RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 C15orf53Q8NAA6 179 aa9.23□□□□□ -0.93
RIPPLY3-203ENST00000490393 KIAA0087Q14695 138 aa9.22□□□□□ -0.93
RIPPLY3-203ENST00000490393 DAND5Q8N907 189 aa9.22□□□□□ -0.93
RIPPLY3-203ENST00000490393 ERG28Q9UKR5 140 aa9.22□□□□□ -0.93
RIPPLY3-203ENST00000490393 WFDC10BQ8IUB3 73 aa9.21□□□□□ -0.93
RIPPLY3-203ENST00000490393 KLK5Q9Y337 293 aaPredicted RBP9.21□□□□□ -0.93
RIPPLY3-203ENST00000490393 CXCL5P42830 114 aa9.21□□□□□ -0.94
RIPPLY3-203ENST00000490393 LYRM7Q5U5X0 104 aa9.21□□□□□ -0.94
RIPPLY3-203ENST00000490393 DNAH9Q9NYC9 4486 aa9.2□□□□□ -0.94
RIPPLY3-203ENST00000490393 IGLV10-54A0A075B6I4 117 aa9.2□□□□□ -0.94
RIPPLY3-203ENST00000490393 SOSTDC1Q6X4U4 206 aa9.2□□□□□ -0.94
RIPPLY3-203ENST00000490393 MGAM2Q2M2H8 2515 aa9.2□□□□□ -0.94
RIPPLY3-203ENST00000490393 GAGE12HA6NDE8 117 aa9.19□□□□□ -0.94
RIPPLY3-203ENST00000490393 MALP21145 153 aa9.19□□□□□ -0.94
RIPPLY3-203ENST00000490393 NPC2P61916 151 aa9.19□□□□□ -0.94
RIPPLY3-203ENST00000490393 LINC01556Q5JQF7 62 aa9.19□□□□□ -0.94
RIPPLY3-203ENST00000490393 A0A0U1RRA0 63 aa9.19□□□□□ -0.94
RIPPLY3-203ENST00000490393 CRPP02741 224 aa9.18□□□□□ -0.94
RIPPLY3-203ENST00000490393 MIR7-3HGQ8N6C7 128 aa9.18□□□□□ -0.94
RIPPLY3-203ENST00000490393 TRBV20-1A0A075B6N2 111 aa9.17□□□□□ -0.94
RIPPLY3-203ENST00000490393 LOC107984156A0A0G2JMH3 177 aa9.17□□□□□ -0.94
RIPPLY3-203ENST00000490393 TRBV30A0A0K0K1B3 111 aa9.17□□□□□ -0.94
RIPPLY3-203ENST00000490393 LINC00158P58513 81 aa9.17□□□□□ -0.94
RIPPLY3-203ENST00000490393 ARL17AQ8IVW1 177 aa9.17□□□□□ -0.94
RIPPLY3-203ENST00000490393 UBE2WQ96B02 151 aa9.17□□□□□ -0.94
RIPPLY3-203ENST00000490393 B9D2Q9BPU9 175 aa9.17□□□□□ -0.94
RIPPLY3-203ENST00000490393 CKS1BP61024 79 aa9.17□□□□□ -0.94
RIPPLY3-203ENST00000490393 COX17Q14061 63 aa9.17□□□□□ -0.94
RIPPLY3-203ENST00000490393 F8W1H4 67 aa9.16□□□□□ -0.94
RIPPLY3-203ENST00000490393 DNAH10OSP0CZ25 163 aa9.16□□□□□ -0.94
RIPPLY3-203ENST00000490393 CFAP161Q6P656 301 aa9.16□□□□□ -0.94
RIPPLY3-203ENST00000490393 KRTAP26-1Q6PEX3 210 aa9.16□□□□□ -0.94
RIPPLY3-203ENST00000490393 H3BMG7 143 aa9.15□□□□□ -0.94
RIPPLY3-203ENST00000490393 C2orf82Q6UX34 121 aa9.15□□□□□ -0.95
RIPPLY3-203ENST00000490393 SCGB1C2P0DMR2 95 aa9.14□□□□□ -0.95
RIPPLY3-203ENST00000490393 PFN2P35080 140 aa9.13□□□□□ -0.95
RIPPLY3-203ENST00000490393 PSMB2P49721 201 aa9.13□□□□□ -0.95
RIPPLY3-203ENST00000490393 MUC7Q8TAX7 377 aa9.13□□□□□ -0.95
RIPPLY3-203ENST00000490393 H7C2G1 150 aa9.13□□□□□ -0.95
RIPPLY3-203ENST00000490393 CCL18P55774 89 aa9.13□□□□□ -0.95
RIPPLY3-203ENST00000490393 Q1RN00 199 aa9.13□□□□□ -0.95
RIPPLY3-203ENST00000490393 PRO0461Q9UI25 63 aa9.13□□□□□ -0.95
RIPPLY3-203ENST00000490393 LINC00588Q9Y4M8 146 aa9.13□□□□□ -0.95
RIPPLY3-203ENST00000490393 TCL1BO95988 128 aa9.12□□□□□ -0.95
RIPPLY3-203ENST00000490393 RPL13AP40429 203 aaKnown RBP9.12□□□□□ -0.95
RIPPLY3-203ENST00000490393 SPAG11BQ08648 103 aa9.12□□□□□ -0.95
RIPPLY3-203ENST00000490393 SND1-IT1Q9HBX3 110 aa9.12□□□□□ -0.95
RIPPLY3-203ENST00000490393 TRAV13-2A0A0B4J235 113 aa9.11□□□□□ -0.95
RIPPLY3-203ENST00000490393 TRIAP1O43715 76 aa9.11□□□□□ -0.95
RIPPLY3-203ENST00000490393 GVQW2A0A096LPI5 108 aaPredicted RBP9.11□□□□□ -0.95
RIPPLY3-203ENST00000490393 COX6CP09669 75 aa9.11□□□□□ -0.95
RIPPLY3-203ENST00000490393 NHLRC4P0CG21 123 aaPredicted RBP9.11□□□□□ -0.95
RIPPLY3-203ENST00000490393 UPK3BQ9BT76 320 aa9.11□□□□□ -0.95
RIPPLY3-203ENST00000490393 NTN5Q8WTR8 489 aaPredicted RBP9.1□□□□□ -0.95
RIPPLY3-203ENST00000490393 DYNC2H1Q8NCM8 4307 aaKnown RBP9.09□□□□□ -0.95
RIPPLY3-203ENST00000490393 IGKV2-28A0A075B6P5 120 aa9.08□□□□□ -0.96
RIPPLY3-203ENST00000490393 IGKV2D-28P01615 120 aa9.08□□□□□ -0.96
RIPPLY3-203ENST00000490393 UNQ6190/PRO20217Q6UXQ8 127 aa9.08□□□□□ -0.96
RIPPLY3-203ENST00000490393 C1orf43Q9BWL3 253 aa9.08□□□□□ -0.96
RIPPLY3-203ENST00000490393 WFDC2Q14508 124 aa9.08□□□□□ -0.96
RIPPLY3-203ENST00000490393 C6orf223Q8N319 242 aa9.08□□□□□ -0.96
RIPPLY3-203ENST00000490393 F8WDY8 70 aa9.07□□□□□ -0.96
RIPPLY3-203ENST00000490393 NDUFC2O95298 119 aa9.07□□□□□ -0.96
RIPPLY3-203ENST00000490393 ATXN8Q156A1 80 aa9.07□□□□□ -0.96
RIPPLY3-203ENST00000490393 C10orf25Q5T742 122 aa9.07□□□□□ -0.96
RIPPLY3-203ENST00000490393 OCIAD2Q56VL3 154 aa9.06□□□□□ -0.96
RIPPLY3-203ENST00000490393 DNAH1Q9P2D7 4330 aa9.06□□□□□ -0.96
RIPPLY3-203ENST00000490393 LINC00337Q8N6G1 96 aa9.06□□□□□ -0.96
RIPPLY3-203ENST00000490393 SVIPQ8NHG7 77 aa9.06□□□□□ -0.96
RIPPLY3-203ENST00000490393 C2orf48Q96LS8 159 aa9.06□□□□□ -0.96
RIPPLY3-203ENST00000490393 LINC01600Q96MT4 127 aa9.06□□□□□ -0.96
RIPPLY3-203ENST00000490393 M0QXV9 152 aa9.05□□□□□ -0.96
RIPPLY3-203ENST00000490393 RPL28P46779 137 aaKnown RBP9.05□□□□□ -0.96
RIPPLY3-203ENST00000490393 C9orf116Q5BN46 136 aaPredicted RBP9.05□□□□□ -0.96
RIPPLY3-203ENST00000490393 IGKV2D-24A0A075B6R9 120 aa9.04□□□□□ -0.96
RIPPLY3-203ENST00000490393 ZNF561-AS1K7EIQ3 104 aa9.04□□□□□ -0.96
RIPPLY3-203ENST00000490393 SMCPP49901 116 aaPredicted RBP9.04□□□□□ -0.96
RIPPLY3-203ENST00000490393 C15orf56Q8N910 161 aa9.04□□□□□ -0.96
RIPPLY3-203ENST00000490393 LINC00526Q96FQ7 95 aa9.04□□□□□ -0.96
RIPPLY3-203ENST00000490393 COL7A1Q02388 2944 aa9.03□□□□□ -0.96
RIPPLY3-203ENST00000490393 C6orf48Q9UBA6 75 aa9.03□□□□□ -0.96
RIPPLY3-203ENST00000490393 APLNQ9ULZ1 77 aa9.03□□□□□ -0.96
RIPPLY3-203ENST00000490393 K7ERU9 68 aa9.02□□□□□ -0.96
RIPPLY3-203ENST00000490393 LST1O00453 97 aa9.02□□□□□ -0.96
RIPPLY3-203ENST00000490393 LINC01620Q4KN68 170 aa9.02□□□□□ -0.96
RIPPLY3-203ENST00000490393 RMI2Q96E14 147 aa9.02□□□□□ -0.97
RIPPLY3-203ENST00000490393 KRTAP21-3Q3LHN1 58 aa9.01□□□□□ -0.97
RIPPLY3-203ENST00000490393 MTURNQ8N3F0 131 aa9.01□□□□□ -0.97
RIPPLY3-203ENST00000490393 CAMK2N2Q96S95 79 aa9.01□□□□□ -0.97
RIPPLY3-203ENST00000490393 ETDBQ3ZM63 59 aa9□□□□□ -0.97
RIPPLY3-203ENST00000490393 HIGD2BQ4VC39 106 aa9□□□□□ -0.97
RIPPLY3-203ENST00000490393 TRBV10-2A0A0K0K1G8 114 aa9□□□□□ -0.97
RIPPLY3-203ENST00000490393 C9JAW5 83 aa9□□□□□ -0.97
RIPPLY3-203ENST00000490393 SLC25A20O43772 301 aa9□□□□□ -0.97
RIPPLY3-203ENST00000490393 SMIM11BQ8TCY0 68 aa9□□□□□ -0.97
RIPPLY3-203ENST00000490393 CLEC2BQ92478 149 aa9□□□□□ -0.97
RIPPLY3-203ENST00000490393 Q9HAA7 133 aa9□□□□□ -0.97
RIPPLY3-203ENST00000490393 DNHD1Q96M86 4753 aa8.99□□□□□ -0.97
RIPPLY3-203ENST00000490393 H0YGX0 51 aa8.98□□□□□ -0.97
RIPPLY3-203ENST00000490393 Q6ZRU5 148 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms