RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 TOMM7Q9P0U1 55 aa4.66□□□□□ -1.66
UBR4-214ENST00000486515 KMT2AQ03164 3969 aa4.65□□□□□ -1.66
UBR4-214ENST00000486515 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.65□□□□□ -1.67
UBR4-214ENST00000486515 LGALS3P17931 250 aaKnown RBP4.65□□□□□ -1.67
UBR4-214ENST00000486515 FOXI1Q12951 378 aa4.65□□□□□ -1.67
UBR4-214ENST00000486515 SFTA2Q6UW10 78 aa4.65□□□□□ -1.67
UBR4-214ENST00000486515 PLEKHB2Q96CS7 222 aa4.65□□□□□ -1.67
UBR4-214ENST00000486515 VAMP8Q9BV40 100 aa4.65□□□□□ -1.67
UBR4-214ENST00000486515 CDKN2A-AS1Q9UH64 79 aa4.65□□□□□ -1.67
UBR4-214ENST00000486515 DNAH11Q96DT5 4516 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 IGLV4-69A0A075B6H9 119 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 IGHV3-64A0A075B6Q5 118 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 IGHV3OR16-9A0A0B4J2B5 98 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 hDV102S1A0JD36 115 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 TSPAN13O95857 204 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 SPINK8P0C7L1 97 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 ZNF22P17026 224 aaPredicted RBP4.64□□□□□ -1.67
UBR4-214ENST00000486515 CXCL5P42830 114 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 COX6A2Q02221 97 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 SPAG11BQ08648 103 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 Q6ZR54 194 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 ATOH7Q8N100 152 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 FAM104AQ969W3 186 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 PKIGQ9Y2B9 76 aa4.64□□□□□ -1.67
UBR4-214ENST00000486515 IGLV5-45A0A087WSX0 123 aa4.63□□□□□ -1.67
UBR4-214ENST00000486515 USP17L23D6RBM5 183 aa4.63□□□□□ -1.67
UBR4-214ENST00000486515 NMUP48645 174 aa4.63□□□□□ -1.67
UBR4-214ENST00000486515 LINC00336Q6ZUF6 198 aa4.63□□□□□ -1.67
UBR4-214ENST00000486515 MAPKAPK5-AS1Q8N8E1 139 aa4.63□□□□□ -1.67
UBR4-214ENST00000486515 COX7B2Q8TF08 81 aa4.63□□□□□ -1.67
UBR4-214ENST00000486515 CAMK2N2Q96S95 79 aa4.63□□□□□ -1.67
UBR4-214ENST00000486515 KRTAP1-5Q9BYS1 174 aa4.63□□□□□ -1.67
UBR4-214ENST00000486515 PRO1933Q9H354 126 aa4.63□□□□□ -1.67
UBR4-214ENST00000486515 MYMXA0A1B0GTQ4 84 aa4.62□□□□□ -1.67
UBR4-214ENST00000486515 TMEM223A0PJW6 202 aa4.62□□□□□ -1.67
UBR4-214ENST00000486515 SMIM1B2RUZ4 78 aa4.62□□□□□ -1.67
UBR4-214ENST00000486515 LECT2O14960 151 aa4.62□□□□□ -1.67
UBR4-214ENST00000486515 NDUFA1O15239 70 aa4.62□□□□□ -1.67
UBR4-214ENST00000486515 LEPROTO15243 131 aa4.62□□□□□ -1.67
UBR4-214ENST00000486515 GCSHP23434 173 aa4.62□□□□□ -1.67
UBR4-214ENST00000486515 CIRBPQ14011 172 aaKnown RBP4.62□□□□□ -1.67
UBR4-214ENST00000486515 VAMP3Q15836 100 aa4.62□□□□□ -1.67
UBR4-214ENST00000486515 RNF151Q2KHN1 245 aa4.62□□□□□ -1.67
UBR4-214ENST00000486515 HIGD2BQ4VC39 106 aa4.62□□□□□ -1.67
UBR4-214ENST00000486515 C5orf47Q569G3 176 aa4.62□□□□□ -1.67
UBR4-214ENST00000486515 Q8IZM0 81 aa4.62□□□□□ -1.67
UBR4-214ENST00000486515 MIEN1Q9BRT3 115 aa4.62□□□□□ -1.67
UBR4-214ENST00000486515 E9PLD3 99 aa4.61□□□□□ -1.67
UBR4-214ENST00000486515 J3QQQ9 107 aa4.61□□□□□ -1.67
UBR4-214ENST00000486515 HERV-K104P63124 156 aa4.61□□□□□ -1.67
UBR4-214ENST00000486515 SCGB1D4Q6XE38 83 aa4.61□□□□□ -1.67
UBR4-214ENST00000486515 STPG4Q8N801 248 aa4.61□□□□□ -1.67
UBR4-214ENST00000486515 C2orf48Q96LS8 159 aa4.61□□□□□ -1.67
UBR4-214ENST00000486515 PAM16Q9Y3D7 125 aa4.61□□□□□ -1.67
UBR4-214ENST00000486515 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.6□□□□□ -1.67
UBR4-214ENST00000486515 GVQW2A0A096LPI5 108 aaPredicted RBP4.6□□□□□ -1.67
UBR4-214ENST00000486515 SYCNQ0VAF6 134 aa4.6□□□□□ -1.67
UBR4-214ENST00000486515 SPATA45Q537H7 98 aa4.6□□□□□ -1.67
UBR4-214ENST00000486515 MEIG1Q5JSS6 88 aa4.6□□□□□ -1.67
UBR4-214ENST00000486515 CARD19Q96LW7 228 aa4.6□□□□□ -1.67
UBR4-214ENST00000486515 NDUFA12Q9UI09 145 aa4.6□□□□□ -1.67
UBR4-214ENST00000486515 HMCN2Q8NDA2 5059 aa4.6□□□□□ -1.67
UBR4-214ENST00000486515 A0A087WTM6 91 aa4.59□□□□□ -1.67
UBR4-214ENST00000486515 IGLV5-52A0A0A0MRZ9 124 aa4.59□□□□□ -1.67
UBR4-214ENST00000486515 ZNF815PA8K554 130 aa4.59□□□□□ -1.67
UBR4-214ENST00000486515 LCE2BO14633 110 aa4.59□□□□□ -1.67
UBR4-214ENST00000486515 CDPF1Q6NVV7 123 aa4.59□□□□□ -1.67
UBR4-214ENST00000486515 KRTAP26-1Q6PEX3 210 aa4.59□□□□□ -1.67
UBR4-214ENST00000486515 Q8N814 137 aa4.59□□□□□ -1.67
UBR4-214ENST00000486515 NTN5Q8WTR8 489 aaPredicted RBP4.59□□□□□ -1.67
UBR4-214ENST00000486515 DPH3Q96FX2 82 aa4.59□□□□□ -1.67
UBR4-214ENST00000486515 RNF213Q63HN8 5207 aa4.59□□□□□ -1.68
UBR4-214ENST00000486515 IGLV5-39A0A0G2JS06 123 aa4.58□□□□□ -1.68
UBR4-214ENST00000486515 TRBV30A0A0K0K1B3 111 aa4.58□□□□□ -1.68
UBR4-214ENST00000486515 LINC00158P58513 81 aa4.58□□□□□ -1.68
UBR4-214ENST00000486515 Q6ZRN7 208 aaPredicted RBP4.58□□□□□ -1.68
UBR4-214ENST00000486515 C15orf56Q8N910 161 aa4.58□□□□□ -1.68
UBR4-214ENST00000486515 COPS9Q8WXC6 57 aa4.58□□□□□ -1.68
UBR4-214ENST00000486515 A0A1B0GVY2 172 aa4.57□□□□□ -1.68
UBR4-214ENST00000486515 RTL8CO15255 209 aa4.57□□□□□ -1.68
UBR4-214ENST00000486515 PFN2P35080 140 aa4.57□□□□□ -1.68
UBR4-214ENST00000486515 RPL18AQ02543 176 aaKnown RBP4.57□□□□□ -1.68
UBR4-214ENST00000486515 TNP2Q05952 138 aa4.57□□□□□ -1.68
UBR4-214ENST00000486515 COX17Q14061 63 aa4.57□□□□□ -1.68
UBR4-214ENST00000486515 SLC25A34Q6PIV7 304 aa4.57□□□□□ -1.68
UBR4-214ENST00000486515 C2orf82Q6UX34 121 aa4.57□□□□□ -1.68
UBR4-214ENST00000486515 Q8N1X5 172 aa4.57□□□□□ -1.68
UBR4-214ENST00000486515 LINC00526Q96FQ7 95 aa4.57□□□□□ -1.68
UBR4-214ENST00000486515 ZNF625Q96I27 306 aaPredicted RBP4.57□□□□□ -1.68
UBR4-214ENST00000486515 SIGMAR1Q99720 223 aa4.57□□□□□ -1.68
UBR4-214ENST00000486515 FAT2Q9NYQ8 4349 aa4.57□□□□□ -1.68
UBR4-214ENST00000486515 VPS13DQ5THJ4 4388 aa4.56□□□□□ -1.68
UBR4-214ENST00000486515 LRCOL1A6NCL2 159 aa4.56□□□□□ -1.68
UBR4-214ENST00000486515 CNBPP62633 177 aaKnown RBP4.56□□□□□ -1.68
UBR4-214ENST00000486515 SRSF9Q13242 221 aaKnown RBP eCLIP4.56□□□□□ -1.68
UBR4-214ENST00000486515 UNQ6190/PRO20217Q6UXQ8 127 aa4.56□□□□□ -1.68
UBR4-214ENST00000486515 Q6ZRU5 148 aa4.56□□□□□ -1.68
UBR4-214ENST00000486515 LINC00474Q9P2X8 69 aa4.56□□□□□ -1.68
UBR4-214ENST00000486515 MYCBP2O75592 4640 aa4.55□□□□□ -1.68
UBR4-214ENST00000486515 LOC107984640A0A0U1RRK4 108 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms