RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PHF5AQ7RTV0 110 aaKnown RBP10.82□□□□□ -0.68
SEC13-218ENST00000490283 Q8IZM0 81 aa10.82□□□□□ -0.68
SEC13-218ENST00000490283 NDUFC2-KCTD14E9PQ53 114 aa10.81□□□□□ -0.68
SEC13-218ENST00000490283 FAM19A5Q7Z5A7 132 aaPredicted RBP10.81□□□□□ -0.68
SEC13-218ENST00000490283 LINC00469Q8N7U9 141 aa10.81□□□□□ -0.68
SEC13-218ENST00000490283 CDKN2A-AS1Q9UH64 79 aa10.81□□□□□ -0.68
SEC13-218ENST00000490283 LINC01546A6NGU7 62 aa10.8□□□□□ -0.68
SEC13-218ENST00000490283 MT1HL1P0DM35 61 aa10.8□□□□□ -0.68
SEC13-218ENST00000490283 PSORS1C2Q9UIG4 136 aa10.8□□□□□ -0.68
SEC13-218ENST00000490283 PLA2G2DQ9UNK4 145 aa10.8□□□□□ -0.68
SEC13-218ENST00000490283 APOC3P02656 99 aa10.79□□□□□ -0.68
SEC13-218ENST00000490283 FAM168BA1KXE4 195 aa10.78□□□□□ -0.68
SEC13-218ENST00000490283 SNAPINO95295 136 aa10.78□□□□□ -0.68
SEC13-218ENST00000490283 CXCL5P42830 114 aa10.78□□□□□ -0.68
SEC13-218ENST00000490283 C1orf137Q5JT78 98 aa10.78□□□□□ -0.68
SEC13-218ENST00000490283 SVBPQ8N300 66 aa10.78□□□□□ -0.68
SEC13-218ENST00000490283 LINC01600Q96MT4 127 aa10.78□□□□□ -0.68
SEC13-218ENST00000490283 TRAPPC1Q9Y5R8 145 aa10.78□□□□□ -0.68
SEC13-218ENST00000490283 TINCRA0A1B0GVN0 87 aa10.77□□□□□ -0.69
SEC13-218ENST00000490283 SRSF9Q13242 221 aaKnown RBP eCLIP10.77□□□□□ -0.69
SEC13-218ENST00000490283 F8VRH5 84 aa10.76□□□□□ -0.69
SEC13-218ENST00000490283 M0QXV9 152 aa10.76□□□□□ -0.69
SEC13-218ENST00000490283 UBE2BP63146 152 aa10.76□□□□□ -0.69
SEC13-218ENST00000490283 PMVKQ15126 192 aa10.76□□□□□ -0.69
SEC13-218ENST00000490283 PDZD11Q5EBL8 140 aa10.75□□□□□ -0.69
SEC13-218ENST00000490283 CST9LQ9H4G1 147 aa10.75□□□□□ -0.69
SEC13-218ENST00000490283 SMIM1B2RUZ4 78 aa10.73□□□□□ -0.69
SEC13-218ENST00000490283 H3BRM9 83 aa10.73□□□□□ -0.69
SEC13-218ENST00000490283 COX7B2Q8TF08 81 aa10.73□□□□□ -0.69
SEC13-218ENST00000490283 IGLV5-45A0A087WSX0 123 aa10.72□□□□□ -0.69
SEC13-218ENST00000490283 LINC00614P0C842 121 aa10.72□□□□□ -0.69
SEC13-218ENST00000490283 NDUFA6P56556 154 aa10.72□□□□□ -0.69
SEC13-218ENST00000490283 RAB5BP61020 215 aa10.72□□□□□ -0.69
SEC13-218ENST00000490283 C9orf129Q5T035 196 aaKnown RBP10.72□□□□□ -0.69
SEC13-218ENST00000490283 C18orf32Q8TCD1 76 aa10.72□□□□□ -0.69
SEC13-218ENST00000490283 IGLV7-43P04211 117 aa10.71□□□□□ -0.69
SEC13-218ENST00000490283 HBDP02042 147 aa10.7□□□□□ -0.7
SEC13-218ENST00000490283 SPINK8P0C7L1 97 aa10.7□□□□□ -0.7
SEC13-218ENST00000490283 DIRC1Q969H9 104 aa10.7□□□□□ -0.7
SEC13-218ENST00000490283 XAGE1AQ9HD64 81 aa10.69□□□□□ -0.7
SEC13-218ENST00000490283 LBHQ53QV2 105 aaPredicted RBP10.68□□□□□ -0.7
SEC13-218ENST00000490283 KRTAP7-1Q8IUC3 87 aa10.68□□□□□ -0.7
SEC13-218ENST00000490283 ATP5LO75964 103 aa10.67□□□□□ -0.7
SEC13-218ENST00000490283 IGLC3P0DOY3 106 aa10.66□□□□□ -0.7
SEC13-218ENST00000490283 A0A096LNJ9 63 aa10.65□□□□□ -0.7
SEC13-218ENST00000490283 KRTAP10-8P60410 259 aa10.65□□□□□ -0.7
SEC13-218ENST00000490283 PMCHL1Q16048 86 aa10.65□□□□□ -0.7
SEC13-218ENST00000490283 KRTAP11-1Q8IUC1 163 aa10.65□□□□□ -0.7
SEC13-218ENST00000490283 URB1-AS1Q96HZ7 61 aa10.65□□□□□ -0.7
SEC13-218ENST00000490283 C22orf24Q9Y442 160 aa10.65□□□□□ -0.7
SEC13-218ENST00000490283 H0Y9J4 135 aa10.64□□□□□ -0.71
SEC13-218ENST00000490283 TP73-AS1Q9UF72 201 aa10.63□□□□□ -0.71
SEC13-218ENST00000490283 HMCN2Q8NDA2 5059 aa10.63□□□□□ -0.71
SEC13-218ENST00000490283 NUPR1O60356 82 aa10.62□□□□□ -0.71
SEC13-218ENST00000490283 ODF1Q14990 250 aa10.62□□□□□ -0.71
SEC13-218ENST00000490283 MRPL55Q7Z7F7 128 aaKnown RBP10.62□□□□□ -0.71
SEC13-218ENST00000490283 BAGE3Q86Y29 109 aa10.62□□□□□ -0.71
SEC13-218ENST00000490283 ZNF22P17026 224 aaPredicted RBP10.61□□□□□ -0.71
SEC13-218ENST00000490283 CHCHD1Q96BP2 118 aaKnown RBP10.61□□□□□ -0.71
SEC13-218ENST00000490283 TNXBP22105 4242 aa10.6□□□□□ -0.71
SEC13-218ENST00000490283 IGLV5-39A0A0G2JS06 123 aa10.6□□□□□ -0.71
SEC13-218ENST00000490283 TMEM170BQ5T4T1 132 aa10.6□□□□□ -0.71
SEC13-218ENST00000490283 SFTA2Q6UW10 78 aa10.59□□□□□ -0.71
SEC13-218ENST00000490283 NKAPP1Q8N9T2 125 aa10.59□□□□□ -0.71
SEC13-218ENST00000490283 YPEL4Q96NS1 127 aa10.58□□□□□ -0.72
SEC13-218ENST00000490283 CHTOPQ9Y3Y2 248 aaKnown RBP10.58□□□□□ -0.72
SEC13-218ENST00000490283 C11orf86A6NJI1 115 aa10.57□□□□□ -0.72
SEC13-218ENST00000490283 PFN2P35080 140 aa10.57□□□□□ -0.72
SEC13-218ENST00000490283 CBLN2Q8IUK8 224 aa10.57□□□□□ -0.72
SEC13-218ENST00000490283 ZNF861PO60384 105 aa10.56□□□□□ -0.72
SEC13-218ENST00000490283 IFI27L1Q96BM0 104 aa10.56□□□□□ -0.72
SEC13-218ENST00000490283 IGLV1-50A0A075B6I6 118 aa10.55□□□□□ -0.72
SEC13-218ENST00000490283 HSBP1O75506 76 aa10.55□□□□□ -0.72
SEC13-218ENST00000490283 COX17Q14061 63 aa10.55□□□□□ -0.72
SEC13-218ENST00000490283 PRR26Q8N8Z3 221 aa10.55□□□□□ -0.72
SEC13-218ENST00000490283 ERG28Q9UKR5 140 aa10.55□□□□□ -0.72
SEC13-218ENST00000490283 IGLV5-37A0A075B6J1 123 aa10.54□□□□□ -0.72
SEC13-218ENST00000490283 TRAV12-1A0A0B4J245 112 aa10.54□□□□□ -0.72
SEC13-218ENST00000490283 GAGE10A6NGK3 116 aa10.54□□□□□ -0.72
SEC13-218ENST00000490283 RPL28P46779 137 aaKnown RBP10.54□□□□□ -0.72
SEC13-218ENST00000490283 LINC00167Q96N53 147 aa10.54□□□□□ -0.72
SEC13-218ENST00000490283 RPL37AP8A6NKH3 93 aa10.53□□□□□ -0.72
SEC13-218ENST00000490283 BCE1O60756 84 aa10.53□□□□□ -0.72
SEC13-218ENST00000490283 RPL13AP40429 203 aaKnown RBP10.52□□□□□ -0.73
SEC13-218ENST00000490283 ZNF625Q96I27 306 aaPredicted RBP10.52□□□□□ -0.73
SEC13-218ENST00000490283 RPL24P83731 157 aaKnown RBP10.51□□□□□ -0.73
SEC13-218ENST00000490283 TRGC2P03986 189 aa10.5□□□□□ -0.73
SEC13-218ENST00000490283 SND1-IT1Q9HBX3 110 aa10.5□□□□□ -0.73
SEC13-218ENST00000490283 KRTAP1-4P0C5Y4 121 aa10.49□□□□□ -0.73
SEC13-218ENST00000490283 FAM19A2Q8N3H0 131 aa10.49□□□□□ -0.73
SEC13-218ENST00000490283 TMEM223A0PJW6 202 aa10.48□□□□□ -0.73
SEC13-218ENST00000490283 UBE2AP49459 152 aa10.48□□□□□ -0.73
SEC13-218ENST00000490283 LINC00158P58513 81 aa10.48□□□□□ -0.73
SEC13-218ENST00000490283 IGKV2-28A0A075B6P5 120 aa10.47□□□□□ -0.73
SEC13-218ENST00000490283 ATP6V1G1O75348 118 aa10.47□□□□□ -0.73
SEC13-218ENST00000490283 IGKV2D-28P01615 120 aa10.47□□□□□ -0.73
SEC13-218ENST00000490283 H0Y8G0 127 aa10.46□□□□□ -0.73
SEC13-218ENST00000490283 LEPROTL1O95214 131 aa10.46□□□□□ -0.73
SEC13-218ENST00000490283 SLC7A5P1Q8MH63 180 aa10.46□□□□□ -0.73
SEC13-218ENST00000490283 VPREB1P12018 145 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms