RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	MRPL35	Q9NZE8	188 aa	Known RBP	9.42	□□□□□ -0.9
MRPL55-231	ENST00000492170		A0A087WZ39	114 aa		9.41	□□□□□ -0.9
MRPL55-231	ENST00000492170	NDUFA1	O15239	70 aa		9.41	□□□□□ -0.9
MRPL55-231	ENST00000492170	C1orf137	Q5JT78	98 aa		9.41	□□□□□ -0.9
MRPL55-231	ENST00000492170	SCGB3A1	Q96QR1	104 aa		9.41	□□□□□ -0.9
MRPL55-231	ENST00000492170	COLCA2	A8K830	154 aa		9.4	□□□□□ -0.9
MRPL55-231	ENST00000492170	RAB5B	P61020	215 aa		9.4	□□□□□ -0.9
MRPL55-231	ENST00000492170	LINC01561	Q8N1V8	128 aa		9.39	□□□□□ -0.91
MRPL55-231	ENST00000492170	HBD	P02042	147 aa		9.38	□□□□□ -0.91
MRPL55-231	ENST00000492170	TRGC2	P03986	189 aa		9.38	□□□□□ -0.91
MRPL55-231	ENST00000492170	TLX1NB	P0CAT3	122 aa		9.37	□□□□□ -0.91
MRPL55-231	ENST00000492170	SEC11A	P67812	179 aa		9.37	□□□□□ -0.91
MRPL55-231	ENST00000492170	PDZD11	Q5EBL8	140 aa		9.37	□□□□□ -0.91
MRPL55-231	ENST00000492170	DIRC1	Q969H9	104 aa		9.37	□□□□□ -0.91
MRPL55-231	ENST00000492170	CHCHD1	Q96BP2	118 aa	Known RBP	9.37	□□□□□ -0.91
MRPL55-231	ENST00000492170	HERVK_113	P63121	156 aa		9.36	□□□□□ -0.91
MRPL55-231	ENST00000492170	C10orf25	Q5T742	122 aa		9.36	□□□□□ -0.91
MRPL55-231	ENST00000492170	UNQ6190/PRO20217	Q6UXQ8	127 aa		9.36	□□□□□ -0.91
MRPL55-231	ENST00000492170	C6orf48	Q9UBA6	75 aa		9.36	□□□□□ -0.91
MRPL55-231	ENST00000492170	IGLV7-43	P04211	117 aa		9.35	□□□□□ -0.91
MRPL55-231	ENST00000492170	KIAA0087	Q14695	138 aa		9.35	□□□□□ -0.91
MRPL55-231	ENST00000492170	PMVK	Q15126	192 aa		9.35	□□□□□ -0.91
MRPL55-231	ENST00000492170	PMCHL1	Q16048	86 aa		9.35	□□□□□ -0.91
MRPL55-231	ENST00000492170	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	9.35	□□□□□ -0.91
MRPL55-231	ENST00000492170	CST9L	Q9H4G1	147 aa		9.35	□□□□□ -0.91
MRPL55-231	ENST00000492170	TINCR	A0A1B0GVN0	87 aa		9.34	□□□□□ -0.91
MRPL55-231	ENST00000492170	FAM168B	A1KXE4	195 aa		9.34	□□□□□ -0.91
MRPL55-231	ENST00000492170	SCO1	O75880	301 aa		9.34	□□□□□ -0.91
MRPL55-231	ENST00000492170	GAGE2E	Q4V326	116 aa		9.34	□□□□□ -0.91
MRPL55-231	ENST00000492170	GAGE2D	Q9UEU5	116 aa		9.34	□□□□□ -0.91
MRPL55-231	ENST00000492170	CDKN2A-AS1	Q9UH64	79 aa		9.34	□□□□□ -0.91
MRPL55-231	ENST00000492170	IGLV5-45	A0A087WSX0	123 aa		9.33	□□□□□ -0.92
MRPL55-231	ENST00000492170		H0Y9J4	135 aa		9.32	□□□□□ -0.92
MRPL55-231	ENST00000492170	ATP5L	O75964	103 aa		9.32	□□□□□ -0.92
MRPL55-231	ENST00000492170	GEMIN7	Q9H840	131 aa	Known RBP	9.32	□□□□□ -0.92
MRPL55-231	ENST00000492170	TRBV30	A0A0K0K1B3	111 aa		9.31	□□□□□ -0.92
MRPL55-231	ENST00000492170		M0QXV9	152 aa		9.31	□□□□□ -0.92
MRPL55-231	ENST00000492170	LINC00310	P59036	64 aa		9.31	□□□□□ -0.92
MRPL55-231	ENST00000492170	UBE2B	P63146	152 aa		9.31	□□□□□ -0.92
MRPL55-231	ENST00000492170	BAGE3	Q86Y29	109 aa		9.31	□□□□□ -0.92
MRPL55-231	ENST00000492170	PRR26	Q8N8Z3	221 aa		9.31	□□□□□ -0.92
MRPL55-231	ENST00000492170	PACRG	Q96M98	296 aa	Predicted RBP	9.31	□□□□□ -0.92
MRPL55-231	ENST00000492170	IGLC3	P0DOY3	106 aa		9.3	□□□□□ -0.92
MRPL55-231	ENST00000492170	KRTAP11-1	Q8IUC1	163 aa		9.3	□□□□□ -0.92
MRPL55-231	ENST00000492170		Q8IZM0	81 aa		9.3	□□□□□ -0.92
MRPL55-231	ENST00000492170	SMIM1	B2RUZ4	78 aa		9.29	□□□□□ -0.92
MRPL55-231	ENST00000492170	NDUFC2-KCTD14	E9PQ53	114 aa		9.29	□□□□□ -0.92
MRPL55-231	ENST00000492170	HSBP1	O75506	76 aa		9.29	□□□□□ -0.92
MRPL55-231	ENST00000492170	LINC00469	Q8N7U9	141 aa		9.29	□□□□□ -0.92
MRPL55-231	ENST00000492170	SERF1A	O75920	110 aa		9.28	□□□□□ -0.92
MRPL55-231	ENST00000492170	C2orf82	Q6UX34	121 aa		9.28	□□□□□ -0.92
MRPL55-231	ENST00000492170	IGLV1-50	A0A075B6I6	118 aa		9.27	□□□□□ -0.93
MRPL55-231	ENST00000492170	KRTAP7-1	Q8IUC3	87 aa		9.27	□□□□□ -0.93
MRPL55-231	ENST00000492170	LPA	P08519	4548 aa		9.27	□□□□□ -0.93
MRPL55-231	ENST00000492170	PRSS2	P07478	247 aa		9.26	□□□□□ -0.93
MRPL55-231	ENST00000492170	FAM19A2	Q8N3H0	131 aa		9.26	□□□□□ -0.93
MRPL55-231	ENST00000492170	IFI27L1	Q96BM0	104 aa		9.26	□□□□□ -0.93
MRPL55-231	ENST00000492170	TRAV12-1	A0A0B4J245	112 aa		9.25	□□□□□ -0.93
MRPL55-231	ENST00000492170	ZNF22	P17026	224 aa	Predicted RBP	9.25	□□□□□ -0.93
MRPL55-231	ENST00000492170	NDUFA6	P56556	154 aa		9.25	□□□□□ -0.93
MRPL55-231	ENST00000492170	C9orf129	Q5T035	196 aa	Known RBP	9.25	□□□□□ -0.93
MRPL55-231	ENST00000492170	TOMM7	Q9P0U1	55 aa		9.25	□□□□□ -0.93
MRPL55-231	ENST00000492170	NUPR1	O60356	82 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	HIST1H2BK	O60814	126 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	HIST1H2BJ	P06899	126 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	KRTAP1-4	P0C5Y4	121 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	HIST1H2BO	P23527	126 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	HIST1H2BB	P33778	126 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	CXCL5	P42830	114 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	HIST1H2BD	P58876	126 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	CKS1B	P61024	79 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	HIST1H2BC	P62807	126 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	HIST2H2BE	Q16778	126 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	HIST1H2BH	Q93079	126 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	HIST1H2BN	Q99877	126 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	HIST1H2BM	Q99879	126 aa		9.24	□□□□□ -0.93
MRPL55-231	ENST00000492170	IGLV5-39	A0A0G2JS06	123 aa		9.23	□□□□□ -0.93
MRPL55-231	ENST00000492170	C11orf86	A6NJI1	115 aa		9.23	□□□□□ -0.93
MRPL55-231	ENST00000492170		H3BRM9	83 aa		9.23	□□□□□ -0.93
MRPL55-231	ENST00000492170	S100A1	P23297	94 aa		9.23	□□□□□ -0.93
MRPL55-231	ENST00000492170	C6orf226	Q5I0X4	101 aa		9.23	□□□□□ -0.93
MRPL55-231	ENST00000492170		F8VRH5	84 aa		9.22	□□□□□ -0.93
MRPL55-231	ENST00000492170	LEPROTL1	O95214	131 aa		9.22	□□□□□ -0.93
MRPL55-231	ENST00000492170	SPINK8	P0C7L1	97 aa		9.22	□□□□□ -0.93
MRPL55-231	ENST00000492170	RPL13A	P40429	203 aa	Known RBP	9.22	□□□□□ -0.93
MRPL55-231	ENST00000492170	COX7B2	Q8TF08	81 aa		9.22	□□□□□ -0.93
MRPL55-231	ENST00000492170	CHTOP	Q9Y3Y2	248 aa	Known RBP	9.22	□□□□□ -0.93
MRPL55-231	ENST00000492170	ATP6V1G1	O75348	118 aa		9.21	□□□□□ -0.94
MRPL55-231	ENST00000492170	ZNF861P	O60384	105 aa		9.19	□□□□□ -0.94
MRPL55-231	ENST00000492170	LBH	Q53QV2	105 aa	Predicted RBP	9.19	□□□□□ -0.94
MRPL55-231	ENST00000492170	C22orf24	Q9Y442	160 aa		9.19	□□□□□ -0.94
MRPL55-231	ENST00000492170	XAGE1A	Q9HD64	81 aa		9.18	□□□□□ -0.94
MRPL55-231	ENST00000492170	HSPB8	Q9UJY1	196 aa		9.18	□□□□□ -0.94
MRPL55-231	ENST00000492170	COA6	Q5JTJ3	125 aa	Known RBP	9.17	□□□□□ -0.94
MRPL55-231	ENST00000492170	TMEM170B	Q5T4T1	132 aa		9.17	□□□□□ -0.94
MRPL55-231	ENST00000492170	TMEM223	A0PJW6	202 aa		9.16	□□□□□ -0.94
MRPL55-231	ENST00000492170	PRR4	Q16378	134 aa		9.16	□□□□□ -0.94
MRPL55-231	ENST00000492170	FABP4	P15090	132 aa		9.15	□□□□□ -0.94
MRPL55-231	ENST00000492170	TP73-AS1	Q9UF72	201 aa		9.15	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 429.6 ms