RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 IGHV3OR16-9A0A0B4J2B5 98 aa8.25□□□□□ -1.09
SRGAP3-210ENST00000491467 LINC00959A0A1B0GUT2 108 aa8.25□□□□□ -1.09
SRGAP3-210ENST00000491467 TMEM262E9PQX1 116 aa8.25□□□□□ -1.09
SRGAP3-210ENST00000491467 TSPAN13O95857 204 aa8.25□□□□□ -1.09
SRGAP3-210ENST00000491467 PRSS2P07478 247 aa8.25□□□□□ -1.09
SRGAP3-210ENST00000491467 ZNF625Q96I27 306 aaPredicted RBP8.25□□□□□ -1.09
SRGAP3-210ENST00000491467 C11orf68Q9H3H3 251 aaKnown RBP8.25□□□□□ -1.09
SRGAP3-210ENST00000491467 Q9H8V8 135 aa8.25□□□□□ -1.09
SRGAP3-210ENST00000491467 RBX1P62877 108 aa8.24□□□□□ -1.09
SRGAP3-210ENST00000491467 COX7B2Q8TF08 81 aa8.24□□□□□ -1.09
SRGAP3-210ENST00000491467 ERG28Q9UKR5 140 aa8.24□□□□□ -1.09
SRGAP3-210ENST00000491467 IGHV3-33P01772 117 aa8.23□□□□□ -1.09
SRGAP3-210ENST00000491467 ADAMTSL4-AS1Q5T5F5 129 aa8.23□□□□□ -1.09
SRGAP3-210ENST00000491467 LELP1Q5T871 98 aa8.23□□□□□ -1.09
SRGAP3-210ENST00000491467 CELA1Q9UNI1 258 aa8.23□□□□□ -1.09
SRGAP3-210ENST00000491467 PKHD1P08F94 4074 aa8.22□□□□□ -1.09
SRGAP3-210ENST00000491467 DEFB4AO15263 64 aa8.22□□□□□ -1.09
SRGAP3-210ENST00000491467 TRBV30A0A0K0K1B3 111 aa8.21□□□□□ -1.1
SRGAP3-210ENST00000491467 K7ERU9 68 aa8.21□□□□□ -1.1
SRGAP3-210ENST00000491467 LOC107984156A0A0G2JMH3 177 aa8.2□□□□□ -1.1
SRGAP3-210ENST00000491467 MEIG1Q5JSS6 88 aa8.2□□□□□ -1.1
SRGAP3-210ENST00000491467 ARL17AQ8IVW1 177 aa8.2□□□□□ -1.1
SRGAP3-210ENST00000491467 LINC00308Q8TCZ7 52 aa8.2□□□□□ -1.1
SRGAP3-210ENST00000491467 IBA57-AS1B1ANH7 110 aa8.19□□□□□ -1.1
SRGAP3-210ENST00000491467 COX6CP09669 75 aa8.19□□□□□ -1.1
SRGAP3-210ENST00000491467 SCGB1C2P0DMR2 95 aa8.19□□□□□ -1.1
SRGAP3-210ENST00000491467 OCIAD2Q56VL3 154 aa8.19□□□□□ -1.1
SRGAP3-210ENST00000491467 CD164L2Q6UWJ8 174 aa8.19□□□□□ -1.1
SRGAP3-210ENST00000491467 DMBT1Q9UGM3 2413 aaPredicted RBP8.18□□□□□ -1.1
SRGAP3-210ENST00000491467 A0A096LPF7 62 aa8.18□□□□□ -1.1
SRGAP3-210ENST00000491467 CXCL5P42830 114 aa8.18□□□□□ -1.1
SRGAP3-210ENST00000491467 PSMB2P49721 201 aa8.18□□□□□ -1.1
SRGAP3-210ENST00000491467 Q8IZM0 81 aa8.18□□□□□ -1.1
SRGAP3-210ENST00000491467 IGKV3OR2-268A0A0C4DH90 116 aa8.17□□□□□ -1.1
SRGAP3-210ENST00000491467 H3BMG7 143 aa8.17□□□□□ -1.1
SRGAP3-210ENST00000491467 M0QXV9 152 aa8.17□□□□□ -1.1
SRGAP3-210ENST00000491467 DYNC1H1Q14204 4646 aaKnown RBP8.17□□□□□ -1.1
SRGAP3-210ENST00000491467 EIF4EBP3O60516 100 aaPredicted RBP8.16□□□□□ -1.1
SRGAP3-210ENST00000491467 ANGP03950 147 aaKnown RBP8.16□□□□□ -1.1
SRGAP3-210ENST00000491467 HTN3P15516 51 aa8.16□□□□□ -1.1
SRGAP3-210ENST00000491467 REG3AQ06141 175 aa8.16□□□□□ -1.1
SRGAP3-210ENST00000491467 Q1RN00 199 aa8.16□□□□□ -1.1
SRGAP3-210ENST00000491467 C6orf226Q5I0X4 101 aa8.16□□□□□ -1.1
SRGAP3-210ENST00000491467 LYPD5Q6UWN5 251 aa8.16□□□□□ -1.1
SRGAP3-210ENST00000491467 C5orf38Q86SI9 138 aa8.16□□□□□ -1.1
SRGAP3-210ENST00000491467 TM2D3Q9BRN9 247 aa8.16□□□□□ -1.1
SRGAP3-210ENST00000491467 TRAV8-4A0A0B4J246 113 aa8.15□□□□□ -1.1
SRGAP3-210ENST00000491467 J3QR89 54 aa8.15□□□□□ -1.1
SRGAP3-210ENST00000491467 COX7A2LO14548 114 aa8.15□□□□□ -1.1
SRGAP3-210ENST00000491467 LINC00269Q8N2A0 174 aa8.15□□□□□ -1.1
SRGAP3-210ENST00000491467 TOMM7Q9P0U1 55 aa8.15□□□□□ -1.1
SRGAP3-210ENST00000491467 PRO0461Q9UI25 63 aa8.15□□□□□ -1.1
SRGAP3-210ENST00000491467 HSPG2P98160 4391 aa8.14□□□□□ -1.11
SRGAP3-210ENST00000491467 XCL1P47992 114 aa8.14□□□□□ -1.11
SRGAP3-210ENST00000491467 COX17Q14061 63 aa8.14□□□□□ -1.11
SRGAP3-210ENST00000491467 ATXN8Q156A1 80 aa8.14□□□□□ -1.11
SRGAP3-210ENST00000491467 LINC01600Q96MT4 127 aa8.14□□□□□ -1.11
SRGAP3-210ENST00000491467 PRR34Q9NV39 138 aa8.14□□□□□ -1.11
SRGAP3-210ENST00000491467 CBY1Q9Y3M2 126 aa8.14□□□□□ -1.11
SRGAP3-210ENST00000491467 TRAV13-2A0A0B4J235 113 aa8.13□□□□□ -1.11
SRGAP3-210ENST00000491467 TCL1BO95988 128 aa8.13□□□□□ -1.11
SRGAP3-210ENST00000491467 CHCHD10Q8WYQ3 142 aaPredicted RBP8.13□□□□□ -1.11
SRGAP3-210ENST00000491467 SPATA25Q9BR10 227 aa8.13□□□□□ -1.11
SRGAP3-210ENST00000491467 KLK5Q9Y337 293 aaPredicted RBP8.13□□□□□ -1.11
SRGAP3-210ENST00000491467 LINC00158P58513 81 aa8.12□□□□□ -1.11
SRGAP3-210ENST00000491467 WFDC2Q14508 124 aa8.12□□□□□ -1.11
SRGAP3-210ENST00000491467 C11orf45Q8TAV5 145 aa8.12□□□□□ -1.11
SRGAP3-210ENST00000491467 MALP21145 153 aa8.11□□□□□ -1.11
SRGAP3-210ENST00000491467 RPL13AP40429 203 aaKnown RBP8.11□□□□□ -1.11
SRGAP3-210ENST00000491467 CKS1BP61024 79 aa8.11□□□□□ -1.11
SRGAP3-210ENST00000491467 NPC2P61916 151 aa8.11□□□□□ -1.11
SRGAP3-210ENST00000491467 CFAP161Q6P656 301 aa8.11□□□□□ -1.11
SRGAP3-210ENST00000491467 DAND5Q8N907 189 aa8.11□□□□□ -1.11
SRGAP3-210ENST00000491467 RETNQ9HD89 108 aa8.11□□□□□ -1.11
SRGAP3-210ENST00000491467 H7C2G1 150 aa8.1□□□□□ -1.11
SRGAP3-210ENST00000491467 TRIAP1O43715 76 aa8.1□□□□□ -1.11
SRGAP3-210ENST00000491467 SOSTDC1Q6X4U4 206 aa8.1□□□□□ -1.11
SRGAP3-210ENST00000491467 MIR7-3HGQ8N6C7 128 aa8.1□□□□□ -1.11
SRGAP3-210ENST00000491467 DEFB131BA0A096LNP1 70 aa8.09□□□□□ -1.11
SRGAP3-210ENST00000491467 A0A0J9YWU9 116 aa8.09□□□□□ -1.11
SRGAP3-210ENST00000491467 A0A1B0GVY2 172 aa8.09□□□□□ -1.11
SRGAP3-210ENST00000491467 FOXI1Q12951 378 aa8.09□□□□□ -1.11
SRGAP3-210ENST00000491467 KIAA0087Q14695 138 aa8.09□□□□□ -1.11
SRGAP3-210ENST00000491467 Q6ZTC4 211 aa8.09□□□□□ -1.11
SRGAP3-210ENST00000491467 C15orf53Q8NAA6 179 aa8.09□□□□□ -1.11
SRGAP3-210ENST00000491467 TRAV10A0A0B4J240 114 aa8.08□□□□□ -1.12
SRGAP3-210ENST00000491467 A0A0U1RRA0 63 aa8.08□□□□□ -1.12
SRGAP3-210ENST00000491467 CRPP02741 224 aa8.08□□□□□ -1.12
SRGAP3-210ENST00000491467 LINC01620Q4KN68 170 aa8.08□□□□□ -1.12
SRGAP3-210ENST00000491467 CLPSL2Q6UWE3 100 aa8.08□□□□□ -1.12
SRGAP3-210ENST00000491467 SND1-IT1Q9HBX3 110 aa8.08□□□□□ -1.12
SRGAP3-210ENST00000491467 KLK12Q9UKR0 248 aa8.08□□□□□ -1.12
SRGAP3-210ENST00000491467 VPS13DQ5THJ4 4388 aa8.08□□□□□ -1.12
SRGAP3-210ENST00000491467 DNAH11Q96DT5 4516 aa8.08□□□□□ -1.12
SRGAP3-210ENST00000491467 F8WDY8 70 aa8.07□□□□□ -1.12
SRGAP3-210ENST00000491467 ETDBQ3ZM63 59 aa8.07□□□□□ -1.12
SRGAP3-210ENST00000491467 TRBV10-2A0A0K0K1G8 114 aa8.06□□□□□ -1.12
SRGAP3-210ENST00000491467 GAGE12HA6NDE8 117 aa8.06□□□□□ -1.12
SRGAP3-210ENST00000491467 SLC25A20O43772 301 aa8.06□□□□□ -1.12
SRGAP3-210ENST00000491467 NDUFC2O95298 119 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms