RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 FBN3Q75N90 2809 aa13.66□□□□□ -0.22
ATP1A1-208ENST00000488733 A0A1W2PPM0 123 aa13.65□□□□□ -0.22
ATP1A1-208ENST00000488733 LINC01556Q5JQF7 62 aa13.65□□□□□ -0.22
ATP1A1-208ENST00000488733 UBE2WQ96B02 151 aa13.64□□□□□ -0.23
ATP1A1-208ENST00000488733 A0A0B4J2C4 111 aa13.64□□□□□ -0.23
ATP1A1-208ENST00000488733 GAGE12HA6NDE8 117 aa13.64□□□□□ -0.23
ATP1A1-208ENST00000488733 FABP2P12104 132 aa13.64□□□□□ -0.23
ATP1A1-208ENST00000488733 NAA38Q9BRA0 125 aaKnown RBP13.63□□□□□ -0.23
ATP1A1-208ENST00000488733 PPDPFQ9H3Y8 114 aa13.63□□□□□ -0.23
ATP1A1-208ENST00000488733 PRO1854Q9UHT4 67 aa13.63□□□□□ -0.23
ATP1A1-208ENST00000488733 IBA57-AS1B1ANH7 110 aa13.61□□□□□ -0.23
ATP1A1-208ENST00000488733 CXCL5P42830 114 aa13.61□□□□□ -0.23
ATP1A1-208ENST00000488733 GTF2H5Q6ZYL4 71 aa13.61□□□□□ -0.23
ATP1A1-208ENST00000488733 PGPEP1Q9NXJ5 209 aa13.61□□□□□ -0.23
ATP1A1-208ENST00000488733 KLK5Q9Y337 293 aaPredicted RBP13.61□□□□□ -0.23
ATP1A1-208ENST00000488733 GAGE10A6NGK3 116 aa13.61□□□□□ -0.23
ATP1A1-208ENST00000488733 CCL18P55774 89 aa13.61□□□□□ -0.23
ATP1A1-208ENST00000488733 LINC00308Q8TCZ7 52 aa13.61□□□□□ -0.23
ATP1A1-208ENST00000488733 DNAH10OSP0CZ25 163 aa13.6□□□□□ -0.23
ATP1A1-208ENST00000488733 CKS1BP61024 79 aa13.6□□□□□ -0.23
ATP1A1-208ENST00000488733 CFAP161Q6P656 301 aa13.6□□□□□ -0.23
ATP1A1-208ENST00000488733 DAND5Q8N907 189 aa13.6□□□□□ -0.23
ATP1A1-208ENST00000488733 A0A0U1RRA0 63 aa13.59□□□□□ -0.23
ATP1A1-208ENST00000488733 NPC2P61916 151 aa13.59□□□□□ -0.23
ATP1A1-208ENST00000488733 KIAA0087Q14695 138 aa13.59□□□□□ -0.23
ATP1A1-208ENST00000488733 K7EP34 96 aa13.57□□□□□ -0.24
ATP1A1-208ENST00000488733 TSPAN13O95857 204 aa13.57□□□□□ -0.24
ATP1A1-208ENST00000488733 LINC00588Q9Y4M8 146 aa13.57□□□□□ -0.24
ATP1A1-208ENST00000488733 SPCS1Q9Y6A9 102 aa13.57□□□□□ -0.24
ATP1A1-208ENST00000488733 LINC00158P58513 81 aa13.56□□□□□ -0.24
ATP1A1-208ENST00000488733 ERG28Q9UKR5 140 aa13.56□□□□□ -0.24
ATP1A1-208ENST00000488733 EIF4EBP3O60516 100 aaPredicted RBP13.54□□□□□ -0.24
ATP1A1-208ENST00000488733 MIR7-3HGQ8N6C7 128 aa13.54□□□□□ -0.24
ATP1A1-208ENST00000488733 LYRM7Q5U5X0 104 aa13.53□□□□□ -0.24
ATP1A1-208ENST00000488733 C2orf82Q6UX34 121 aa13.53□□□□□ -0.24
ATP1A1-208ENST00000488733 UPK3BQ9BT76 320 aa13.53□□□□□ -0.24
ATP1A1-208ENST00000488733 SPAG11BQ08648 103 aa13.53□□□□□ -0.24
ATP1A1-208ENST00000488733 COX17Q14061 63 aa13.53□□□□□ -0.24
ATP1A1-208ENST00000488733 KRTAP26-1Q6PEX3 210 aa13.53□□□□□ -0.24
ATP1A1-208ENST00000488733 SOSTDC1Q6X4U4 206 aa13.53□□□□□ -0.24
ATP1A1-208ENST00000488733 C1orf43Q9BWL3 253 aa13.53□□□□□ -0.24
ATP1A1-208ENST00000488733 NUPR2A6NF83 97 aa13.52□□□□□ -0.25
ATP1A1-208ENST00000488733 PFN2P35080 140 aa13.51□□□□□ -0.25
ATP1A1-208ENST00000488733 LOC107984156A0A0G2JMH3 177 aa13.49□□□□□ -0.25
ATP1A1-208ENST00000488733 ARL17AQ8IVW1 177 aa13.49□□□□□ -0.25
ATP1A1-208ENST00000488733 DYNC2H1Q8NCM8 4307 aaKnown RBP13.48□□□□□ -0.25
ATP1A1-208ENST00000488733 Q1RN00 199 aa13.47□□□□□ -0.25
ATP1A1-208ENST00000488733 MUC7Q8TAX7 377 aa13.47□□□□□ -0.25
ATP1A1-208ENST00000488733 IGKV2D-24A0A075B6R9 120 aa13.47□□□□□ -0.25
ATP1A1-208ENST00000488733 APLNQ9ULZ1 77 aa13.47□□□□□ -0.25
ATP1A1-208ENST00000488733 H7C2G1 150 aa13.46□□□□□ -0.25
ATP1A1-208ENST00000488733 PSMB2P49721 201 aa13.46□□□□□ -0.25
ATP1A1-208ENST00000488733 NTN5Q8WTR8 489 aaPredicted RBP13.46□□□□□ -0.25
ATP1A1-208ENST00000488733 SND1-IT1Q9HBX3 110 aa13.45□□□□□ -0.26
ATP1A1-208ENST00000488733 TRBV30A0A0K0K1B3 111 aa13.44□□□□□ -0.26
ATP1A1-208ENST00000488733 ZNF561-AS1K7EIQ3 104 aa13.44□□□□□ -0.26
ATP1A1-208ENST00000488733 TRBV20-1A0A075B6N2 111 aa13.44□□□□□ -0.26
ATP1A1-208ENST00000488733 GVQW2A0A096LPI5 108 aaPredicted RBP13.44□□□□□ -0.26
ATP1A1-208ENST00000488733 SCGB1C2P0DMR2 95 aa13.44□□□□□ -0.26
ATP1A1-208ENST00000488733 RPL13AP40429 203 aaKnown RBP13.44□□□□□ -0.26
ATP1A1-208ENST00000488733 C6orf223Q8N319 242 aa13.44□□□□□ -0.26
ATP1A1-208ENST00000488733 RMI2Q96E14 147 aa13.44□□□□□ -0.26
ATP1A1-208ENST00000488733 DNAH7Q8WXX0 4024 aa13.43□□□□□ -0.26
ATP1A1-208ENST00000488733 UNQ6190/PRO20217Q6UXQ8 127 aa13.43□□□□□ -0.26
ATP1A1-208ENST00000488733 TRAV13-2A0A0B4J235 113 aa13.42□□□□□ -0.26
ATP1A1-208ENST00000488733 F8WDY8 70 aa13.42□□□□□ -0.26
ATP1A1-208ENST00000488733 Q9HAA7 133 aa13.42□□□□□ -0.26
ATP1A1-208ENST00000488733 TGP01266 2768 aa13.42□□□□□ -0.26
ATP1A1-208ENST00000488733 C10orf25Q5T742 122 aa13.41□□□□□ -0.26
ATP1A1-208ENST00000488733 C2orf48Q96LS8 159 aa13.41□□□□□ -0.26
ATP1A1-208ENST00000488733 COX6CP09669 75 aa13.4□□□□□ -0.26
ATP1A1-208ENST00000488733 C15orf56Q8N910 161 aa13.4□□□□□ -0.26
ATP1A1-208ENST00000488733 LINC00526Q96FQ7 95 aa13.4□□□□□ -0.26
ATP1A1-208ENST00000488733 H3BMG7 143 aa13.39□□□□□ -0.27
ATP1A1-208ENST00000488733 CSMD3Q7Z407 3707 aa13.39□□□□□ -0.27
ATP1A1-208ENST00000488733 C9orf116Q5BN46 136 aaPredicted RBP13.39□□□□□ -0.27
ATP1A1-208ENST00000488733 UBE2DNLQ8IWF7 75 aa13.39□□□□□ -0.27
ATP1A1-208ENST00000488733 TRIAP1O43715 76 aa13.38□□□□□ -0.27
ATP1A1-208ENST00000488733 HIGD2BQ4VC39 106 aa13.38□□□□□ -0.27
ATP1A1-208ENST00000488733 CAMK2N2Q96S95 79 aa13.38□□□□□ -0.27
ATP1A1-208ENST00000488733 F8W1H4 67 aa13.36□□□□□ -0.27
ATP1A1-208ENST00000488733 NDUFC2O95298 119 aa13.36□□□□□ -0.27
ATP1A1-208ENST00000488733 TCL1BO95988 128 aa13.36□□□□□ -0.27
ATP1A1-208ENST00000488733 WWC2-AS2Q96NR7 200 aa13.36□□□□□ -0.27
ATP1A1-208ENST00000488733 PLECQ15149 4684 aaKnown RBP13.36□□□□□ -0.27
ATP1A1-208ENST00000488733 IGKV2-28A0A075B6P5 120 aa13.36□□□□□ -0.27
ATP1A1-208ENST00000488733 IGKV2D-28P01615 120 aa13.36□□□□□ -0.27
ATP1A1-208ENST00000488733 C6orf48Q9UBA6 75 aa13.36□□□□□ -0.27
ATP1A1-208ENST00000488733 STARD9Q9P2P6 4700 aa13.35□□□□□ -0.27
ATP1A1-208ENST00000488733 LINC00337Q8N6G1 96 aa13.33□□□□□ -0.27
ATP1A1-208ENST00000488733 ATXN8Q156A1 80 aa13.32□□□□□ -0.28
ATP1A1-208ENST00000488733 TENM2Q9NT68 2774 aa13.32□□□□□ -0.28
ATP1A1-208ENST00000488733 Q6ZRU5 148 aa13.3□□□□□ -0.28
ATP1A1-208ENST00000488733 RPL28P46779 137 aaKnown RBP13.3□□□□□ -0.28
ATP1A1-208ENST00000488733 SYCNQ0VAF6 134 aa13.29□□□□□ -0.28
ATP1A1-208ENST00000488733 PRO0461Q9UI25 63 aa13.29□□□□□ -0.28
ATP1A1-208ENST00000488733 USP17L23D6RBM5 183 aa13.27□□□□□ -0.28
ATP1A1-208ENST00000488733 OR13C6PQ8NH95 151 aa13.27□□□□□ -0.28
ATP1A1-208ENST00000488733 RNF151Q2KHN1 245 aa13.26□□□□□ -0.29
ATP1A1-208ENST00000488733 NDUFC2-KCTD14E9PQ53 114 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms