RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 TSHBP01222 138 aa6.42□□□□□ -1.38
CSTF1-206ENST00000493039 IFI27P40305 119 aaPredicted RBP6.42□□□□□ -1.38
CSTF1-206ENST00000493039 SMIM2Q9BVW6 85 aa6.42□□□□□ -1.38
CSTF1-206ENST00000493039 hDV102S1A0JD36 115 aa6.42□□□□□ -1.38
CSTF1-206ENST00000493039 CEND1Q8N111 149 aa6.42□□□□□ -1.38
CSTF1-206ENST00000493039 IMUPQ9GZP8 106 aa6.42□□□□□ -1.38
CSTF1-206ENST00000493039 LINC00588Q9Y4M8 146 aa6.42□□□□□ -1.38
CSTF1-206ENST00000493039 HYDINQ4G0P3 5121 aa6.41□□□□□ -1.38
CSTF1-206ENST00000493039 I3L3M4 83 aa6.41□□□□□ -1.38
CSTF1-206ENST00000493039 ALMS1Q8TCU4 4167 aa6.41□□□□□ -1.38
CSTF1-206ENST00000493039 TRBV6-8A0A0A6YYG3 113 aa6.41□□□□□ -1.38
CSTF1-206ENST00000493039 TCL1BO95988 128 aa6.41□□□□□ -1.38
CSTF1-206ENST00000493039 A0A0A0MQY5 61 aa6.4□□□□□ -1.38
CSTF1-206ENST00000493039 Q8N8P6 123 aa6.4□□□□□ -1.38
CSTF1-206ENST00000493039 CHCHD7Q9BUK0 85 aa6.4□□□□□ -1.38
CSTF1-206ENST00000493039 LAMTOR3Q9UHA4 124 aa6.4□□□□□ -1.38
CSTF1-206ENST00000493039 LINC01546A6NGU7 62 aa6.4□□□□□ -1.39
CSTF1-206ENST00000493039 C8orf87E5RJ46 101 aa6.4□□□□□ -1.39
CSTF1-206ENST00000493039 Q8N3U1 123 aa6.4□□□□□ -1.39
CSTF1-206ENST00000493039 DNAH2Q9P225 4427 aa6.39□□□□□ -1.39
CSTF1-206ENST00000493039 LELP1Q5T871 98 aa6.39□□□□□ -1.39
CSTF1-206ENST00000493039 SMIM26A0A096LP01 95 aa6.38□□□□□ -1.39
CSTF1-206ENST00000493039 WFDC10BQ8IUB3 73 aa6.38□□□□□ -1.39
CSTF1-206ENST00000493039 IGKCP01834 107 aa6.38□□□□□ -1.39
CSTF1-206ENST00000493039 CCL18P55774 89 aa6.38□□□□□ -1.39
CSTF1-206ENST00000493039 FAM19A2Q8N3H0 131 aa6.38□□□□□ -1.39
CSTF1-206ENST00000493039 PRSS3P2Q8NHM4 247 aa6.38□□□□□ -1.39
CSTF1-206ENST00000493039 NXT2Q9NPJ8 142 aaKnown RBP6.38□□□□□ -1.39
CSTF1-206ENST00000493039 DNAH10Q8IVF4 4471 aa6.38□□□□□ -1.39
CSTF1-206ENST00000493039 A0A096LNJ9 63 aa6.37□□□□□ -1.39
CSTF1-206ENST00000493039 hADV29S1A0JD25 119 aa6.37□□□□□ -1.39
CSTF1-206ENST00000493039 NDUFC2-KCTD14E9PQ53 114 aa6.37□□□□□ -1.39
CSTF1-206ENST00000493039 UPK3BQ9BT76 320 aa6.37□□□□□ -1.39
CSTF1-206ENST00000493039 TRBV25-1A0A075B6N4 114 aa6.37□□□□□ -1.39
CSTF1-206ENST00000493039 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.37□□□□□ -1.39
CSTF1-206ENST00000493039 IGHV1-24A0A0C4DH33 117 aa6.37□□□□□ -1.39
CSTF1-206ENST00000493039 IGKV2-29A2NJV5 120 aaPredicted RBP6.37□□□□□ -1.39
CSTF1-206ENST00000493039 H3BT86 120 aa6.37□□□□□ -1.39
CSTF1-206ENST00000493039 RPL39P62891 51 aaKnown RBP6.37□□□□□ -1.39
CSTF1-206ENST00000493039 C20orf203Q8NBC4 194 aa6.37□□□□□ -1.39
CSTF1-206ENST00000493039 FAM104AQ969W3 186 aa6.37□□□□□ -1.39
CSTF1-206ENST00000493039 SERP1Q9Y6X1 66 aa6.37□□□□□ -1.39
CSTF1-206ENST00000493039 DNAH6Q9C0G6 4158 aa6.36□□□□□ -1.39
CSTF1-206ENST00000493039 FCER1GP30273 86 aa6.36□□□□□ -1.39
CSTF1-206ENST00000493039 LGALS9CQ6DKI2 356 aa6.36□□□□□ -1.39
CSTF1-206ENST00000493039 LAGE3Q14657 143 aa6.35□□□□□ -1.39
CSTF1-206ENST00000493039 LINC00476Q8WZB0 136 aa6.35□□□□□ -1.39
CSTF1-206ENST00000493039 TMEM243Q9BU79 118 aa6.35□□□□□ -1.39
CSTF1-206ENST00000493039 AP5S1Q9NUS5 200 aa6.35□□□□□ -1.39
CSTF1-206ENST00000493039 TRBV7-6A0A0J9YX20 115 aa6.35□□□□□ -1.39
CSTF1-206ENST00000493039 K7EMI3 77 aa6.35□□□□□ -1.39
CSTF1-206ENST00000493039 RYR2Q92736 4967 aa6.35□□□□□ -1.39
CSTF1-206ENST00000493039 KRTAP1-5Q9BYS1 174 aa6.34□□□□□ -1.39
CSTF1-206ENST00000493039 IGLV4-60A0A075B6I1 120 aa6.34□□□□□ -1.39
CSTF1-206ENST00000493039 DNAH10OSP0CZ25 163 aa6.34□□□□□ -1.39
CSTF1-206ENST00000493039 NPC2P61916 151 aa6.34□□□□□ -1.39
CSTF1-206ENST00000493039 ORMDL2Q53FV1 153 aa6.34□□□□□ -1.39
CSTF1-206ENST00000493039 SRSF9Q13242 221 aaKnown RBP eCLIP6.33□□□□□ -1.4
CSTF1-206ENST00000493039 LINC01556Q5JQF7 62 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 C2orf66Q6UXQ4 117 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 FP248Q71RG6 208 aaPredicted RBP6.33□□□□□ -1.4
CSTF1-206ENST00000493039 UBE2DNLQ8IWF7 75 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 CHCHD1Q96BP2 118 aaKnown RBP6.33□□□□□ -1.4
CSTF1-206ENST00000493039 OPRPNQ99935 248 aaPredicted RBP6.33□□□□□ -1.4
CSTF1-206ENST00000493039 CYSTM1Q9H1C7 97 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 HIGD1BQ9P298 99 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 UBE2D4Q9Y2X8 147 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 A0A1B0GUV1 79 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 IGIPA6NJ69 53 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 LY6G6CO95867 125 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 IGHV3-30P01768 117 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 IGHV3-33P01772 117 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 IGHV3-30-3P0DP02 117 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 IGHV3-30-5P0DP03 117 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 TOMM6Q96B49 74 aa6.33□□□□□ -1.4
CSTF1-206ENST00000493039 RYR3Q15413 4870 aa6.32□□□□□ -1.4
CSTF1-206ENST00000493039 H7C423 109 aa6.32□□□□□ -1.4
CSTF1-206ENST00000493039 FXYD2P54710 66 aa6.32□□□□□ -1.4
CSTF1-206ENST00000493039 K7ERJ3 54 aa6.31□□□□□ -1.4
CSTF1-206ENST00000493039 SCGB1C2P0DMR2 95 aa6.31□□□□□ -1.4
CSTF1-206ENST00000493039 LINC00173Q6ZV60 143 aa6.31□□□□□ -1.4
CSTF1-206ENST00000493039 TIMM21Q9BVV7 248 aa6.31□□□□□ -1.4
CSTF1-206ENST00000493039 CDC42SE2Q9NRR3 84 aa6.31□□□□□ -1.4
CSTF1-206ENST00000493039 UBE2L6O14933 153 aa6.3□□□□□ -1.4
CSTF1-206ENST00000493039 TRAV8-4A0A0B4J246 113 aa6.3□□□□□ -1.4
CSTF1-206ENST00000493039 ATOX1O00244 68 aa6.3□□□□□ -1.4
CSTF1-206ENST00000493039 HBDP02042 147 aa6.3□□□□□ -1.4
CSTF1-206ENST00000493039 RNASE13Q5GAN3 156 aaKnown RBP6.3□□□□□ -1.4
CSTF1-206ENST00000493039 LINC01545Q5VT33 79 aa6.3□□□□□ -1.4
CSTF1-206ENST00000493039 KLK12Q9UKR0 248 aa6.3□□□□□ -1.4
CSTF1-206ENST00000493039 DNAH17Q9UFH2 4485 aa6.3□□□□□ -1.4
CSTF1-206ENST00000493039 IGLV4-3A0A075B6K6 122 aa6.29□□□□□ -1.4
CSTF1-206ENST00000493039 NBDYA0A0U1RRE5 68 aa6.29□□□□□ -1.4
CSTF1-206ENST00000493039 LCE6AA0A183 80 aa6.29□□□□□ -1.4
CSTF1-206ENST00000493039 PAPPA-AS1Q5QFB9 102 aa6.29□□□□□ -1.4
CSTF1-206ENST00000493039 ENHOQ6UWT2 76 aa6.29□□□□□ -1.4
CSTF1-206ENST00000493039 Q6ZR54 194 aa6.29□□□□□ -1.4
CSTF1-206ENST00000493039 LINC00269Q8N2A0 174 aa6.29□□□□□ -1.4
CSTF1-206ENST00000493039 PRR34Q9NV39 138 aa6.29□□□□□ -1.4
CSTF1-206ENST00000493039 NHP2Q9NX24 153 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms