RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 F8VRH5 84 aa7.11□□□□□ -1.27
HDAC9-225ENST00000490851 SRSF9Q13242 221 aaKnown RBP eCLIP7.11□□□□□ -1.27
HDAC9-225ENST00000490851 FHL2Q14192 279 aa7.11□□□□□ -1.27
HDAC9-225ENST00000490851 TMEM170BQ5T4T1 132 aa7.11□□□□□ -1.27
HDAC9-225ENST00000490851 FP248Q71RG6 208 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-225ENST00000490851 C5orf38Q86SI9 138 aa7.11□□□□□ -1.27
HDAC9-225ENST00000490851 CHCHD7Q9BUK0 85 aa7.11□□□□□ -1.27
HDAC9-225ENST00000490851 RBM12B-AS1Q9P1G2 102 aa7.11□□□□□ -1.27
HDAC9-225ENST00000490851 SLC25A20O43772 301 aa7.11□□□□□ -1.27
HDAC9-225ENST00000490851 EGFEM1PQ0D2K5 195 aa7.11□□□□□ -1.27
HDAC9-225ENST00000490851 SERP2Q8N6R1 65 aa7.11□□□□□ -1.27
HDAC9-225ENST00000490851 TMEM141Q96I45 108 aa7.11□□□□□ -1.27
HDAC9-225ENST00000490851 TIMM17AQ99595 171 aa7.11□□□□□ -1.27
HDAC9-225ENST00000490851 CYSTM1Q9H1C7 97 aa7.11□□□□□ -1.27
HDAC9-225ENST00000490851 CELA1Q9UNI1 258 aa7.11□□□□□ -1.27
HDAC9-225ENST00000490851 IGKV2D-26A0A0A0MRZ7 120 aa7.1□□□□□ -1.27
HDAC9-225ENST00000490851 TRBV10-1A0A0K0K1A3 114 aa7.1□□□□□ -1.27
HDAC9-225ENST00000490851 PLNP26678 52 aa7.1□□□□□ -1.27
HDAC9-225ENST00000490851 Q8NAQ8 132 aa7.1□□□□□ -1.27
HDAC9-225ENST00000490851 TTTY13Q9BZ97 58 aa7.1□□□□□ -1.27
HDAC9-225ENST00000490851 TRBV6-4A0A1B0GX49 114 aa7.1□□□□□ -1.27
HDAC9-225ENST00000490851 HERVK_113P61574 105 aa7.1□□□□□ -1.27
HDAC9-225ENST00000490851 DEFB121Q5J5C9 76 aa7.1□□□□□ -1.27
HDAC9-225ENST00000490851 IGLV4-3A0A075B6K6 122 aa7.09□□□□□ -1.27
HDAC9-225ENST00000490851 TRBV25-1A0A075B6N4 114 aa7.09□□□□□ -1.27
HDAC9-225ENST00000490851 HTN3P15516 51 aa7.09□□□□□ -1.27
HDAC9-225ENST00000490851 DAD1P61803 113 aa7.09□□□□□ -1.27
HDAC9-225ENST00000490851 LINC00643Q86TS7 51 aa7.09□□□□□ -1.27
HDAC9-225ENST00000490851 MDFIQ99750 246 aa7.09□□□□□ -1.27
HDAC9-225ENST00000490851 A0A096LPF7 62 aa7.09□□□□□ -1.27
HDAC9-225ENST00000490851 LINC01549A6NIU2 74 aa7.09□□□□□ -1.27
HDAC9-225ENST00000490851 NTM-AS1Q6ZSK4 140 aa7.09□□□□□ -1.27
HDAC9-225ENST00000490851 A0A0J9YY99 117 aa7.08□□□□□ -1.28
HDAC9-225ENST00000490851 C11orf86A6NJI1 115 aa7.08□□□□□ -1.28
HDAC9-225ENST00000490851 LYRM9A8MSI8 78 aa7.08□□□□□ -1.28
HDAC9-225ENST00000490851 MIFP14174 115 aa7.08□□□□□ -1.28
HDAC9-225ENST00000490851 LINC00612Q8N6U2 182 aa7.08□□□□□ -1.28
HDAC9-225ENST00000490851 DNAH3Q8TD57 4116 aa7.08□□□□□ -1.28
HDAC9-225ENST00000490851 IGLV4-69A0A075B6H9 119 aa7.08□□□□□ -1.28
HDAC9-225ENST00000490851 GYPEP15421 78 aa7.08□□□□□ -1.28
HDAC9-225ENST00000490851 UBE2D4Q9Y2X8 147 aa7.08□□□□□ -1.28
HDAC9-225ENST00000490851 TM2D3Q9BRN9 247 aa7.07□□□□□ -1.28
HDAC9-225ENST00000490851 FAM104AQ969W3 186 aa7.07□□□□□ -1.28
HDAC9-225ENST00000490851 A0A0J9YXV3 536 aa7.06□□□□□ -1.28
HDAC9-225ENST00000490851 SPART-AS1P0CW21 52 aa7.06□□□□□ -1.28
HDAC9-225ENST00000490851 NTN5Q8WTR8 489 aaPredicted RBP7.06□□□□□ -1.28
HDAC9-225ENST00000490851 UBE2L6O14933 153 aa7.05□□□□□ -1.28
HDAC9-225ENST00000490851 UBE2WQ96B02 151 aa7.05□□□□□ -1.28
HDAC9-225ENST00000490851 PRO0255Q9UI72 69 aa7.05□□□□□ -1.28
HDAC9-225ENST00000490851 IGHV3-64A0A075B6Q5 118 aa7.05□□□□□ -1.28
HDAC9-225ENST00000490851 IGHV1-58A0A0C4DH39 117 aa7.05□□□□□ -1.28
HDAC9-225ENST00000490851 LOC107984156A0A0G2JMH3 177 aa7.05□□□□□ -1.28
HDAC9-225ENST00000490851 PAPPA-AS1Q5QFB9 102 aa7.05□□□□□ -1.28
HDAC9-225ENST00000490851 ARL17AQ8IVW1 177 aa7.05□□□□□ -1.28
HDAC9-225ENST00000490851 TMEM243Q9BU79 118 aa7.05□□□□□ -1.28
HDAC9-225ENST00000490851 SDIM1Q6ZPB5 146 aa7.04□□□□□ -1.28
HDAC9-225ENST00000490851 C8orf87E5RJ46 101 aa7.03□□□□□ -1.28
HDAC9-225ENST00000490851 UBE2D1P51668 147 aa7.03□□□□□ -1.28
HDAC9-225ENST00000490851 MAPKAPK5-AS1Q8N8E1 139 aa7.03□□□□□ -1.28
HDAC9-225ENST00000490851 AMELXQ99217 191 aa7.03□□□□□ -1.28
HDAC9-225ENST00000490851 IGKV3OR2-268A0A0C4DH90 116 aa7.02□□□□□ -1.28
HDAC9-225ENST00000490851 VSIG2Q96IQ7 327 aa7.02□□□□□ -1.28
HDAC9-225ENST00000490851 HIST1H4GQ99525 98 aa7.02□□□□□ -1.28
HDAC9-225ENST00000490851 TRBV6-8A0A0A6YYG3 113 aa7.02□□□□□ -1.29
HDAC9-225ENST00000490851 KTN1-AS1Q86SY8 53 aa7.02□□□□□ -1.29
HDAC9-225ENST00000490851 Q9H8V8 135 aa7.02□□□□□ -1.29
HDAC9-225ENST00000490851 ZNF22P17026 224 aaPredicted RBP7.01□□□□□ -1.29
HDAC9-225ENST00000490851 A0A0J9YWU9 116 aa7.01□□□□□ -1.29
HDAC9-225ENST00000490851 K7EIL1 84 aa7.01□□□□□ -1.29
HDAC9-225ENST00000490851 TRBV10-2A0A0K0K1G8 114 aa7□□□□□ -1.29
HDAC9-225ENST00000490851 ZNF815PA8K554 130 aa7□□□□□ -1.29
HDAC9-225ENST00000490851 TSPEAR-AS2P59090 65 aa7□□□□□ -1.29
HDAC9-225ENST00000490851 TIMM21Q9BVV7 248 aa7□□□□□ -1.29
HDAC9-225ENST00000490851 Q6ZTC4 211 aa6.99□□□□□ -1.29
HDAC9-225ENST00000490851 CDC42SE2Q9NRR3 84 aa6.99□□□□□ -1.29
HDAC9-225ENST00000490851 IGLV4-60A0A075B6I1 120 aa6.99□□□□□ -1.29
HDAC9-225ENST00000490851 TRAV8-3A0A0A6YYJ7 113 aa6.99□□□□□ -1.29
HDAC9-225ENST00000490851 TEX49A0A1B0GTD5 131 aa6.99□□□□□ -1.29
HDAC9-225ENST00000490851 TMEM223A0PJW6 202 aa6.99□□□□□ -1.29
HDAC9-225ENST00000490851 ATP5EP56381 51 aaPredicted RBP6.98□□□□□ -1.29
HDAC9-225ENST00000490851 NANOS2P60321 138 aaKnown RBP6.98□□□□□ -1.29
HDAC9-225ENST00000490851 COX6A2Q02221 97 aa6.98□□□□□ -1.29
HDAC9-225ENST00000490851 STAB2Q8WWQ8 2551 aa6.98□□□□□ -1.29
HDAC9-225ENST00000490851 SS18Q15532 418 aa6.98□□□□□ -1.29
HDAC9-225ENST00000490851 SCGB1D4Q6XE38 83 aa6.98□□□□□ -1.29
HDAC9-225ENST00000490851 CDKN2A-AS1Q9UH64 79 aa6.98□□□□□ -1.29
HDAC9-225ENST00000490851 LGALS3P17931 250 aaKnown RBP6.97□□□□□ -1.29
HDAC9-225ENST00000490851 CLPSL2Q6UWE3 100 aa6.97□□□□□ -1.29
HDAC9-225ENST00000490851 C11orf68Q9H3H3 251 aaKnown RBP6.97□□□□□ -1.29
HDAC9-225ENST00000490851 TIMM17BO60830 172 aa6.97□□□□□ -1.29
HDAC9-225ENST00000490851 LINC00242Q5T6M2 205 aa6.97□□□□□ -1.29
HDAC9-225ENST00000490851 C6orf223Q8N319 242 aa6.97□□□□□ -1.29
HDAC9-225ENST00000490851 Q8N3U1 123 aa6.97□□□□□ -1.29
HDAC9-225ENST00000490851 ICOSQ9Y6W8 199 aa6.97□□□□□ -1.29
HDAC9-225ENST00000490851 LEPROTO15243 131 aa6.96□□□□□ -1.3
HDAC9-225ENST00000490851 ATXN8Q156A1 80 aa6.96□□□□□ -1.3
HDAC9-225ENST00000490851 COL7A1Q02388 2944 aa6.95□□□□□ -1.3
HDAC9-225ENST00000490851 H7C423 109 aa6.95□□□□□ -1.3
HDAC9-225ENST00000490851 NDUFS5O43920 106 aa6.95□□□□□ -1.3
HDAC9-225ENST00000490851 IGHV3-30-3P0DP02 117 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms