RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 TNP1P09430 55 aa-1.1□□□□□ -2.59
CCDC93-209ENST00000488908 TMEM170BQ5T4T1 132 aa-1.1□□□□□ -2.59
CCDC93-209ENST00000488908 Q6JHZ5 121 aa-1.1□□□□□ -2.59
CCDC93-209ENST00000488908 SELENOSQ9BQE4 189 aa-1.1□□□□□ -2.59
CCDC93-209ENST00000488908 TMEM2Q9UHN6 1383 aa-1.1□□□□□ -2.59
CCDC93-209ENST00000488908 KDM5AP29375 1690 aaKnown RBP-1.1□□□□□ -2.59
CCDC93-209ENST00000488908 CFAP47Q6ZTR5 3102 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 PAPPA2Q9BXP8 1791 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 MRC1P22897 1456 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 CCDC141Q6ZP82 1450 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 FYCO1Q9BQS8 1478 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 DOCK1Q14185 1865 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 FMN2Q9NZ56 1722 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 NWD2Q9ULI1 1742 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 SETBP1Q9Y6X0 1596 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 CCL22O00626 93 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 MGPP08493 103 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 BTG2P78543 158 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 PRLHP81277 87 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 CCDC153Q494R4 210 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 WFDC13Q8IUB5 93 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 PSMG3Q9BT73 122 aaPredicted RBP-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 NDUFA4L2Q9NRX3 87 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 CRIPTQ9P021 101 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 GINS2Q9Y248 185 aa-1.11□□□□□ -2.59
CCDC93-209ENST00000488908 MAGI2Q86UL8 1455 aa-1.12□□□□□ -2.59
CCDC93-209ENST00000488908 CDC42BPAQ5VT25 1732 aa-1.12□□□□□ -2.59
CCDC93-209ENST00000488908 LINC00959A0A1B0GUT2 108 aa-1.12□□□□□ -2.59
CCDC93-209ENST00000488908 SNCGO76070 127 aa-1.12□□□□□ -2.59
CCDC93-209ENST00000488908 PP6455Q8WZ26 134 aa-1.12□□□□□ -2.59
CCDC93-209ENST00000488908 SPTSSAQ969W0 71 aa-1.12□□□□□ -2.59
CCDC93-209ENST00000488908 HIGD1BQ9P298 99 aa-1.12□□□□□ -2.59
CCDC93-209ENST00000488908 HMGXB3Q12766 1538 aa-1.12□□□□□ -2.59
CCDC93-209ENST00000488908 ALKQ9UM73 1620 aa-1.12□□□□□ -2.59
CCDC93-209ENST00000488908 DNAH14Q0VDD8 3507 aa-1.12□□□□□ -2.59
CCDC93-209ENST00000488908 PBRM1Q86U86 1689 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 CDK5RAP2Q96SN8 1893 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 UNC80Q8N2C7 3258 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 MMP24-AS1A0A0U1RRL7 71 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 LINC01546A6NGU7 62 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 FAM223BA6NKX1 122 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 NDUFB6O95139 128 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 SIX6O95475 246 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 FABP1P07148 127 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 HIST1H1AQ02539 215 aaPredicted RBP-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 MORN2Q502X0 79 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 SEC11CQ9BY50 192 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 TPT1P8Q9HAU6 139 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 UBE2D4Q9Y2X8 147 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 LENEPQ9Y5L5 61 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 CEP250Q9BV73 2442 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 ZNF236Q9UL36 1845 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 SYNJ1O43426 1573 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 VCANP13611 3396 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 VPS13CQ709C8 3753 aa-1.13□□□□□ -2.59
CCDC93-209ENST00000488908 KIAA0556O60303 1618 aa-1.14□□□□□ -2.59
CCDC93-209ENST00000488908 MYH6P13533 1939 aa-1.14□□□□□ -2.59
CCDC93-209ENST00000488908 B2MP61769 119 aa-1.14□□□□□ -2.59
CCDC93-209ENST00000488908 RRAS2P62070 204 aaPredicted RBP-1.14□□□□□ -2.59
CCDC93-209ENST00000488908 Q6ZUT4 128 aa-1.14□□□□□ -2.59
CCDC93-209ENST00000488908 TTC9CQ8N5M4 171 aa-1.14□□□□□ -2.59
CCDC93-209ENST00000488908 AQP10Q96PS8 301 aa-1.14□□□□□ -2.59
CCDC93-209ENST00000488908 V9GYH0 126 aa-1.14□□□□□ -2.59
CCDC93-209ENST00000488908 OVOS2A0A0J9YW53 1432 aa-1.15□□□□□ -2.59
CCDC93-209ENST00000488908 OVOS2Q6IE36 1432 aa-1.15□□□□□ -2.59
CCDC93-209ENST00000488908 IFT140Q96RY7 1462 aa-1.15□□□□□ -2.59
CCDC93-209ENST00000488908 PITX3O75364 302 aa-1.15□□□□□ -2.59
CCDC93-209ENST00000488908 APOC3P02656 99 aa-1.15□□□□□ -2.59
CCDC93-209ENST00000488908 SCGB1A1P11684 91 aa-1.15□□□□□ -2.59
CCDC93-209ENST00000488908 S100A7L2Q5SY68 101 aa-1.15□□□□□ -2.59
CCDC93-209ENST00000488908 SMIM15Q7Z3B0 74 aa-1.15□□□□□ -2.59
CCDC93-209ENST00000488908 DISP2A7MBM2 1401 aa-1.15□□□□□ -2.59
CCDC93-209ENST00000488908 SHANK2Q9UPX8 1470 aa-1.16□□□□□ -2.59
CCDC93-209ENST00000488908 PATJQ8NI35 1801 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 PIGBOS1A0A0B4J2F0 54 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 FAM236AA0A1B0GUQ0 79 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 UBE2L5PA0A1B0GUS4 154 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 FAM236BA0A1B0GV22 79 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 HCG22E2RYF7 251 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 J3QR89 54 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 M0R129 80 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 UQCR11O14957 56 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 IGLC6P0CF74 106 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 TPPP2P59282 170 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 C10orf128Q5T292 105 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 TAC4Q86UU9 113 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 BAGE2Q86Y30 109 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 FDCSPQ8NFU4 85 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 USP34Q70CQ2 3546 aa-1.16□□□□□ -2.6
CCDC93-209ENST00000488908 K7EP13 123 aa-1.17□□□□□ -2.6
CCDC93-209ENST00000488908 Q6AWC8 147 aa-1.17□□□□□ -2.6
CCDC93-209ENST00000488908 ARHGEF12Q9NZN5 1544 aa-1.17□□□□□ -2.6
CCDC93-209ENST00000488908 CLIP1P30622 1438 aa-1.17□□□□□ -2.6
CCDC93-209ENST00000488908 KIF21AQ7Z4S6 1674 aa-1.17□□□□□ -2.6
CCDC93-209ENST00000488908 ZNF518AQ6AHZ1 1483 aa-1.18□□□□□ -2.6
CCDC93-209ENST00000488908 CUX1P39880 1505 aa-1.18□□□□□ -2.6
CCDC93-209ENST00000488908 TRAV13-2A0A0B4J235 113 aa-1.18□□□□□ -2.6
CCDC93-209ENST00000488908 S100PP25815 95 aa-1.18□□□□□ -2.6
CCDC93-209ENST00000488908 DEFB136Q30KP8 78 aa-1.18□□□□□ -2.6
CCDC93-209ENST00000488908 NMSQ5H8A3 153 aa-1.18□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms