RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 GATD1Q8NB37 220 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 RPL39LQ96EH5 51 aaKnown RBP5.23□□□□□ -1.57
SSBP1-212ENST00000489378 BIN3Q9NQY0 253 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 CDC42SE2Q9NRR3 84 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 USH2AO75445 5202 aa5.22□□□□□ -1.57
SSBP1-212ENST00000489378 CTXND1A0A1B0GTU2 59 aa5.22□□□□□ -1.57
SSBP1-212ENST00000489378 LINC00337Q8N6G1 96 aa5.22□□□□□ -1.57
SSBP1-212ENST00000489378 FAM213BQ8TBF2 198 aa5.22□□□□□ -1.57
SSBP1-212ENST00000489378 MBD3L1Q8WWY6 194 aa5.22□□□□□ -1.57
SSBP1-212ENST00000489378 IMMP2LQ96T52 175 aa5.22□□□□□ -1.57
SSBP1-212ENST00000489378 MRPL35Q9NZE8 188 aaKnown RBP5.22□□□□□ -1.57
SSBP1-212ENST00000489378 TGIF2-C20orf24A0A0A6YYL0 155 aa5.21□□□□□ -1.58
SSBP1-212ENST00000489378 A0A1B0GV50 99 aa5.21□□□□□ -1.58
SSBP1-212ENST00000489378 C9JQL5 133 aa5.21□□□□□ -1.58
SSBP1-212ENST00000489378 KRTAP13-3Q3SY46 172 aa5.21□□□□□ -1.58
SSBP1-212ENST00000489378 BAGE2Q86Y30 109 aa5.21□□□□□ -1.58
SSBP1-212ENST00000489378 SMDT1Q9H4I9 107 aa5.21□□□□□ -1.58
SSBP1-212ENST00000489378 SPANXA1Q9NS26 97 aa5.21□□□□□ -1.58
SSBP1-212ENST00000489378 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
SSBP1-212ENST00000489378 MAP1LC3B2A6NCE7 125 aa5.2□□□□□ -1.58
SSBP1-212ENST00000489378 IFNA1P01562 189 aa5.2□□□□□ -1.58
SSBP1-212ENST00000489378 TLX1NBP0CAT3 122 aa5.2□□□□□ -1.58
SSBP1-212ENST00000489378 TRGC1P0CF51 173 aa5.2□□□□□ -1.58
SSBP1-212ENST00000489378 PAPPA-AS1Q5QFB9 102 aa5.2□□□□□ -1.58
SSBP1-212ENST00000489378 SIGMAR1Q99720 223 aa5.2□□□□□ -1.58
SSBP1-212ENST00000489378 TCEAL7Q9BRU2 100 aa5.2□□□□□ -1.58
SSBP1-212ENST00000489378 MAP1LC3BQ9GZQ8 125 aa5.2□□□□□ -1.58
SSBP1-212ENST00000489378 C6orf48Q9UBA6 75 aa5.2□□□□□ -1.58
SSBP1-212ENST00000489378 SDHAF1A6NFY7 115 aa5.19□□□□□ -1.58
SSBP1-212ENST00000489378 C1orf196B1AJZ1 125 aa5.19□□□□□ -1.58
SSBP1-212ENST00000489378 CLLU1Q5K131 121 aa5.19□□□□□ -1.58
SSBP1-212ENST00000489378 C9orf129Q5T035 196 aaKnown RBP5.19□□□□□ -1.58
SSBP1-212ENST00000489378 AKR1C8PQ5T2L2 129 aa5.19□□□□□ -1.58
SSBP1-212ENST00000489378 LINC00242Q5T6M2 205 aa5.19□□□□□ -1.58
SSBP1-212ENST00000489378 UNQ6190/PRO20217Q6UXQ8 127 aa5.19□□□□□ -1.58
SSBP1-212ENST00000489378 UMAD1C9J7I0 102 aa5.18□□□□□ -1.58
SSBP1-212ENST00000489378 NUPR1O60356 82 aa5.18□□□□□ -1.58
SSBP1-212ENST00000489378 RNASE13Q5GAN3 156 aaKnown RBP5.18□□□□□ -1.58
SSBP1-212ENST00000489378 LYZL1Q6UWQ5 148 aa5.18□□□□□ -1.58
SSBP1-212ENST00000489378 TRAV13-1A0A0B4J241 112 aa5.17□□□□□ -1.58
SSBP1-212ENST00000489378 NDUFA1O15239 70 aa5.17□□□□□ -1.58
SSBP1-212ENST00000489378 RPL28P46779 137 aaKnown RBP5.17□□□□□ -1.58
SSBP1-212ENST00000489378 C4orf26Q17RF5 130 aa5.17□□□□□ -1.58
SSBP1-212ENST00000489378 SMIM20Q8N5G0 67 aa5.17□□□□□ -1.58
SSBP1-212ENST00000489378 OR10D4PQ8NGN7 298 aa5.17□□□□□ -1.58
SSBP1-212ENST00000489378 ORAOV1Q8WV07 137 aa5.17□□□□□ -1.58
SSBP1-212ENST00000489378 SFT2D1Q8WV19 159 aa5.17□□□□□ -1.58
SSBP1-212ENST00000489378 MRAP2Q96G30 205 aa5.17□□□□□ -1.58
SSBP1-212ENST00000489378 LINC00862A6NCI5 91 aa5.16□□□□□ -1.58
SSBP1-212ENST00000489378 F2Z2F3 143 aa5.16□□□□□ -1.58
SSBP1-212ENST00000489378 I3L3M4 83 aa5.16□□□□□ -1.58
SSBP1-212ENST00000489378 PDE6DO43924 150 aa5.16□□□□□ -1.58
SSBP1-212ENST00000489378 TMEM241Q24JQ0 296 aa5.16□□□□□ -1.58
SSBP1-212ENST00000489378 Q6ZVQ6 151 aa5.16□□□□□ -1.58
SSBP1-212ENST00000489378 TMEM242Q9NWH2 141 aa5.16□□□□□ -1.58
SSBP1-212ENST00000489378 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
SSBP1-212ENST00000489378 BCE1O60756 84 aa5.15□□□□□ -1.58
SSBP1-212ENST00000489378 CTRLP40313 264 aa5.15□□□□□ -1.58
SSBP1-212ENST00000489378 FOXA3P55318 350 aaPredicted RBP5.15□□□□□ -1.58
SSBP1-212ENST00000489378 RPS20P60866 119 aaKnown RBP5.15□□□□□ -1.58
SSBP1-212ENST00000489378 RIGQ13278 110 aa5.15□□□□□ -1.58
SSBP1-212ENST00000489378 FP248Q71RG6 208 aaPredicted RBP5.15□□□□□ -1.58
SSBP1-212ENST00000489378 RNASE7Q9H1E1 156 aaKnown RBP5.15□□□□□ -1.58
SSBP1-212ENST00000489378 PRO0628Q9UI54 55 aa5.15□□□□□ -1.58
SSBP1-212ENST00000489378 DLEU1O43261 78 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 RAB5AP20339 215 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 TWIST1Q15672 202 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 FAM229BQ4G0N7 80 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 OR13C6PQ8NH95 151 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 GNG13Q9P2W3 67 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 C22orf24Q9Y442 160 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 TRBV20OR9-2A0A075B6H5 130 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 IGKV2D-26A0A0A0MRZ7 120 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 SMIM6P0DI80 62 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 ADCYAP1P18509 176 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 COMMD7Q86VX2 200 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 VPS25Q9BRG1 176 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 MED9Q9NWA0 146 aa5.14□□□□□ -1.59
SSBP1-212ENST00000489378 FLGP20930 4061 aaPredicted RBP5.13□□□□□ -1.59
SSBP1-212ENST00000489378 C7orf77A4D0Y5 90 aa5.13□□□□□ -1.59
SSBP1-212ENST00000489378 NDUFC2-KCTD14E9PQ53 114 aa5.13□□□□□ -1.59
SSBP1-212ENST00000489378 SRP19P09132 144 aaKnown RBP5.13□□□□□ -1.59
SSBP1-212ENST00000489378 RPL35P42766 123 aaKnown RBP5.13□□□□□ -1.59
SSBP1-212ENST00000489378 FAM231DQ6ZW35 169 aa5.13□□□□□ -1.59
SSBP1-212ENST00000489378 TRBV6-5A0A0K0K1A5 114 aa5.12□□□□□ -1.59
SSBP1-212ENST00000489378 SMKR1H3BMG3 65 aa5.12□□□□□ -1.59
SSBP1-212ENST00000489378 C1orf195Q5TG92 126 aa5.12□□□□□ -1.59
SSBP1-212ENST00000489378 Q6ZUT4 128 aa5.12□□□□□ -1.59
SSBP1-212ENST00000489378 C11orf52Q96A22 123 aa5.12□□□□□ -1.59
SSBP1-212ENST00000489378 UBE2D4Q9Y2X8 147 aa5.12□□□□□ -1.59
SSBP1-212ENST00000489378 IGHV3OR16-9A0A0B4J2B5 98 aa5.11□□□□□ -1.59
SSBP1-212ENST00000489378 KIAA0087Q14695 138 aa5.11□□□□□ -1.59
SSBP1-212ENST00000489378 CENPWQ5EE01 88 aa5.11□□□□□ -1.59
SSBP1-212ENST00000489378 C2orf82Q6UX34 121 aa5.11□□□□□ -1.59
SSBP1-212ENST00000489378 KRTAP13-1Q8IUC0 172 aa5.11□□□□□ -1.59
SSBP1-212ENST00000489378 C3orf22Q8N5N4 141 aa5.11□□□□□ -1.59
SSBP1-212ENST00000489378 CNFNQ9BYD5 112 aa5.11□□□□□ -1.59
SSBP1-212ENST00000489378 M0R2T5 61 aa5.1□□□□□ -1.59
SSBP1-212ENST00000489378 S100A8P05109 93 aa5.1□□□□□ -1.59
SSBP1-212ENST00000489378 CBLN2Q8IUK8 224 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms