RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 COL6A3P12111 3177 aa-0.35□□□□□ -2.47
R3HDM1-219ENST00000488035 FAT2Q9NYQ8 4349 aa-0.35□□□□□ -2.47
R3HDM1-219ENST00000488035 DNAJC13O75165 2243 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 PCNX1Q96RV3 2341 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 PDZD2O15018 2839 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 PCLOQ9Y6V0 5065 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 MYCBP2O75592 4640 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 TULP4Q9NRJ4 1543 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 TMEM218A2RU14 115 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 ARMS2P0C7Q2 107 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 GNG4P50150 75 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 KRTDAPP60985 99 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 PSMG4Q5JS54 123 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 GTF2H5Q6ZYL4 71 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 WFDC13Q8IUB5 93 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 C9orf62Q8N4C0 152 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 CACFD1Q9UGQ2 172 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 HERC1Q15751 4861 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 ADGRL2O95490 1459 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 PLEKHH2Q8IVE3 1493 aa-0.36□□□□□ -2.47
R3HDM1-219ENST00000488035 TET3O43151 1660 aa-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 EHBP1L1Q8N3D4 1523 aa-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 SPTY2D1-AS1A0A0U1RR47 76 aa-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 H0Y9P7 68 aa-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 CORTO00230 105 aa-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 DLEU1O43261 78 aa-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 SPRR2AP35326 72 aa-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 CGREF1Q99674 301 aa-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 MRPL34Q9BQ48 92 aaKnown RBP-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 CDKN2A-AS1Q9UH64 79 aa-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 IER3IP1Q9Y5U9 82 aa-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 SBF2Q86WG5 1849 aa-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 FAT1Q14517 4588 aa-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 STAB2Q8WWQ8 2551 aa-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 SETD2Q9BYW2 2564 aaPredicted RBP-0.37□□□□□ -2.47
R3HDM1-219ENST00000488035 SMG6Q86US8 1419 aaKnown RBP-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 RAPGEF6Q8TEU7 1601 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 BTAF1O14981 1849 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 PATJQ8NI35 1801 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 TRBV7-7A0A0K0K1E9 115 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 H3BNG1 76 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 SPRR2EP22531 72 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 MT4P47944 62 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 PMCHL1Q16048 86 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 LINC00846Q9NV44 126 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 AP4S1Q9Y587 144 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 A2ML1A8K2U0 1454 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 ROBO1Q9Y6N7 1651 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 MAP1AP78559 2803 aaPredicted RBP-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 PSME4Q14997 1843 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 FMN2Q9NZ56 1722 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 KIAA0556O60303 1618 aa-0.38□□□□□ -2.47
R3HDM1-219ENST00000488035 ARHGEF5Q12774 1597 aa-0.39□□□□□ -2.47
R3HDM1-219ENST00000488035 NKTRP30414 1462 aaKnown RBP-0.39□□□□□ -2.47
R3HDM1-219ENST00000488035 COL5A1-AS1Q5SY13 56 aa-0.39□□□□□ -2.47
R3HDM1-219ENST00000488035 PSENENQ9NZ42 101 aa-0.39□□□□□ -2.47
R3HDM1-219ENST00000488035 PHLPP1O60346 1717 aa-0.39□□□□□ -2.47
R3HDM1-219ENST00000488035 BSNQ9UPA5 3926 aa-0.39□□□□□ -2.47
R3HDM1-219ENST00000488035 NF1P21359 2839 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 MYOM2P54296 1465 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 CCDC141Q6ZP82 1450 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 DOCK2Q92608 1830 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 C20orf202A1L168 122 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 LINC00587B1AMM8 73 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 D6R8Y8 96 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 CCL22O00626 93 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 LEPROTL1O95214 131 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 UQCRHP07919 91 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 IGLC2P0DOY2 106 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 IGLC3P0DOY3 106 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 FAUP35544 74 aaKnown RBP-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 S100A10P60903 97 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 MUSTN1Q8IVN3 82 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 TRGV9Q99603 122 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 PMCHL2Q9BQD1 86 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 HIGD1BQ9P298 99 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 MYOM1P52179 1685 aa-0.4□□□□□ -2.47
R3HDM1-219ENST00000488035 TOP2BQ02880 1626 aa-0.41□□□□□ -2.47
R3HDM1-219ENST00000488035 ALMS1Q8TCU4 4167 aa-0.41□□□□□ -2.47
R3HDM1-219ENST00000488035 ARHGAP5Q13017 1502 aa-0.41□□□□□ -2.48
R3HDM1-219ENST00000488035 TRBV25-1A0A075B6N4 114 aa-0.41□□□□□ -2.48
R3HDM1-219ENST00000488035 H3BQ15 152 aa-0.41□□□□□ -2.48
R3HDM1-219ENST00000488035 MRPS10P82664 201 aaKnown RBP-0.41□□□□□ -2.48
R3HDM1-219ENST00000488035 SPTBN4Q9H254 2564 aa-0.42□□□□□ -2.48
R3HDM1-219ENST00000488035 SVEP1Q4LDE5 3571 aa-0.42□□□□□ -2.48
R3HDM1-219ENST00000488035 SLIT1O75093 1534 aa-0.42□□□□□ -2.48
R3HDM1-219ENST00000488035 SCN7AQ01118 1682 aa-0.42□□□□□ -2.48
R3HDM1-219ENST00000488035 FOCADQ5VW36 1801 aa-0.42□□□□□ -2.48
R3HDM1-219ENST00000488035 NDUFA3O95167 84 aa-0.42□□□□□ -2.48
R3HDM1-219ENST00000488035 MT-ATP8P03928 68 aa-0.42□□□□□ -2.48
R3HDM1-219ENST00000488035 C2orf88Q9BSF0 95 aa-0.42□□□□□ -2.48
R3HDM1-219ENST00000488035 ABCC5O15440 1437 aa-0.42□□□□□ -2.48
R3HDM1-219ENST00000488035 HYDINQ4G0P3 5121 aa-0.42□□□□□ -2.48
R3HDM1-219ENST00000488035 PZPP20742 1482 aa-0.42□□□□□ -2.48
R3HDM1-219ENST00000488035 MXRA5Q9NR99 2828 aa-0.42□□□□□ -2.48
R3HDM1-219ENST00000488035 TGP01266 2768 aa-0.43□□□□□ -2.48
R3HDM1-219ENST00000488035 XRN1Q8IZH2 1706 aaKnown RBP-0.43□□□□□ -2.48
R3HDM1-219ENST00000488035 CLIP1P30622 1438 aa-0.43□□□□□ -2.48
R3HDM1-219ENST00000488035 EFCAB10A6NFE3 127 aa-0.43□□□□□ -2.48
R3HDM1-219ENST00000488035 F8WEM9 126 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms