RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 XAGE1AQ9HD64 81 aa8.9□□□□□ -0.98
SCAMP3-208ENST00000490999 CRCT1Q9UGL9 99 aa8.9□□□□□ -0.98
SCAMP3-208ENST00000490999 PYGO1Q9Y3Y4 419 aa8.9□□□□□ -0.98
SCAMP3-208ENST00000490999 Q8N8P6 123 aa8.89□□□□□ -0.99
SCAMP3-208ENST00000490999 IGLV7-46A0A075B6I9 117 aa8.88□□□□□ -0.99
SCAMP3-208ENST00000490999 IFI27P40305 119 aaPredicted RBP8.88□□□□□ -0.99
SCAMP3-208ENST00000490999 RPL28P46779 137 aaKnown RBP8.88□□□□□ -0.99
SCAMP3-208ENST00000490999 LOC389332A0A1B0GUA5 103 aa8.87□□□□□ -0.99
SCAMP3-208ENST00000490999 BCE1O60756 84 aa8.87□□□□□ -0.99
SCAMP3-208ENST00000490999 S100PP25815 95 aa8.87□□□□□ -0.99
SCAMP3-208ENST00000490999 G0S2P27469 103 aa8.87□□□□□ -0.99
SCAMP3-208ENST00000490999 ORMDL2Q53FV1 153 aa8.87□□□□□ -0.99
SCAMP3-208ENST00000490999 LCE2DQ5TA82 110 aaPredicted RBP8.87□□□□□ -0.99
SCAMP3-208ENST00000490999 LINC00173Q6ZV60 143 aa8.87□□□□□ -0.99
SCAMP3-208ENST00000490999 COMMD7Q86VX2 200 aa8.87□□□□□ -0.99
SCAMP3-208ENST00000490999 LINC00304Q8N9R0 145 aa8.87□□□□□ -0.99
SCAMP3-208ENST00000490999 NXT2Q9NPJ8 142 aaKnown RBP8.87□□□□□ -0.99
SCAMP3-208ENST00000490999 NPSP0C0P6 89 aa8.86□□□□□ -0.99
SCAMP3-208ENST00000490999 COX19Q49B96 90 aa8.86□□□□□ -0.99
SCAMP3-208ENST00000490999 C10orf91Q5T1B1 145 aa8.86□□□□□ -0.99
SCAMP3-208ENST00000490999 TMEM141Q96I45 108 aa8.85□□□□□ -0.99
SCAMP3-208ENST00000490999 GNB1LQ9BYB4 327 aa8.85□□□□□ -0.99
SCAMP3-208ENST00000490999 CYSLTR1Q9Y271 337 aa8.85□□□□□ -0.99
SCAMP3-208ENST00000490999 LBHQ53QV2 105 aaPredicted RBP8.84□□□□□ -0.99
SCAMP3-208ENST00000490999 MRPL55Q7Z7F7 128 aaKnown RBP8.84□□□□□ -0.99
SCAMP3-208ENST00000490999 TOMM7Q9P0U1 55 aa8.84□□□□□ -0.99
SCAMP3-208ENST00000490999 IGLV4-3A0A075B6K6 122 aa8.83□□□□□ -1
SCAMP3-208ENST00000490999 RPL37AP8A6NKH3 93 aa8.83□□□□□ -1
SCAMP3-208ENST00000490999 RHEBQ15382 184 aa8.83□□□□□ -1
SCAMP3-208ENST00000490999 C2orf66Q6UXQ4 117 aa8.83□□□□□ -1
SCAMP3-208ENST00000490999 GAGE10A6NGK3 116 aa8.82□□□□□ -1
SCAMP3-208ENST00000490999 ZC2HC1BQ5TFG8 222 aa8.82□□□□□ -1
SCAMP3-208ENST00000490999 Q6ZN92 141 aa8.82□□□□□ -1
SCAMP3-208ENST00000490999 TEX43Q6ZNM6 134 aa8.82□□□□□ -1
SCAMP3-208ENST00000490999 LINC01549A6NIU2 74 aa8.81□□□□□ -1
SCAMP3-208ENST00000490999 PAPPA-AS1Q5QFB9 102 aa8.81□□□□□ -1
SCAMP3-208ENST00000490999 C2orf88Q9BSF0 95 aa8.81□□□□□ -1
SCAMP3-208ENST00000490999 PPDPFQ9H3Y8 114 aa8.81□□□□□ -1
SCAMP3-208ENST00000490999 PRSS2P07478 247 aa8.8□□□□□ -1
SCAMP3-208ENST00000490999 LINC01547P58512 204 aaPredicted RBP8.8□□□□□ -1
SCAMP3-208ENST00000490999 CKS1BP61024 79 aa8.8□□□□□ -1
SCAMP3-208ENST00000490999 LINC01561Q8N1V8 128 aa8.8□□□□□ -1
SCAMP3-208ENST00000490999 AMELXQ99217 191 aa8.8□□□□□ -1
SCAMP3-208ENST00000490999 VCX2Q9H322 139 aa8.8□□□□□ -1
SCAMP3-208ENST00000490999 IGIPA6NJ69 53 aa8.79□□□□□ -1
SCAMP3-208ENST00000490999 KIAA1644Q3SXP7 199 aa8.79□□□□□ -1
SCAMP3-208ENST00000490999 RPS10P5Q9NQ39 176 aa8.79□□□□□ -1
SCAMP3-208ENST00000490999 UBE2AP49459 152 aa8.78□□□□□ -1
SCAMP3-208ENST00000490999 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
SCAMP3-208ENST00000490999 KRTAP13-1Q8IUC0 172 aa8.78□□□□□ -1
SCAMP3-208ENST00000490999 TOMM6Q96B49 74 aa8.78□□□□□ -1
SCAMP3-208ENST00000490999 LINC00167Q96N53 147 aa8.78□□□□□ -1
SCAMP3-208ENST00000490999 TIMM17AQ99595 171 aa8.78□□□□□ -1
SCAMP3-208ENST00000490999 KRTAP4-1Q9BYQ7 146 aa8.78□□□□□ -1
SCAMP3-208ENST00000490999 TP73-AS1Q9UF72 201 aa8.78□□□□□ -1
SCAMP3-208ENST00000490999 IGKV2D-26A0A0A0MRZ7 120 aa8.77□□□□□ -1.01
SCAMP3-208ENST00000490999 SEC11AP67812 179 aa8.77□□□□□ -1.01
SCAMP3-208ENST00000490999 FAM229BQ4G0N7 80 aa8.77□□□□□ -1.01
SCAMP3-208ENST00000490999 ALKBH7Q9BT30 221 aaPredicted RBP8.77□□□□□ -1.01
SCAMP3-208ENST00000490999 LINC01546A6NGU7 62 aa8.76□□□□□ -1.01
SCAMP3-208ENST00000490999 FABP9Q0Z7S8 132 aa8.76□□□□□ -1.01
SCAMP3-208ENST00000490999 NDUFA5Q16718 116 aa8.76□□□□□ -1.01
SCAMP3-208ENST00000490999 C6orf226Q5I0X4 101 aa8.76□□□□□ -1.01
SCAMP3-208ENST00000490999 ERASQ7Z444 233 aa8.76□□□□□ -1.01
SCAMP3-208ENST00000490999 PRLHP81277 87 aa8.75□□□□□ -1.01
SCAMP3-208ENST00000490999 Q8IZM0 81 aa8.75□□□□□ -1.01
SCAMP3-208ENST00000490999 MRPL18Q9H0U6 180 aaKnown RBP8.75□□□□□ -1.01
SCAMP3-208ENST00000490999 SCO1O75880 301 aa8.74□□□□□ -1.01
SCAMP3-208ENST00000490999 SNAPINO95295 136 aa8.74□□□□□ -1.01
SCAMP3-208ENST00000490999 HERVK_113P63121 156 aa8.74□□□□□ -1.01
SCAMP3-208ENST00000490999 SVBPQ8N300 66 aa8.74□□□□□ -1.01
SCAMP3-208ENST00000490999 C3orf22Q8N5N4 141 aa8.74□□□□□ -1.01
SCAMP3-208ENST00000490999 F8VRH5 84 aa8.73□□□□□ -1.01
SCAMP3-208ENST00000490999 APOC3P02656 99 aa8.73□□□□□ -1.01
SCAMP3-208ENST00000490999 SCGB3A1Q96QR1 104 aa8.73□□□□□ -1.01
SCAMP3-208ENST00000490999 IGKV2-28A0A075B6P5 120 aa8.72□□□□□ -1.01
SCAMP3-208ENST00000490999 IGKV2D-28P01615 120 aa8.72□□□□□ -1.01
SCAMP3-208ENST00000490999 FA2HQ7L5A8 372 aa8.72□□□□□ -1.01
SCAMP3-208ENST00000490999 SMCO4Q9NRQ5 59 aa8.72□□□□□ -1.01
SCAMP3-208ENST00000490999 ASB16-AS1Q495Z4 193 aa8.71□□□□□ -1.02
SCAMP3-208ENST00000490999 KRTAP13-3Q3SY46 172 aa8.7□□□□□ -1.02
SCAMP3-208ENST00000490999 GEMIN7Q9H840 131 aaKnown RBP8.7□□□□□ -1.02
SCAMP3-208ENST00000490999 CDKN2A-AS1Q9UH64 79 aa8.7□□□□□ -1.02
SCAMP3-208ENST00000490999 TRAPPC1Q9Y5R8 145 aa8.7□□□□□ -1.02
SCAMP3-208ENST00000490999 LINC00337Q8N6G1 96 aa8.69□□□□□ -1.02
SCAMP3-208ENST00000490999 NKAPP1Q8N9T2 125 aa8.69□□□□□ -1.02
SCAMP3-208ENST00000490999 TINCRA0A1B0GVN0 87 aa8.68□□□□□ -1.02
SCAMP3-208ENST00000490999 TMEM238C9JI98 176 aa8.67□□□□□ -1.02
SCAMP3-208ENST00000490999 RAB5BP61020 215 aa8.67□□□□□ -1.02
SCAMP3-208ENST00000490999 CST9LQ9H4G1 147 aa8.67□□□□□ -1.02
SCAMP3-208ENST00000490999 IGLV5-37A0A075B6J1 123 aa8.66□□□□□ -1.02
SCAMP3-208ENST00000490999 LINC00614P0C842 121 aa8.66□□□□□ -1.02
SCAMP3-208ENST00000490999 PMVKQ15126 192 aa8.66□□□□□ -1.02
SCAMP3-208ENST00000490999 FAM19A1Q7Z5A9 133 aa8.66□□□□□ -1.02
SCAMP3-208ENST00000490999 C18orf32Q8TCD1 76 aa8.66□□□□□ -1.02
SCAMP3-208ENST00000490999 IGLV5-45A0A087WSX0 123 aa8.65□□□□□ -1.02
SCAMP3-208ENST00000490999 CXCL5P42830 114 aa8.65□□□□□ -1.02
SCAMP3-208ENST00000490999 PDZD11Q5EBL8 140 aa8.65□□□□□ -1.02
SCAMP3-208ENST00000490999 FP248Q71RG6 208 aaPredicted RBP8.65□□□□□ -1.02
SCAMP3-208ENST00000490999 SMIM1B2RUZ4 78 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms