RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 HSD52Q0P140 79 aa13.35□□□□□ -0.27
TRIM8-204ENST00000487927 LINC00469Q8N7U9 141 aa13.35□□□□□ -0.27
TRIM8-204ENST00000487927 J3QQQ9 107 aa13.34□□□□□ -0.27
TRIM8-204ENST00000487927 LGALS3P17931 250 aaKnown RBP13.34□□□□□ -0.27
TRIM8-204ENST00000487927 TAL2Q16559 108 aa13.34□□□□□ -0.27
TRIM8-204ENST00000487927 LINC00242Q5T6M2 205 aa13.34□□□□□ -0.27
TRIM8-204ENST00000487927 IGHV1-58A0A0C4DH39 117 aa13.33□□□□□ -0.28
TRIM8-204ENST00000487927 ZNF815PA8K554 130 aa13.32□□□□□ -0.28
TRIM8-204ENST00000487927 TMEM262E9PQX1 116 aa13.32□□□□□ -0.28
TRIM8-204ENST00000487927 RBX1P62877 108 aa13.32□□□□□ -0.28
TRIM8-204ENST00000487927 Q6ZSA8 131 aa13.32□□□□□ -0.28
TRIM8-204ENST00000487927 KLK12Q9UKR0 248 aa13.32□□□□□ -0.28
TRIM8-204ENST00000487927 IGLV4-60A0A075B6I1 120 aa13.31□□□□□ -0.28
TRIM8-204ENST00000487927 FAM229AH3BQW9 127 aa13.31□□□□□ -0.28
TRIM8-204ENST00000487927 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.3□□□□□ -0.28
TRIM8-204ENST00000487927 TRAV13-1A0A0B4J241 112 aa13.3□□□□□ -0.28
TRIM8-204ENST00000487927 COX11Q9Y6N1 276 aa13.3□□□□□ -0.28
TRIM8-204ENST00000487927 SS18Q15532 418 aa13.29□□□□□ -0.28
TRIM8-204ENST00000487927 MPV17L2Q567V2 206 aa13.29□□□□□ -0.28
TRIM8-204ENST00000487927 COL5A1-AS1Q5SY13 56 aa13.29□□□□□ -0.28
TRIM8-204ENST00000487927 RMI2Q96E14 147 aa13.29□□□□□ -0.28
TRIM8-204ENST00000487927 CDKN2A-AS1Q9UH64 79 aa13.29□□□□□ -0.28
TRIM8-204ENST00000487927 IGKV2D-24A0A075B6R9 120 aa13.28□□□□□ -0.28
TRIM8-204ENST00000487927 HINT1P49773 126 aaPredicted RBP13.28□□□□□ -0.28
TRIM8-204ENST00000487927 LINC01561Q8N1V8 128 aa13.28□□□□□ -0.28
TRIM8-204ENST00000487927 UBE2WQ96B02 151 aa13.28□□□□□ -0.28
TRIM8-204ENST00000487927 TTTY13Q9BZ97 58 aa13.28□□□□□ -0.28
TRIM8-204ENST00000487927 TP73-AS1Q9UF72 201 aa13.28□□□□□ -0.28
TRIM8-204ENST00000487927 IGLV5-39A0A0G2JS06 123 aa13.27□□□□□ -0.29
TRIM8-204ENST00000487927 LINC01620Q4KN68 170 aa13.27□□□□□ -0.29
TRIM8-204ENST00000487927 BVES-AS1Q5T3Y7 98 aa13.27□□□□□ -0.29
TRIM8-204ENST00000487927 SCGB1D4Q6XE38 83 aa13.27□□□□□ -0.29
TRIM8-204ENST00000487927 LINC00959A0A1B0GUT2 108 aa13.26□□□□□ -0.29
TRIM8-204ENST00000487927 TSPEAR-AS2P59090 65 aa13.25□□□□□ -0.29
TRIM8-204ENST00000487927 COX6A2Q02221 97 aa13.25□□□□□ -0.29
TRIM8-204ENST00000487927 BATFQ16520 125 aa13.25□□□□□ -0.29
TRIM8-204ENST00000487927 SPANXB1Q9NS25 103 aaPredicted RBP13.25□□□□□ -0.29
TRIM8-204ENST00000487927 SPINK8P0C7L1 97 aa13.24□□□□□ -0.29
TRIM8-204ENST00000487927 ORAOV1Q8WV07 137 aa13.24□□□□□ -0.29
TRIM8-204ENST00000487927 A6NDN8 102 aa13.23□□□□□ -0.29
TRIM8-204ENST00000487927 SMIM1B2RUZ4 78 aa13.23□□□□□ -0.29
TRIM8-204ENST00000487927 ENHOQ6UWT2 76 aa13.23□□□□□ -0.29
TRIM8-204ENST00000487927 IGHV3OR16-9A0A0B4J2B5 98 aa13.22□□□□□ -0.29
TRIM8-204ENST00000487927 ANGP03950 147 aaKnown RBP13.22□□□□□ -0.29
TRIM8-204ENST00000487927 SFTA2Q6UW10 78 aa13.22□□□□□ -0.29
TRIM8-204ENST00000487927 A0A087WZ39 114 aa13.21□□□□□ -0.29
TRIM8-204ENST00000487927 NDUFA1O15239 70 aa13.21□□□□□ -0.29
TRIM8-204ENST00000487927 CEND1Q8N111 149 aa13.21□□□□□ -0.29
TRIM8-204ENST00000487927 HIST1H4GQ99525 98 aa13.21□□□□□ -0.29
TRIM8-204ENST00000487927 NDUFA12Q9UI09 145 aa13.21□□□□□ -0.29
TRIM8-204ENST00000487927 IGHV3-64A0A075B6Q5 118 aa13.2□□□□□ -0.3
TRIM8-204ENST00000487927 TMEM238C9JI98 176 aa13.2□□□□□ -0.3
TRIM8-204ENST00000487927 REG3AQ06141 175 aa13.2□□□□□ -0.3
TRIM8-204ENST00000487927 LINC00528Q8N1L1 170 aa13.2□□□□□ -0.3
TRIM8-204ENST00000487927 TIMM17BO60830 172 aa13.19□□□□□ -0.3
TRIM8-204ENST00000487927 HERV-K104P63124 156 aa13.19□□□□□ -0.3
TRIM8-204ENST00000487927 Q6ZVH6 145 aa13.19□□□□□ -0.3
TRIM8-204ENST00000487927 SCXQ7RTU7 201 aa13.19□□□□□ -0.3
TRIM8-204ENST00000487927 LINC00269Q8N2A0 174 aa13.19□□□□□ -0.3
TRIM8-204ENST00000487927 PRR34Q9NV39 138 aa13.19□□□□□ -0.3
TRIM8-204ENST00000487927 TRAV8-4A0A0B4J246 113 aa13.18□□□□□ -0.3
TRIM8-204ENST00000487927 IGKV3OR2-268A0A0C4DH90 116 aa13.18□□□□□ -0.3
TRIM8-204ENST00000487927 TMEM238LA0A1B0GVL6 79 aa13.18□□□□□ -0.3
TRIM8-204ENST00000487927 A6NJY4 79 aa13.18□□□□□ -0.3
TRIM8-204ENST00000487927 CD164L2Q6UWJ8 174 aa13.18□□□□□ -0.3
TRIM8-204ENST00000487927 C1orf43Q9BWL3 253 aa13.18□□□□□ -0.3
TRIM8-204ENST00000487927 CRPP02741 224 aa13.17□□□□□ -0.3
TRIM8-204ENST00000487927 A0A0J9YXY3 114 aa13.16□□□□□ -0.3
TRIM8-204ENST00000487927 PLA2G1BP04054 148 aaKnown RBP13.16□□□□□ -0.3
TRIM8-204ENST00000487927 SRSF9Q13242 221 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRIM8-204ENST00000487927 CIRBPQ14011 172 aaKnown RBP13.15□□□□□ -0.3
TRIM8-204ENST00000487927 PTTG1IPP53801 180 aa13.14□□□□□ -0.31
TRIM8-204ENST00000487927 COX7B2Q8TF08 81 aa13.14□□□□□ -0.31
TRIM8-204ENST00000487927 SPANXDQ9BXN6 97 aa13.14□□□□□ -0.31
TRIM8-204ENST00000487927 SPANXCQ9NY87 97 aa13.14□□□□□ -0.31
TRIM8-204ENST00000487927 MIAQ16674 131 aa13.13□□□□□ -0.31
TRIM8-204ENST00000487927 C14orf177Q52M58 125 aa13.13□□□□□ -0.31
TRIM8-204ENST00000487927 KRTAP26-1Q6PEX3 210 aa13.13□□□□□ -0.31
TRIM8-204ENST00000487927 CHCHD10Q8WYQ3 142 aaPredicted RBP13.13□□□□□ -0.31
TRIM8-204ENST00000487927 USP17L23D6RBM5 183 aa13.12□□□□□ -0.31
TRIM8-204ENST00000487927 COX7A2LO14548 114 aa13.12□□□□□ -0.31
TRIM8-204ENST00000487927 XCL1P47992 114 aa13.12□□□□□ -0.31
TRIM8-204ENST00000487927 KRTAP10-4P60372 401 aaPredicted RBP13.12□□□□□ -0.31
TRIM8-204ENST00000487927 CIRBP-AS1Q8TBR5 109 aa13.12□□□□□ -0.31
TRIM8-204ENST00000487927 COPS9Q8WXC6 57 aa13.12□□□□□ -0.31
TRIM8-204ENST00000487927 FXYD2P54710 66 aa13.11□□□□□ -0.31
TRIM8-204ENST00000487927 CLPSL2Q6UWE3 100 aa13.11□□□□□ -0.31
TRIM8-204ENST00000487927 Q8IZM0 81 aa13.11□□□□□ -0.31
TRIM8-204ENST00000487927 ZNF625Q96I27 306 aaPredicted RBP13.11□□□□□ -0.31
TRIM8-204ENST00000487927 APOMO95445 188 aa13.1□□□□□ -0.31
TRIM8-204ENST00000487927 IFITM1P13164 125 aa13.1□□□□□ -0.31
TRIM8-204ENST00000487927 CXCL5P42830 114 aa13.1□□□□□ -0.31
TRIM8-204ENST00000487927 C5orf38Q86SI9 138 aa13.1□□□□□ -0.31
TRIM8-204ENST00000487927 PPDPFQ9H3Y8 114 aa13.1□□□□□ -0.31
TRIM8-204ENST00000487927 SMIM13P0DJ93 91 aa13.09□□□□□ -0.31
TRIM8-204ENST00000487927 A0A1B0GWB2 263 aa13.08□□□□□ -0.32
TRIM8-204ENST00000487927 PRSS2P07478 247 aa13.08□□□□□ -0.32
TRIM8-204ENST00000487927 RPL24P83731 157 aaKnown RBP13.08□□□□□ -0.32
TRIM8-204ENST00000487927 LRP1Q07954 4544 aaKnown RBP13.07□□□□□ -0.32
TRIM8-204ENST00000487927 KRTAP29-1A8MX34 341 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms