RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 STAB2Q8WWQ8 2551 aa5.76□□□□□ -1.49
NUDCD3-209ENST00000487118 TMEM238C9JI98 176 aa5.75□□□□□ -1.49
NUDCD3-209ENST00000487118 APOMO95445 188 aa5.75□□□□□ -1.49
NUDCD3-209ENST00000487118 GCSHP23434 173 aa5.75□□□□□ -1.49
NUDCD3-209ENST00000487118 FXYD2P54710 66 aa5.75□□□□□ -1.49
NUDCD3-209ENST00000487118 KIAA0087Q14695 138 aa5.75□□□□□ -1.49
NUDCD3-209ENST00000487118 SPANXDQ9BXN6 97 aa5.75□□□□□ -1.49
NUDCD3-209ENST00000487118 SPANXCQ9NY87 97 aa5.75□□□□□ -1.49
NUDCD3-209ENST00000487118 TOMM7Q9P0U1 55 aa5.75□□□□□ -1.49
NUDCD3-209ENST00000487118 MALP21145 153 aa5.74□□□□□ -1.49
NUDCD3-209ENST00000487118 CXCL5P42830 114 aa5.74□□□□□ -1.49
NUDCD3-209ENST00000487118 SRSF9Q13242 221 aaKnown RBP eCLIP5.74□□□□□ -1.49
NUDCD3-209ENST00000487118 COL5A1-AS1Q5SY13 56 aa5.74□□□□□ -1.49
NUDCD3-209ENST00000487118 Q6ZVH6 145 aa5.74□□□□□ -1.49
NUDCD3-209ENST00000487118 C1orf43Q9BWL3 253 aa5.74□□□□□ -1.49
NUDCD3-209ENST00000487118 ALMS1Q8TCU4 4167 aa5.74□□□□□ -1.49
NUDCD3-209ENST00000487118 PRSS2P07478 247 aa5.73□□□□□ -1.49
NUDCD3-209ENST00000487118 CIRBPQ14011 172 aaKnown RBP5.73□□□□□ -1.49
NUDCD3-209ENST00000487118 C6orf226Q5I0X4 101 aa5.73□□□□□ -1.49
NUDCD3-209ENST00000487118 ADAMTSL4-AS1Q5T5F5 129 aa5.73□□□□□ -1.49
NUDCD3-209ENST00000487118 UBE2DNLQ8IWF7 75 aa5.73□□□□□ -1.49
NUDCD3-209ENST00000487118 IGKV2D-24A0A075B6R9 120 aa5.72□□□□□ -1.49
NUDCD3-209ENST00000487118 A0A1B0GWB2 263 aa5.72□□□□□ -1.49
NUDCD3-209ENST00000487118 A6NDN8 102 aa5.72□□□□□ -1.49
NUDCD3-209ENST00000487118 PTTG1IPP53801 180 aa5.72□□□□□ -1.49
NUDCD3-209ENST00000487118 SPAG11BQ08648 103 aa5.72□□□□□ -1.49
NUDCD3-209ENST00000487118 CFAP161Q6P656 301 aa5.72□□□□□ -1.49
NUDCD3-209ENST00000487118 RMI2Q96E14 147 aa5.72□□□□□ -1.49
NUDCD3-209ENST00000487118 PPDPFQ9H3Y8 114 aa5.72□□□□□ -1.49
NUDCD3-209ENST00000487118 TMEM238LA0A1B0GVL6 79 aa5.71□□□□□ -1.5
NUDCD3-209ENST00000487118 A6NJY4 79 aa5.71□□□□□ -1.5
NUDCD3-209ENST00000487118 IFITM1P13164 125 aa5.71□□□□□ -1.5
NUDCD3-209ENST00000487118 MEIG1Q5JSS6 88 aa5.71□□□□□ -1.5
NUDCD3-209ENST00000487118 MUSTN1Q8IVN3 82 aa5.71□□□□□ -1.5
NUDCD3-209ENST00000487118 C15orf56Q8N910 161 aa5.71□□□□□ -1.5
NUDCD3-209ENST00000487118 KRTAP1-5Q9BYS1 174 aa5.71□□□□□ -1.5
NUDCD3-209ENST00000487118 Q9HAA7 133 aa5.71□□□□□ -1.5
NUDCD3-209ENST00000487118 DNAH10Q8IVF4 4471 aa5.7□□□□□ -1.5
NUDCD3-209ENST00000487118 TAX1BP3O14907 124 aa5.7□□□□□ -1.5
NUDCD3-209ENST00000487118 SMIM13P0DJ93 91 aa5.7□□□□□ -1.5
NUDCD3-209ENST00000487118 CKS1BP61024 79 aa5.7□□□□□ -1.5
NUDCD3-209ENST00000487118 C2orf82Q6UX34 121 aa5.7□□□□□ -1.5
NUDCD3-209ENST00000487118 NTN5Q8WTR8 489 aaPredicted RBP5.7□□□□□ -1.5
NUDCD3-209ENST00000487118 ERG28Q9UKR5 140 aa5.7□□□□□ -1.5
NUDCD3-209ENST00000487118 HECTD4Q9Y4D8 3996 aa5.69□□□□□ -1.5
NUDCD3-209ENST00000487118 KMT2AQ03164 3969 aa5.69□□□□□ -1.5
NUDCD3-209ENST00000487118 GVQW2A0A096LPI5 108 aaPredicted RBP5.69□□□□□ -1.5
NUDCD3-209ENST00000487118 F8WDY8 70 aa5.69□□□□□ -1.5
NUDCD3-209ENST00000487118 RPL24P83731 157 aaKnown RBP5.69□□□□□ -1.5
NUDCD3-209ENST00000487118 TTC32Q5I0X7 151 aa5.69□□□□□ -1.5
NUDCD3-209ENST00000487118 SOSTDC1Q6X4U4 206 aa5.69□□□□□ -1.5
NUDCD3-209ENST00000487118 C6orf223Q8N319 242 aa5.69□□□□□ -1.5
NUDCD3-209ENST00000487118 LINC00308Q8TCZ7 52 aa5.69□□□□□ -1.5
NUDCD3-209ENST00000487118 C2orf48Q96LS8 159 aa5.69□□□□□ -1.5
NUDCD3-209ENST00000487118 NHP2Q9NX24 153 aaKnown RBP5.69□□□□□ -1.5
NUDCD3-209ENST00000487118 COX11Q9Y6N1 276 aa5.69□□□□□ -1.5
NUDCD3-209ENST00000487118 A0A0U1RRA0 63 aa5.68□□□□□ -1.5
NUDCD3-209ENST00000487118 NBDYA0A0U1RRE5 68 aa5.68□□□□□ -1.5
NUDCD3-209ENST00000487118 A4D1N5 150 aa5.68□□□□□ -1.5
NUDCD3-209ENST00000487118 EIF4EBP3O60516 100 aaPredicted RBP5.68□□□□□ -1.5
NUDCD3-209ENST00000487118 COX17Q14061 63 aa5.68□□□□□ -1.5
NUDCD3-209ENST00000487118 C10orf25Q5T742 122 aa5.68□□□□□ -1.5
NUDCD3-209ENST00000487118 MIR7-3HGQ8N6C7 128 aa5.68□□□□□ -1.5
NUDCD3-209ENST00000487118 DAND5Q8N907 189 aa5.68□□□□□ -1.5
NUDCD3-209ENST00000487118 COPS9Q8WXC6 57 aa5.68□□□□□ -1.5
NUDCD3-209ENST00000487118 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.67□□□□□ -1.5
NUDCD3-209ENST00000487118 A0A0B4J2C4 111 aa5.67□□□□□ -1.5
NUDCD3-209ENST00000487118 A0A1B0GV90 55 aa5.67□□□□□ -1.5
NUDCD3-209ENST00000487118 ZNF561-AS1K7EIQ3 104 aa5.67□□□□□ -1.5
NUDCD3-209ENST00000487118 K7ERJ3 54 aa5.67□□□□□ -1.5
NUDCD3-209ENST00000487118 CFC1BP0CG36 223 aa5.67□□□□□ -1.5
NUDCD3-209ENST00000487118 CFC1P0CG37 223 aa5.67□□□□□ -1.5
NUDCD3-209ENST00000487118 LINC00158P58513 81 aa5.67□□□□□ -1.5
NUDCD3-209ENST00000487118 HIGD2BQ4VC39 106 aa5.67□□□□□ -1.5
NUDCD3-209ENST00000487118 UNQ6190/PRO20217Q6UXQ8 127 aa5.67□□□□□ -1.5
NUDCD3-209ENST00000487118 LINC00526Q96FQ7 95 aa5.67□□□□□ -1.5
NUDCD3-209ENST00000487118 DNAH6Q9C0G6 4158 aa5.67□□□□□ -1.5
NUDCD3-209ENST00000487118 LOC107984156A0A0G2JMH3 177 aa5.66□□□□□ -1.5
NUDCD3-209ENST00000487118 TRBV30A0A0K0K1B3 111 aa5.66□□□□□ -1.5
NUDCD3-209ENST00000487118 C9orf118A6NHY6 69 aa5.66□□□□□ -1.5
NUDCD3-209ENST00000487118 PFN2P35080 140 aa5.66□□□□□ -1.5
NUDCD3-209ENST00000487118 NPC2P61916 151 aa5.66□□□□□ -1.5
NUDCD3-209ENST00000487118 ARL17AQ8IVW1 177 aa5.66□□□□□ -1.5
NUDCD3-209ENST00000487118 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
NUDCD3-209ENST00000487118 C6orf48Q9UBA6 75 aa5.66□□□□□ -1.5
NUDCD3-209ENST00000487118 USP17L23D6RBM5 183 aa5.65□□□□□ -1.5
NUDCD3-209ENST00000487118 Q6ZRU5 148 aa5.65□□□□□ -1.5
NUDCD3-209ENST00000487118 RAB37Q96AX2 223 aa5.65□□□□□ -1.5
NUDCD3-209ENST00000487118 CAMK2N2Q96S95 79 aa5.65□□□□□ -1.5
NUDCD3-209ENST00000487118 ABCA13Q86UQ4 5058 aa5.64□□□□□ -1.51
NUDCD3-209ENST00000487118 RNF151Q2KHN1 245 aa5.64□□□□□ -1.51
NUDCD3-209ENST00000487118 C9orf116Q5BN46 136 aaPredicted RBP5.64□□□□□ -1.51
NUDCD3-209ENST00000487118 PRO1854Q9UHT4 67 aa5.64□□□□□ -1.51
NUDCD3-209ENST00000487118 KIAA1109Q2LD37 5005 aa5.63□□□□□ -1.51
NUDCD3-209ENST00000487118 SYCNQ0VAF6 134 aa5.63□□□□□ -1.51
NUDCD3-209ENST00000487118 Q6ZR54 194 aa5.63□□□□□ -1.51
NUDCD3-209ENST00000487118 Q6ZRN7 208 aaPredicted RBP5.63□□□□□ -1.51
NUDCD3-209ENST00000487118 SND1-IT1Q9HBX3 110 aa5.63□□□□□ -1.51
NUDCD3-209ENST00000487118 H3BUT2 72 aa5.62□□□□□ -1.51
NUDCD3-209ENST00000487118 TSPAN13O95857 204 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms