ -1.07
IRF1-210ENST00000493208 HBDP02042 147 aa8.35□□□□□ -1.07
IRF1-210ENST00000493208 NDUFA6P56556 154 aa8.35□□□□□ -1.07
IRF1-210ENST00000493208 IGLV5-45A0A087WSX0 123 aa8.34□□□□□ -1.07
IRF1-210ENST00000493208 H0Y9J4 135 aa8.34□□□□□ -1.07
IRF1-210ENST00000493208 APOC3P02656 99 aa8.34□□□□□ -1.07
IRF1-210ENST00000493208 LINC00614P0C842 121 aa8.34□□□□□ -1.07
IRF1-210ENST00000493208 TP73-AS1Q9UF72 201 aa8.34□□□□□ -1.07
IRF1-210ENST00000493208 SMIM1B2RUZ4 78 aa8.33□□□□□ -1.08
IRF1-210ENST00000493208 RPL13AP40429 203 aaKnown RBP8.33□□□□□ -1.08
IRF1-210ENST00000493208 C9orf129Q5T035 196 aaKnown RBP8.33□□□□□ -1.08
IRF1-210ENST00000493208 IGLV1-50A0A075B6I6 118 aa8.32□□□□□ -1.08
IRF1-210ENST00000493208 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
IRF1-210ENST00000493208 NKAPP1Q8N9T2 125 aa8.32□□□□□ -1.08
IRF1-210ENST00000493208 C22orf24Q9Y442 160 aa8.32□□□□□ -1.08
IRF1-210ENST00000493208 RPL28P46779 137 aaKnown RBP8.31□□□□□ -1.08
IRF1-210ENST00000493208 MRPL55Q7Z7F7 128 aaKnown RBP8.31□□□□□ -1.08
IRF1-210ENST00000493208 XAGE1AQ9HD64 81 aa8.31□□□□□ -1.08
IRF1-210ENST00000493208 SPINK8P0C7L1 97 aa8.3□□□□□ -1.08
IRF1-210ENST00000493208 IGLC3P0DOY3 106 aa8.3□□□□□ -1.08
IRF1-210ENST00000493208 COX17Q14061 63 aa8.29□□□□□ -1.08
IRF1-210ENST00000493208 C18orf32Q8TCD1 76 aa8.29□□□□□ -1.08
IRF1-210ENST00000493208 ZNF861PO60384 105 aa8.28□□□□□ -1.08
IRF1-210ENST00000493208 RPL24P83731 157 aaKnown RBP8.28□□□□□ -1.08
IRF1-210ENST00000493208 BAGE3Q86Y29 109 aa8.27□□□□□ -1.09
IRF1-210ENST00000493208 CHCHD1Q96BP2 118 aaKnown RBP8.27□□□□□ -1.09
IRF1-210ENST00000493208 HMCN2Q8NDA2 5059 aa8.27□□□□□ -1.09
IRF1-210ENST00000493208 TMEM170BQ5T4T1 132 aa8.26□□□□□ -1.09
IRF1-210ENST00000493208 BCE1O60756 84 aa8.25□□□□□ -1.09
IRF1-210ENST00000493208 IGLV5-39A0A0G2JS06 123 aa8.24□□□□□ -1.09
IRF1-210ENST00000493208 LINC00587B1AMM8 73 aa8.24□□□□□ -1.09
IRF1-210ENST00000493208 ATP6V1G1O75348 118 aa8.24□□□□□ -1.09
IRF1-210ENST00000493208 UBE2AP49459 152 aa8.24□□□□□ -1.09
IRF1-210ENST00000493208 KRTAP7-1Q8IUC3 87 aa8.24□□□□□ -1.09
IRF1-210ENST00000493208 CHTOPQ9Y3Y2 248 aaKnown RBP8.24□□□□□ -1.09
IRF1-210ENST00000493208 IGLV5-37A0A075B6J1 123 aa8.23□□□□□ -1.09
IRF1-210ENST00000493208 HSBP1O75506 76 aa8.23□□□□□ -1.09
IRF1-210ENST00000493208 ZNF22P17026 224 aaPredicted RBP8.23□□□□□ -1.09
IRF1-210ENST00000493208 PFN2P35080 140 aa8.23□□□□□ -1.09
IRF1-210ENST00000493208 PRR26Q8N8Z3 221 aa8.23□□□□□ -1.09
IRF1-210ENST00000493208 ERG28Q9UKR5 140 aa8.23□□□□□ -1.09
IRF1-210ENST00000493208 TRAV12-1A0A0B4J245 112 aa8.21□□□□□ -1.1
IRF1-210ENST00000493208 PMCHL1Q16048 86 aa8.21□□□□□ -1.1
IRF1-210ENST00000493208 IFI27L1Q96BM0 104 aa8.21□□□□□ -1.1
IRF1-210ENST00000493208 LINC00167Q96N53 147 aa8.21□□□□□ -1.1
IRF1-210ENST00000493208 A0A096LNJ9 63 aa8.2□□□□□ -1.1
IRF1-210ENST00000493208 RPL37AP8A6NKH3 93 aa8.2□□□□□ -1.1
IRF1-210ENST00000493208 S100A12P80511 92 aa8.2□□□□□ -1.1
IRF1-210ENST00000493208 KRTAP11-1Q8IUC1 163 aa8.2□□□□□ -1.1
IRF1-210ENST00000493208 GAGE10A6NGK3 116 aa8.19□□□□□ -1.1
IRF1-210ENST00000493208 CRYGAP11844 174 aa8.19□□□□□ -1.1
IRF1-210ENST00000493208 MAP1LC3CQ9BXW4 147 aa8.19□□□□□ -1.1
IRF1-210ENST00000493208 C11orf86A6NJI1 115 aa8.18□□□□□ -1.1
IRF1-210ENST00000493208 LINC00158P58513 81 aa8.18□□□□□ -1.1
IRF1-210ENST00000493208 HERV-K104P63124 156 aa8.18□□□□□ -1.1
IRF1-210ENST00000493208 URB1-AS1Q96HZ7 61 aa8.18□□□□□ -1.1
IRF1-210ENST00000493208 SND1-IT1Q9HBX3 110 aa8.18□□□□□ -1.1
IRF1-210ENST00000493208 TNXBP22105 4242 aa8.17□□□□□ -1.1
IRF1-210ENST00000493208 IGKV2-28A0A075B6P5 120 aa8.16□□□□□ -1.1
IRF1-210ENST00000493208 IGKV2D-28P01615 120 aa8.16□□□□□ -1.1
IRF1-210ENST00000493208 KRTAP1-4P0C5Y4 121 aa8.16□□□□□ -1.1
IRF1-210ENST00000493208 MEIG1Q5JSS6 88 aa8.16□□□□□ -1.1
IRF1-210ENST00000493208 ZNF625Q96I27 306 aaPredicted RBP8.16□□□□□ -1.1
IRF1-210ENST00000493208 HSPB8Q9UJY1 196 aa8.16□□□□□ -1.1
IRF1-210ENST00000493208 HERVK_113P61574 105 aa8.15□□□□□ -1.1
IRF1-210ENST00000493208 MYMXA0A1B0GTQ4 84 aa8.14□□□□□ -1.11
IRF1-210ENST00000493208 TMEM223A0PJW6 202 aa8.14□□□□□ -1.11
IRF1-210ENST00000493208 LEPROTL1O95214 131 aa8.14□□□□□ -1.11
IRF1-210ENST00000493208 PLNP26678 52 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms