RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 ENHOQ6UWT2 76 aa6.2□□□□□ -1.42
SMARCC1-208ENST00000492896 GTF2H5Q6ZYL4 71 aa6.2□□□□□ -1.42
SMARCC1-208ENST00000492896 UBE2WQ96B02 151 aa6.2□□□□□ -1.42
SMARCC1-208ENST00000492896 PGPEP1Q9NXJ5 209 aa6.2□□□□□ -1.42
SMARCC1-208ENST00000492896 A0A0U1RRA0 63 aa6.19□□□□□ -1.42
SMARCC1-208ENST00000492896 GAGE10A6NGK3 116 aa6.19□□□□□ -1.42
SMARCC1-208ENST00000492896 TSPAN13O95857 204 aa6.19□□□□□ -1.42
SMARCC1-208ENST00000492896 C6orf226Q5I0X4 101 aa6.19□□□□□ -1.42
SMARCC1-208ENST00000492896 DAND5Q8N907 189 aa6.19□□□□□ -1.42
SMARCC1-208ENST00000492896 LINC00308Q8TCZ7 52 aa6.19□□□□□ -1.42
SMARCC1-208ENST00000492896 PPDPFQ9H3Y8 114 aa6.19□□□□□ -1.42
SMARCC1-208ENST00000492896 PRO1854Q9UHT4 67 aa6.19□□□□□ -1.42
SMARCC1-208ENST00000492896 SPCS1Q9Y6A9 102 aa6.19□□□□□ -1.42
SMARCC1-208ENST00000492896 MGAM2Q2M2H8 2515 aa6.19□□□□□ -1.42
SMARCC1-208ENST00000492896 IBA57-AS1B1ANH7 110 aa6.18□□□□□ -1.42
SMARCC1-208ENST00000492896 LYRM7Q5U5X0 104 aa6.18□□□□□ -1.42
SMARCC1-208ENST00000492896 NBEAL1Q6ZS30 2694 aa6.17□□□□□ -1.42
SMARCC1-208ENST00000492896 EIF4EBP3O60516 100 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-208ENST00000492896 NHLRC4P0CG21 123 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-208ENST00000492896 DNAH10OSP0CZ25 163 aa6.17□□□□□ -1.42
SMARCC1-208ENST00000492896 CCL18P55774 89 aa6.17□□□□□ -1.42
SMARCC1-208ENST00000492896 LINC00158P58513 81 aa6.17□□□□□ -1.42
SMARCC1-208ENST00000492896 CKS1BP61024 79 aa6.17□□□□□ -1.42
SMARCC1-208ENST00000492896 SPAG11BQ08648 103 aa6.17□□□□□ -1.42
SMARCC1-208ENST00000492896 SOSTDC1Q6X4U4 206 aa6.17□□□□□ -1.42
SMARCC1-208ENST00000492896 MIR7-3HGQ8N6C7 128 aa6.17□□□□□ -1.42
SMARCC1-208ENST00000492896 ERG28Q9UKR5 140 aa6.17□□□□□ -1.42
SMARCC1-208ENST00000492896 KLK5Q9Y337 293 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-208ENST00000492896 DYNC2H1Q8NCM8 4307 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-208ENST00000492896 KIAA0087Q14695 138 aa6.16□□□□□ -1.42
SMARCC1-208ENST00000492896 LINC00588Q9Y4M8 146 aa6.16□□□□□ -1.42
SMARCC1-208ENST00000492896 PFN2P35080 140 aa6.15□□□□□ -1.42
SMARCC1-208ENST00000492896 Q1RN00 199 aa6.15□□□□□ -1.42
SMARCC1-208ENST00000492896 C2orf82Q6UX34 121 aa6.15□□□□□ -1.42
SMARCC1-208ENST00000492896 UPK3BQ9BT76 320 aa6.15□□□□□ -1.42
SMARCC1-208ENST00000492896 C1orf43Q9BWL3 253 aa6.15□□□□□ -1.42
SMARCC1-208ENST00000492896 LOC107984156A0A0G2JMH3 177 aa6.14□□□□□ -1.43
SMARCC1-208ENST00000492896 H7C2G1 150 aa6.14□□□□□ -1.43
SMARCC1-208ENST00000492896 RPL13AP40429 203 aaKnown RBP6.14□□□□□ -1.43
SMARCC1-208ENST00000492896 KRTAP21-3Q3LHN1 58 aa6.14□□□□□ -1.43
SMARCC1-208ENST00000492896 KRTAP26-1Q6PEX3 210 aa6.14□□□□□ -1.43
SMARCC1-208ENST00000492896 ARL17AQ8IVW1 177 aa6.14□□□□□ -1.43
SMARCC1-208ENST00000492896 IGKV2D-24A0A075B6R9 120 aa6.13□□□□□ -1.43
SMARCC1-208ENST00000492896 PSMB2P49721 201 aa6.13□□□□□ -1.43
SMARCC1-208ENST00000492896 COX17Q14061 63 aa6.13□□□□□ -1.43
SMARCC1-208ENST00000492896 Q9HAA7 133 aa6.12□□□□□ -1.43
SMARCC1-208ENST00000492896 SND1-IT1Q9HBX3 110 aa6.12□□□□□ -1.43
SMARCC1-208ENST00000492896 DNAH1Q9P2D7 4330 aa6.12□□□□□ -1.43
SMARCC1-208ENST00000492896 NUPR2A6NF83 97 aa6.11□□□□□ -1.43
SMARCC1-208ENST00000492896 SCGB1C2P0DMR2 95 aa6.11□□□□□ -1.43
SMARCC1-208ENST00000492896 UBE2DNLQ8IWF7 75 aa6.11□□□□□ -1.43
SMARCC1-208ENST00000492896 C6orf223Q8N319 242 aa6.11□□□□□ -1.43
SMARCC1-208ENST00000492896 MUC7Q8TAX7 377 aa6.11□□□□□ -1.43
SMARCC1-208ENST00000492896 NTN5Q8WTR8 489 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-208ENST00000492896 RMI2Q96E14 147 aa6.11□□□□□ -1.43
SMARCC1-208ENST00000492896 TRBV20-1A0A075B6N2 111 aa6.1□□□□□ -1.43
SMARCC1-208ENST00000492896 GVQW2A0A096LPI5 108 aaPredicted RBP6.1□□□□□ -1.43
SMARCC1-208ENST00000492896 TRAV13-2A0A0B4J235 113 aa6.1□□□□□ -1.43
SMARCC1-208ENST00000492896 TRBV30A0A0K0K1B3 111 aa6.1□□□□□ -1.43
SMARCC1-208ENST00000492896 ZNF561-AS1K7EIQ3 104 aa6.1□□□□□ -1.43
SMARCC1-208ENST00000492896 TRIAP1O43715 76 aa6.1□□□□□ -1.43
SMARCC1-208ENST00000492896 HIGD2BQ4VC39 106 aa6.1□□□□□ -1.43
SMARCC1-208ENST00000492896 UNQ6190/PRO20217Q6UXQ8 127 aa6.1□□□□□ -1.43
SMARCC1-208ENST00000492896 C15orf56Q8N910 161 aa6.1□□□□□ -1.43
SMARCC1-208ENST00000492896 LINC00526Q96FQ7 95 aa6.1□□□□□ -1.43
SMARCC1-208ENST00000492896 APLNQ9ULZ1 77 aa6.1□□□□□ -1.43
SMARCC1-208ENST00000492896 DNHD1Q96M86 4753 aa6.09□□□□□ -1.43
SMARCC1-208ENST00000492896 H3BMG7 143 aa6.09□□□□□ -1.43
SMARCC1-208ENST00000492896 TCL1BO95988 128 aa6.09□□□□□ -1.43
SMARCC1-208ENST00000492896 COX6CP09669 75 aa6.09□□□□□ -1.43
SMARCC1-208ENST00000492896 C10orf25Q5T742 122 aa6.09□□□□□ -1.43
SMARCC1-208ENST00000492896 C2orf48Q96LS8 159 aa6.09□□□□□ -1.43
SMARCC1-208ENST00000492896 CAMK2N2Q96S95 79 aa6.09□□□□□ -1.43
SMARCC1-208ENST00000492896 F8WDY8 70 aa6.08□□□□□ -1.44
SMARCC1-208ENST00000492896 C9orf116Q5BN46 136 aaPredicted RBP6.08□□□□□ -1.44
SMARCC1-208ENST00000492896 C6orf48Q9UBA6 75 aa6.08□□□□□ -1.44
SMARCC1-208ENST00000492896 PRKDCP78527 4128 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-208ENST00000492896 IGKV2-28A0A075B6P5 120 aa6.07□□□□□ -1.44
SMARCC1-208ENST00000492896 NDUFC2O95298 119 aa6.07□□□□□ -1.44
SMARCC1-208ENST00000492896 IGKV2D-28P01615 120 aa6.07□□□□□ -1.44
SMARCC1-208ENST00000492896 ATXN8Q156A1 80 aa6.07□□□□□ -1.44
SMARCC1-208ENST00000492896 LINC00337Q8N6G1 96 aa6.07□□□□□ -1.44
SMARCC1-208ENST00000492896 F8W1H4 67 aa6.06□□□□□ -1.44
SMARCC1-208ENST00000492896 Q6ZRU5 148 aa6.05□□□□□ -1.44
SMARCC1-208ENST00000492896 MTURNQ8N3F0 131 aa6.05□□□□□ -1.44
SMARCC1-208ENST00000492896 PRO0461Q9UI25 63 aa6.05□□□□□ -1.44
SMARCC1-208ENST00000492896 DNAH7Q8WXX0 4024 aa6.05□□□□□ -1.44
SMARCC1-208ENST00000492896 COL7A1Q02388 2944 aa6.04□□□□□ -1.44
SMARCC1-208ENST00000492896 USP17L23D6RBM5 183 aa6.04□□□□□ -1.44
SMARCC1-208ENST00000492896 RPL28P46779 137 aaKnown RBP6.04□□□□□ -1.44
SMARCC1-208ENST00000492896 SYCNQ0VAF6 134 aa6.04□□□□□ -1.44
SMARCC1-208ENST00000492896 OR13C6PQ8NH95 151 aa6.04□□□□□ -1.44
SMARCC1-208ENST00000492896 STAB2Q8WWQ8 2551 aa6.03□□□□□ -1.44
SMARCC1-208ENST00000492896 LST1O00453 97 aa6.03□□□□□ -1.44
SMARCC1-208ENST00000492896 WFDC2Q14508 124 aa6.03□□□□□ -1.44
SMARCC1-208ENST00000492896 PLECQ15149 4684 aaKnown RBP6.03□□□□□ -1.44
SMARCC1-208ENST00000492896 LINC01620Q4KN68 170 aa6.03□□□□□ -1.44
SMARCC1-208ENST00000492896 CASC10Q5T4H9 136 aa6.03□□□□□ -1.44
SMARCC1-208ENST00000492896 SMIM11BQ8TCY0 68 aa6.03□□□□□ -1.44
SMARCC1-208ENST00000492896 CLEC2BQ92478 149 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 214.5 ms