RNA–Protein interactions for RNA: ENST00000491769.1

COL6A3-212, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5

Gene COL6A3, Length 6,731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-212ENST00000491769 CEP192Q8TEP8 1941 aa9.36□□□□□ -0.91
COL6A3-212ENST00000491769 CRIP3Q6Q6R5 217 aa9.36□□□□□ -0.91
COL6A3-212ENST00000491769 SMIM1B2RUZ4 78 aa9.35□□□□□ -0.91
COL6A3-212ENST00000491769 C16orf90A8MZG2 172 aa9.34□□□□□ -0.91
COL6A3-212ENST00000491769 EXPH5Q8NEV8 1989 aa9.34□□□□□ -0.91
COL6A3-212ENST00000491769 HCG22E2RYF7 251 aa9.34□□□□□ -0.91
COL6A3-212ENST00000491769 TTC28Q96AY4 2481 aa9.34□□□□□ -0.91
COL6A3-212ENST00000491769 Q6ZRU5 148 aa9.34□□□□□ -0.91
COL6A3-212ENST00000491769 A0A087WYN8 130 aa9.33□□□□□ -0.92
COL6A3-212ENST00000491769 F8WDY8 70 aa9.33□□□□□ -0.92
COL6A3-212ENST00000491769 H0Y9P7 68 aa9.33□□□□□ -0.92
COL6A3-212ENST00000491769 LINC00575Q6W349 94 aa9.33□□□□□ -0.92
COL6A3-212ENST00000491769 C7orf65Q6ZTY9 151 aa9.33□□□□□ -0.92
COL6A3-212ENST00000491769 CACNA1AO00555 2505 aa9.33□□□□□ -0.92
COL6A3-212ENST00000491769 PCDH15Q96QU1 1955 aa9.32□□□□□ -0.92
COL6A3-212ENST00000491769 SMCR5Q8TEV8 140 aa9.32□□□□□ -0.92
COL6A3-212ENST00000491769 RAI1Q7Z5J4 1906 aaPredicted RBP9.32□□□□□ -0.92
COL6A3-212ENST00000491769 BEAN1Q3B7T3 259 aa9.31□□□□□ -0.92
COL6A3-212ENST00000491769 CCDC168Q8NDH2 2452 aa9.31□□□□□ -0.92
COL6A3-212ENST00000491769 C22orf24Q9Y442 160 aa9.31□□□□□ -0.92
COL6A3-212ENST00000491769 A0A1W2PPR1 153 aa9.3□□□□□ -0.92
COL6A3-212ENST00000491769 DOPEY1Q5JWR5 2465 aa9.3□□□□□ -0.92
COL6A3-212ENST00000491769 IGIPA6NJ69 53 aa9.3□□□□□ -0.92
COL6A3-212ENST00000491769 hDV103S1A0JD37 113 aa9.29□□□□□ -0.92
COL6A3-212ENST00000491769 Q8N2B8 174 aa9.29□□□□□ -0.92
COL6A3-212ENST00000491769 MOBPQ13875 183 aa9.28□□□□□ -0.92
COL6A3-212ENST00000491769 Q6ZSN1 163 aa9.28□□□□□ -0.92
COL6A3-212ENST00000491769 ABCA2Q9BZC7 2435 aa9.28□□□□□ -0.92
COL6A3-212ENST00000491769 SOSTDC1Q6X4U4 206 aa9.27□□□□□ -0.92
COL6A3-212ENST00000491769 A8MTW9 85 aa9.27□□□□□ -0.93
COL6A3-212ENST00000491769 PCNX3Q9H6A9 2034 aa9.27□□□□□ -0.93
COL6A3-212ENST00000491769 NAV3Q8IVL0 2385 aa9.27□□□□□ -0.93
COL6A3-212ENST00000491769 ARHGAP32A7KAX9 2087 aa9.27□□□□□ -0.93
COL6A3-212ENST00000491769 COX7CP15954 63 aa9.26□□□□□ -0.93
COL6A3-212ENST00000491769 IMUPQ9GZP8 106 aa9.26□□□□□ -0.93
COL6A3-212ENST00000491769 CRYGAP11844 174 aa9.25□□□□□ -0.93
COL6A3-212ENST00000491769 NAV2Q8IVL1 2488 aa9.25□□□□□ -0.93
COL6A3-212ENST00000491769 A0A1B0GUV1 79 aa9.25□□□□□ -0.93
COL6A3-212ENST00000491769 TRBV7-7A0A0K0K1E9 115 aa9.24□□□□□ -0.93
COL6A3-212ENST00000491769 TRAV7A0A075B6U4 112 aa9.24□□□□□ -0.93
COL6A3-212ENST00000491769 TYMSOSQ8TAI1 123 aa9.24□□□□□ -0.93
COL6A3-212ENST00000491769 RTL8CO15255 209 aa9.24□□□□□ -0.93
COL6A3-212ENST00000491769 PLXNB1O43157 2135 aa9.24□□□□□ -0.93
COL6A3-212ENST00000491769 A0A087WVE0 104 aa9.23□□□□□ -0.93
COL6A3-212ENST00000491769 CHTF8P0CG12 524 aa9.22□□□□□ -0.93
COL6A3-212ENST00000491769 COX6B2Q6YFQ2 88 aa9.22□□□□□ -0.93
COL6A3-212ENST00000491769 KRTAP24-1Q3LI83 254 aa9.22□□□□□ -0.93
COL6A3-212ENST00000491769 C2orf91Q6ZV80 131 aa9.22□□□□□ -0.93
COL6A3-212ENST00000491769 MYO18BQ8IUG5 2567 aa9.21□□□□□ -0.93
COL6A3-212ENST00000491769 ZNF580Q9UK33 172 aa9.21□□□□□ -0.93
COL6A3-212ENST00000491769 Q8N3U1 123 aa9.21□□□□□ -0.93
COL6A3-212ENST00000491769 CCDC179H3BU77 68 aa9.21□□□□□ -0.94
COL6A3-212ENST00000491769 CSDC2Q9Y534 153 aaKnown RBP9.21□□□□□ -0.94
COL6A3-212ENST00000491769 MUC4Q99102 2169 aa9.21□□□□□ -0.94
COL6A3-212ENST00000491769 CNFNQ9BYD5 112 aa9.21□□□□□ -0.94
COL6A3-212ENST00000491769 ADAMTSL4-AS1Q5T5F5 129 aa9.2□□□□□ -0.94
COL6A3-212ENST00000491769 PSPHP1O15172 72 aa9.2□□□□□ -0.94
COL6A3-212ENST00000491769 TSPEAR-AS2P59090 65 aa9.2□□□□□ -0.94
COL6A3-212ENST00000491769 WWC2-AS2Q96NR7 200 aa9.2□□□□□ -0.94
COL6A3-212ENST00000491769 LINC00315P59091 139 aa9.2□□□□□ -0.94
COL6A3-212ENST00000491769 ATG2AQ2TAZ0 1938 aa9.19□□□□□ -0.94
COL6A3-212ENST00000491769 PMAIP1Q13794 54 aa9.19□□□□□ -0.94
COL6A3-212ENST00000491769 COL5A1P20908 1838 aaPredicted RBP9.19□□□□□ -0.94
COL6A3-212ENST00000491769 PHF5AQ7RTV0 110 aaKnown RBP9.18□□□□□ -0.94
COL6A3-212ENST00000491769 HCFC1P51610 2035 aa9.18□□□□□ -0.94
COL6A3-212ENST00000491769 C1orf64Q8NEQ6 169 aa9.18□□□□□ -0.94
COL6A3-212ENST00000491769 AMELXQ99217 191 aa9.17□□□□□ -0.94
COL6A3-212ENST00000491769 KIAA0087Q14695 138 aa9.17□□□□□ -0.94
COL6A3-212ENST00000491769 Q9UF83 564 aa9.17□□□□□ -0.94
COL6A3-212ENST00000491769 SMIM26A0A096LP01 95 aa9.16□□□□□ -0.94
COL6A3-212ENST00000491769 C1orf195Q5TG92 126 aa9.16□□□□□ -0.94
COL6A3-212ENST00000491769 LINC00167Q96N53 147 aa9.16□□□□□ -0.94
COL6A3-212ENST00000491769 Q6ZRP5 223 aa9.16□□□□□ -0.94
COL6A3-212ENST00000491769 ATP11AUNQ6ZP68 121 aa9.16□□□□□ -0.94
COL6A3-212ENST00000491769 NBDYA0A0U1RRE5 68 aa9.16□□□□□ -0.94
COL6A3-212ENST00000491769 LINC01561Q8N1V8 128 aa9.15□□□□□ -0.95
COL6A3-212ENST00000491769 RPL37AP61513 92 aaKnown RBP9.14□□□□□ -0.95
COL6A3-212ENST00000491769 TET2Q6N021 2002 aaPredicted RBP9.14□□□□□ -0.95
COL6A3-212ENST00000491769 KIF25-AS1Q9Y6Z4 181 aa9.14□□□□□ -0.95
COL6A3-212ENST00000491769 AGRNO00468 2067 aa9.13□□□□□ -0.95
COL6A3-212ENST00000491769 Q96NJ1 140 aa9.12□□□□□ -0.95
COL6A3-212ENST00000491769 A0A1B0GU69 56 aa9.12□□□□□ -0.95
COL6A3-212ENST00000491769 LINC00313P59037 77 aa9.12□□□□□ -0.95
COL6A3-212ENST00000491769 NCOR2Q9Y618 2525 aa9.1□□□□□ -0.95
COL6A3-212ENST00000491769 SMIM29Q86T20 159 aa9.09□□□□□ -0.95
COL6A3-212ENST00000491769 Q8NBF4 154 aa9.09□□□□□ -0.95
COL6A3-212ENST00000491769 C6orf48Q9UBA6 75 aa9.08□□□□□ -0.96
COL6A3-212ENST00000491769 ACYP2P14621 99 aa9.08□□□□□ -0.96
COL6A3-212ENST00000491769 PTPRSQ13332 1948 aa9.07□□□□□ -0.96
COL6A3-212ENST00000491769 LRP4O75096 1905 aa9.07□□□□□ -0.96
COL6A3-212ENST00000491769 ADAMTS20P59510 1910 aa9.07□□□□□ -0.96
COL6A3-212ENST00000491769 EPM2AB3EWF7 344 aa9.07□□□□□ -0.96
COL6A3-212ENST00000491769 TMEM254Q8TBM7 123 aa9.06□□□□□ -0.96
COL6A3-212ENST00000491769 C11orf72Q8NBR9 251 aa9.06□□□□□ -0.96
COL6A3-212ENST00000491769 LINC00588Q9Y4M8 146 aa9.05□□□□□ -0.96
COL6A3-212ENST00000491769 IGLV8-61A0A075B6I0 122 aa9.05□□□□□ -0.96
COL6A3-212ENST00000491769 YPEL4Q96NS1 127 aa9.04□□□□□ -0.96
COL6A3-212ENST00000491769 TP53AIP1Q9HCN2 124 aa9.04□□□□□ -0.96
COL6A3-212ENST00000491769 IGF2RP11717 2491 aa9.04□□□□□ -0.96
COL6A3-212ENST00000491769 EML5Q05BV3 1969 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms