RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 NRXN1Q9ULB1 1477 aa0.46□□□□□ -2.34
NF1-213ENST00000489712 MYH4Q9Y623 1939 aa0.46□□□□□ -2.34
NF1-213ENST00000489712 PAPPAQ13219 1627 aa0.46□□□□□ -2.34
NF1-213ENST00000489712 BIVM-ERCC5R4GMW8 1640 aa0.46□□□□□ -2.34
NF1-213ENST00000489712 CUX1P39880 1505 aa0.45□□□□□ -2.34
NF1-213ENST00000489712 LINC00959A0A1B0GUT2 108 aa0.45□□□□□ -2.34
NF1-213ENST00000489712 I3L2K1 104 aa0.45□□□□□ -2.34
NF1-213ENST00000489712 PRH1P02810 166 aa0.45□□□□□ -2.34
NF1-213ENST00000489712 HMGN2P05204 90 aaKnown RBP0.45□□□□□ -2.34
NF1-213ENST00000489712 SNRPFP62306 86 aaKnown RBP0.45□□□□□ -2.34
NF1-213ENST00000489712 SHPRHQ149N8 1683 aa0.45□□□□□ -2.34
NF1-213ENST00000489712 CEP162Q5TB80 1403 aa0.45□□□□□ -2.34
NF1-213ENST00000489712 UACAQ9BZF9 1416 aa0.45□□□□□ -2.34
NF1-213ENST00000489712 MYO3AQ8NEV4 1616 aa0.45□□□□□ -2.34
NF1-213ENST00000489712 FAM208BQ5VWN6 2430 aa0.45□□□□□ -2.34
NF1-213ENST00000489712 AHCTF1Q8WYP5 2266 aa0.44□□□□□ -2.34
NF1-213ENST00000489712 APCP25054 2843 aa0.44□□□□□ -2.34
NF1-213ENST00000489712 C5P01031 1676 aa0.44□□□□□ -2.34
NF1-213ENST00000489712 COX8AP10176 69 aa0.44□□□□□ -2.34
NF1-213ENST00000489712 COX6B1P14854 86 aa0.44□□□□□ -2.34
NF1-213ENST00000489712 WFDC2Q14508 124 aa0.44□□□□□ -2.34
NF1-213ENST00000489712 PLGLAQ15195 96 aa0.44□□□□□ -2.34
NF1-213ENST00000489712 SMR3AQ99954 134 aa0.44□□□□□ -2.34
NF1-213ENST00000489712 LAMC1P11047 1609 aa0.44□□□□□ -2.34
NF1-213ENST00000489712 NHSL1Q5SYE7 1610 aa0.44□□□□□ -2.34
NF1-213ENST00000489712 CCDC18Q5T9S5 1454 aa0.43□□□□□ -2.34
NF1-213ENST00000489712 TARBP1Q13395 1621 aaKnown RBP0.43□□□□□ -2.34
NF1-213ENST00000489712 KANTRA0A1W2PQU2 76 aa0.43□□□□□ -2.34
NF1-213ENST00000489712 ACYP1P07311 99 aa0.43□□□□□ -2.34
NF1-213ENST00000489712 DEFB123Q8N688 67 aa0.43□□□□□ -2.34
NF1-213ENST00000489712 CACNA1HO95180 2353 aa0.43□□□□□ -2.34
NF1-213ENST00000489712 KMT2DO14686 5537 aa0.43□□□□□ -2.34
NF1-213ENST00000489712 CRYBG1Q9Y4K1 1723 aa0.43□□□□□ -2.34
NF1-213ENST00000489712 TTC28Q96AY4 2481 aa0.43□□□□□ -2.34
NF1-213ENST00000489712 TULP4Q9NRJ4 1543 aa0.43□□□□□ -2.34
NF1-213ENST00000489712 TNCP24821 2201 aa0.42□□□□□ -2.34
NF1-213ENST00000489712 PPLO60437 1756 aa0.42□□□□□ -2.34
NF1-213ENST00000489712 MDN1Q9NU22 5596 aa0.42□□□□□ -2.34
NF1-213ENST00000489712 SUPT6HQ7KZ85 1726 aaKnown RBP0.42□□□□□ -2.34
NF1-213ENST00000489712 NMSQ5H8A3 153 aa0.42□□□□□ -2.34
NF1-213ENST00000489712 Q5VSD8 79 aa0.42□□□□□ -2.34
NF1-213ENST00000489712 S100A13Q99584 98 aa0.42□□□□□ -2.34
NF1-213ENST00000489712 CRIPTQ9P021 101 aa0.42□□□□□ -2.34
NF1-213ENST00000489712 PAPPA2Q9BXP8 1791 aa0.42□□□□□ -2.34
NF1-213ENST00000489712 KIF20BQ96Q89 1820 aa0.41□□□□□ -2.34
NF1-213ENST00000489712 ANKRD36A6QL64 1941 aa0.41□□□□□ -2.34
NF1-213ENST00000489712 A0A1B0GUT8 65 aa0.41□□□□□ -2.34
NF1-213ENST00000489712 I3L3M4 83 aa0.41□□□□□ -2.34
NF1-213ENST00000489712 ADIRFQ15847 76 aa0.41□□□□□ -2.34
NF1-213ENST00000489712 DEFB112Q30KQ8 113 aa0.41□□□□□ -2.34
NF1-213ENST00000489712 DEFB109BQ30KR1 87 aa0.41□□□□□ -2.34
NF1-213ENST00000489712 LINC00643Q86TS7 51 aa0.41□□□□□ -2.34
NF1-213ENST00000489712 UBE2D4Q9Y2X8 147 aa0.41□□□□□ -2.34
NF1-213ENST00000489712 KIAA0556O60303 1618 aa0.41□□□□□ -2.34
NF1-213ENST00000489712 LRRC37AA6NMS7 1700 aa0.41□□□□□ -2.34
NF1-213ENST00000489712 PKD1L3Q7Z443 1732 aa0.41□□□□□ -2.34
NF1-213ENST00000489712 ZNF469Q96JG9 3925 aaPredicted RBP0.41□□□□□ -2.34
NF1-213ENST00000489712 KIF14Q15058 1648 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 MAP3K4Q9Y6R4 1608 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 SPTY2D1-AS1A0A0U1RR47 76 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 MYMXA0A1B0GTQ4 84 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 IQCF6A8MYZ5 107 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 K7EQZ3 153 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 KRTAP2-3P0C7H8 128 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 IGLC2P0DOY2 106 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 IGLC3P0DOY3 106 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 KRTAP2-4Q9BYR9 128 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 KRTAP2-1Q9BYU5 128 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 FXYD6Q9H0Q3 95 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 U3KQA8 63 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 SAMD9Q5K651 1589 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 ABCA12Q86UK0 2595 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 DNAJC13O75165 2243 aa0.4□□□□□ -2.35
NF1-213ENST00000489712 GOLGA4Q13439 2230 aaKnown RBP0.4□□□□□ -2.35
NF1-213ENST00000489712 BDP1A6H8Y1 2624 aa0.39□□□□□ -2.35
NF1-213ENST00000489712 SCRIBQ14160 1630 aa0.39□□□□□ -2.35
NF1-213ENST00000489712 CELSR2Q9HCU4 2923 aa0.39□□□□□ -2.35
NF1-213ENST00000489712 CEBPZOSA8MTT3 80 aa0.39□□□□□ -2.35
NF1-213ENST00000489712 SPINK4O60575 86 aa0.39□□□□□ -2.35
NF1-213ENST00000489712 SPRR1AP35321 89 aa0.39□□□□□ -2.35
NF1-213ENST00000489712 RPL38P63173 70 aaKnown RBP0.39□□□□□ -2.35
NF1-213ENST00000489712 COL14A1Q05707 1796 aaKnown RBP0.39□□□□□ -2.35
NF1-213ENST00000489712 ZFHX3Q15911 3703 aa0.39□□□□□ -2.35
NF1-213ENST00000489712 NEXMIFQ5QGS0 1516 aa0.38□□□□□ -2.35
NF1-213ENST00000489712 UBR1Q8IWV7 1749 aa0.38□□□□□ -2.35
NF1-213ENST00000489712 CACNA1EQ15878 2313 aa0.38□□□□□ -2.35
NF1-213ENST00000489712 PLCE1Q9P212 2302 aa0.38□□□□□ -2.35
NF1-213ENST00000489712 POLQO75417 2590 aa0.38□□□□□ -2.35
NF1-213ENST00000489712 PPRC1Q5VV67 1664 aaKnown RBP0.38□□□□□ -2.35
NF1-213ENST00000489712 MED14O60244 1454 aa0.38□□□□□ -2.35
NF1-213ENST00000489712 ST20Q9HBF5 79 aa0.38□□□□□ -2.35
NF1-213ENST00000489712 TSC2P49815 1807 aa0.38□□□□□ -2.35
NF1-213ENST00000489712 UBR3Q6ZT12 1888 aa0.37□□□□□ -2.35
NF1-213ENST00000489712 CHD9Q3L8U1 2897 aa0.37□□□□□ -2.35
NF1-213ENST00000489712 LRRC9Q6ZRR7 1453 aa0.37□□□□□ -2.35
NF1-213ENST00000489712 TPRP12270 2363 aaKnown RBP0.37□□□□□ -2.35
NF1-213ENST00000489712 CPSF4LA6NMK7 179 aaKnown RBP0.37□□□□□ -2.35
NF1-213ENST00000489712 NDUFB1O75438 58 aa0.37□□□□□ -2.35
NF1-213ENST00000489712 SPRR1BP22528 89 aa0.37□□□□□ -2.35
NF1-213ENST00000489712 TDRG1Q3Y452 100 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms