RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 SFTA2Q6UW10 78 aa3.8□□□□□ -1.8
ATG4A-208ENST00000489247 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
ATG4A-208ENST00000489247 NHP2Q9NX24 153 aaKnown RBP3.8□□□□□ -1.8
ATG4A-208ENST00000489247 TRAV13-1A0A0B4J241 112 aa3.79□□□□□ -1.8
ATG4A-208ENST00000489247 LINC00959A0A1B0GUT2 108 aa3.79□□□□□ -1.8
ATG4A-208ENST00000489247 IGLL5B9A064 214 aa3.79□□□□□ -1.8
ATG4A-208ENST00000489247 G3V4G9 280 aa3.79□□□□□ -1.8
ATG4A-208ENST00000489247 K7EP34 96 aa3.79□□□□□ -1.8
ATG4A-208ENST00000489247 HERV-K104P63124 156 aa3.79□□□□□ -1.8
ATG4A-208ENST00000489247 SRSF9Q13242 221 aaKnown RBP eCLIP3.79□□□□□ -1.8
ATG4A-208ENST00000489247 MIAQ16674 131 aa3.79□□□□□ -1.8
ATG4A-208ENST00000489247 TM2D3Q9BRN9 247 aa3.79□□□□□ -1.8
ATG4A-208ENST00000489247 ICOSQ9Y6W8 199 aa3.79□□□□□ -1.8
ATG4A-208ENST00000489247 MAST4O15021 2626 aa3.79□□□□□ -1.8
ATG4A-208ENST00000489247 DYNC2H1Q8NCM8 4307 aaKnown RBP3.79□□□□□ -1.8
ATG4A-208ENST00000489247 DNAH9Q9NYC9 4486 aa3.79□□□□□ -1.8
ATG4A-208ENST00000489247 IGHV3-64A0A075B6Q5 118 aa3.78□□□□□ -1.8
ATG4A-208ENST00000489247 A0A096LPF7 62 aa3.78□□□□□ -1.8
ATG4A-208ENST00000489247 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.78□□□□□ -1.8
ATG4A-208ENST00000489247 H3BUT2 72 aa3.78□□□□□ -1.8
ATG4A-208ENST00000489247 K7ERJ3 54 aa3.78□□□□□ -1.8
ATG4A-208ENST00000489247 DEFB4AO15263 64 aa3.78□□□□□ -1.8
ATG4A-208ENST00000489247 FABP2P12104 132 aa3.78□□□□□ -1.8
ATG4A-208ENST00000489247 RPL24P83731 157 aaKnown RBP3.78□□□□□ -1.8
ATG4A-208ENST00000489247 VAMP3Q15836 100 aa3.78□□□□□ -1.8
ATG4A-208ENST00000489247 GTF2H5Q6ZYL4 71 aa3.78□□□□□ -1.8
ATG4A-208ENST00000489247 PRR34Q9NV39 138 aa3.78□□□□□ -1.8
ATG4A-208ENST00000489247 DNAH1Q9P2D7 4330 aa3.77□□□□□ -1.81
ATG4A-208ENST00000489247 STAB1Q9NY15 2570 aa3.77□□□□□ -1.81
ATG4A-208ENST00000489247 IGLV5-52A0A0A0MRZ9 124 aa3.77□□□□□ -1.81
ATG4A-208ENST00000489247 A4D1N5 150 aa3.77□□□□□ -1.81
ATG4A-208ENST00000489247 CFC1BP0CG36 223 aa3.77□□□□□ -1.81
ATG4A-208ENST00000489247 CFC1P0CG37 223 aa3.77□□□□□ -1.81
ATG4A-208ENST00000489247 SEC61BP60468 96 aaKnown RBP3.77□□□□□ -1.81
ATG4A-208ENST00000489247 ADAMTSL4-AS1Q5T5F5 129 aa3.77□□□□□ -1.81
ATG4A-208ENST00000489247 MUSTN1Q8IVN3 82 aa3.77□□□□□ -1.81
ATG4A-208ENST00000489247 COPS9Q8WXC6 57 aa3.77□□□□□ -1.81
ATG4A-208ENST00000489247 Q9H8V8 135 aa3.77□□□□□ -1.81
ATG4A-208ENST00000489247 K7EIL1 84 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 TSPAN13O95857 204 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 IGHV3-33P01772 117 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 CIRBPQ14011 172 aaKnown RBP3.76□□□□□ -1.81
ATG4A-208ENST00000489247 SS18Q15532 418 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 LYRM7Q5U5X0 104 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 CD164L2Q6UWJ8 174 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 LYPD5Q6UWN5 251 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 Q8IZM0 81 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 COX7B2Q8TF08 81 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 RAB37Q96AX2 223 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 RETNQ9HD89 108 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 PRO1854Q9UHT4 67 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 SPCS1Q9Y6A9 102 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 COL6A5A8TX70 2615 aa3.76□□□□□ -1.81
ATG4A-208ENST00000489247 LOC107984156A0A0G2JMH3 177 aa3.75□□□□□ -1.81
ATG4A-208ENST00000489247 IBA57-AS1B1ANH7 110 aa3.75□□□□□ -1.81
ATG4A-208ENST00000489247 TMEM262E9PQX1 116 aa3.75□□□□□ -1.81
ATG4A-208ENST00000489247 PRSS2P07478 247 aa3.75□□□□□ -1.81
ATG4A-208ENST00000489247 CXCL5P42830 114 aa3.75□□□□□ -1.81
ATG4A-208ENST00000489247 KIAA0087Q14695 138 aa3.75□□□□□ -1.81
ATG4A-208ENST00000489247 Q6ZTC4 211 aa3.75□□□□□ -1.81
ATG4A-208ENST00000489247 ARL17AQ8IVW1 177 aa3.75□□□□□ -1.81
ATG4A-208ENST00000489247 MUC7Q8TAX7 377 aa3.75□□□□□ -1.81
ATG4A-208ENST00000489247 LINC00308Q8TCZ7 52 aa3.75□□□□□ -1.81
ATG4A-208ENST00000489247 LINC01600Q96MT4 127 aa3.75□□□□□ -1.81
ATG4A-208ENST00000489247 TRBV20-1A0A075B6N2 111 aa3.74□□□□□ -1.81
ATG4A-208ENST00000489247 TRAV8-4A0A0B4J246 113 aa3.74□□□□□ -1.81
ATG4A-208ENST00000489247 A0A0J9YWU9 116 aa3.74□□□□□ -1.81
ATG4A-208ENST00000489247 TRBV30A0A0K0K1B3 111 aa3.74□□□□□ -1.81
ATG4A-208ENST00000489247 COX7A2LO14548 114 aa3.74□□□□□ -1.81
ATG4A-208ENST00000489247 REG3AQ06141 175 aa3.74□□□□□ -1.81
ATG4A-208ENST00000489247 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
ATG4A-208ENST00000489247 NBEAL2Q6ZNJ1 2754 aa3.74□□□□□ -1.81
ATG4A-208ENST00000489247 LINC00269Q8N2A0 174 aa3.74□□□□□ -1.81
ATG4A-208ENST00000489247 C11orf45Q8TAV5 145 aa3.74□□□□□ -1.81
ATG4A-208ENST00000489247 CHCHD10Q8WYQ3 142 aaPredicted RBP3.74□□□□□ -1.81
ATG4A-208ENST00000489247 PRO0461Q9UI25 63 aa3.74□□□□□ -1.81
ATG4A-208ENST00000489247 KLK5Q9Y337 293 aaPredicted RBP3.74□□□□□ -1.81
ATG4A-208ENST00000489247 DNHD1Q96M86 4753 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 DEFB131BA0A096LNP1 70 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 TRAV10A0A0B4J240 114 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 F8W1H4 67 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 M0QXV9 152 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 APOMO95445 188 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 HTN3P15516 51 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 LINC01556Q5JQF7 62 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 KRTAP26-1Q6PEX3 210 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 ENHOQ6UWT2 76 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 SOSTDC1Q6X4U4 206 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 C5orf38Q86SI9 138 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 C15orf53Q8NAA6 179 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 NAA38Q9BRA0 125 aaKnown RBP3.73□□□□□ -1.81
ATG4A-208ENST00000489247 ERG28Q9UKR5 140 aa3.73□□□□□ -1.81
ATG4A-208ENST00000489247 GVQW2A0A096LPI5 108 aaPredicted RBP3.72□□□□□ -1.81
ATG4A-208ENST00000489247 ANGP03950 147 aaKnown RBP3.72□□□□□ -1.81
ATG4A-208ENST00000489247 DNAH10OSP0CZ25 163 aa3.72□□□□□ -1.81
ATG4A-208ENST00000489247 VPREB1P12018 145 aa3.72□□□□□ -1.81
ATG4A-208ENST00000489247 XCL1P47992 114 aa3.72□□□□□ -1.81
ATG4A-208ENST00000489247 NANOS2P60321 138 aaKnown RBP3.72□□□□□ -1.81
ATG4A-208ENST00000489247 COX17Q14061 63 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms