RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 FHL2Q14192 279 aa7.6□□□□□ -1.19
SRGAP3-207ENST00000485983 ALPK3Q96L96 1907 aa7.6□□□□□ -1.19
SRGAP3-207ENST00000485983 BRCA2P51587 3418 aa7.59□□□□□ -1.19
SRGAP3-207ENST00000485983 C9orf116Q5BN46 136 aaPredicted RBP7.59□□□□□ -1.19
SRGAP3-207ENST00000485983 IMUPQ9GZP8 106 aa7.59□□□□□ -1.19
SRGAP3-207ENST00000485983 NUP210LQ5VU65 1888 aa7.59□□□□□ -1.19
SRGAP3-207ENST00000485983 CRIP2P52943 208 aaPredicted RBP7.58□□□□□ -1.2
SRGAP3-207ENST00000485983 LINC00208Q96KT6 92 aa7.58□□□□□ -1.2
SRGAP3-207ENST00000485983 PCNX3Q9H6A9 2034 aa7.58□□□□□ -1.2
SRGAP3-207ENST00000485983 RETNLBQ9BQ08 111 aa7.58□□□□□ -1.2
SRGAP3-207ENST00000485983 CELA1Q9UNI1 258 aa7.58□□□□□ -1.2
SRGAP3-207ENST00000485983 ABCA12Q86UK0 2595 aa7.58□□□□□ -1.2
SRGAP3-207ENST00000485983 TRBV7-6A0A0J9YX20 115 aa7.57□□□□□ -1.2
SRGAP3-207ENST00000485983 CEP192Q8TEP8 1941 aa7.57□□□□□ -1.2
SRGAP3-207ENST00000485983 C5orf42Q9H799 3197 aa7.57□□□□□ -1.2
SRGAP3-207ENST00000485983 EDN2P20800 178 aa7.57□□□□□ -1.2
SRGAP3-207ENST00000485983 IGLV4-60A0A075B6I1 120 aa7.57□□□□□ -1.2
SRGAP3-207ENST00000485983 LYPD5Q6UWN5 251 aa7.57□□□□□ -1.2
SRGAP3-207ENST00000485983 KIAA1549Q9HCM3 1950 aa7.57□□□□□ -1.2
SRGAP3-207ENST00000485983 SPTBN4Q9H254 2564 aa7.56□□□□□ -1.2
SRGAP3-207ENST00000485983 SMIM1B2RUZ4 78 aa7.56□□□□□ -1.2
SRGAP3-207ENST00000485983 ZNF580Q9UK33 172 aa7.56□□□□□ -1.2
SRGAP3-207ENST00000485983 Q8N814 137 aa7.56□□□□□ -1.2
SRGAP3-207ENST00000485983 IGIPA6NJ69 53 aa7.56□□□□□ -1.2
SRGAP3-207ENST00000485983 TANC2Q9HCD6 1990 aa7.56□□□□□ -1.2
SRGAP3-207ENST00000485983 A0A0U1RQV1 116 aa7.55□□□□□ -1.2
SRGAP3-207ENST00000485983 FHL3Q13643 280 aa7.55□□□□□ -1.2
SRGAP3-207ENST00000485983 CNFNQ9BYD5 112 aa7.55□□□□□ -1.2
SRGAP3-207ENST00000485983 Q8N2B8 174 aa7.55□□□□□ -1.2
SRGAP3-207ENST00000485983 SPINK1P00995 79 aa7.55□□□□□ -1.2
SRGAP3-207ENST00000485983 LINC01547P58512 204 aaPredicted RBP7.55□□□□□ -1.2
SRGAP3-207ENST00000485983 RANBP2P49792 3224 aaKnown RBP7.54□□□□□ -1.2
SRGAP3-207ENST00000485983 TLN1Q9Y490 2541 aaKnown RBP7.54□□□□□ -1.2
SRGAP3-207ENST00000485983 CSDC2Q9Y534 153 aaKnown RBP7.54□□□□□ -1.2
SRGAP3-207ENST00000485983 A0A087WSZ3 146 aa7.54□□□□□ -1.2
SRGAP3-207ENST00000485983 MUC4Q99102 2169 aa7.54□□□□□ -1.2
SRGAP3-207ENST00000485983 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
SRGAP3-207ENST00000485983 FAM229AH3BQW9 127 aa7.54□□□□□ -1.2
SRGAP3-207ENST00000485983 LAMA3Q16787 3333 aa7.53□□□□□ -1.2
SRGAP3-207ENST00000485983 GAS8-AS1O95177 125 aa7.52□□□□□ -1.2
SRGAP3-207ENST00000485983 MDFIQ99750 246 aa7.52□□□□□ -1.2
SRGAP3-207ENST00000485983 LINC00694P0DN24 101 aa7.52□□□□□ -1.21
SRGAP3-207ENST00000485983 PRR3P79522 188 aaKnown RBP7.52□□□□□ -1.21
SRGAP3-207ENST00000485983 BEAN1Q3B7T3 259 aa7.51□□□□□ -1.21
SRGAP3-207ENST00000485983 COX7CP15954 63 aa7.51□□□□□ -1.21
SRGAP3-207ENST00000485983 PCOTHQ58A44 107 aa7.5□□□□□ -1.21
SRGAP3-207ENST00000485983 Q6Q795 121 aa7.5□□□□□ -1.21
SRGAP3-207ENST00000485983 ANKRD11Q6UB99 2663 aaPredicted RBP7.5□□□□□ -1.21
SRGAP3-207ENST00000485983 ARHGAP32A7KAX9 2087 aa7.5□□□□□ -1.21
SRGAP3-207ENST00000485983 TRAV7A0A075B6U4 112 aa7.5□□□□□ -1.21
SRGAP3-207ENST00000485983 A0A1W2PPR1 153 aa7.5□□□□□ -1.21
SRGAP3-207ENST00000485983 LINC01561Q8N1V8 128 aa7.49□□□□□ -1.21
SRGAP3-207ENST00000485983 LINC00575Q6W349 94 aa7.49□□□□□ -1.21
SRGAP3-207ENST00000485983 Q6ZRU5 148 aa7.49□□□□□ -1.21
SRGAP3-207ENST00000485983 PRLHP81277 87 aa7.48□□□□□ -1.21
SRGAP3-207ENST00000485983 FN1P02751 2386 aaKnown RBP7.48□□□□□ -1.21
SRGAP3-207ENST00000485983 POLQO75417 2590 aa7.48□□□□□ -1.21
SRGAP3-207ENST00000485983 SBSPONQ8IVN8 264 aa7.48□□□□□ -1.21
SRGAP3-207ENST00000485983 SMCR5Q8TEV8 140 aa7.48□□□□□ -1.21
SRGAP3-207ENST00000485983 MUC22E2RYF6 1773 aaPredicted RBP7.47□□□□□ -1.21
SRGAP3-207ENST00000485983 C22orf24Q9Y442 160 aa7.47□□□□□ -1.21
SRGAP3-207ENST00000485983 HTTP42858 3142 aa7.47□□□□□ -1.21
SRGAP3-207ENST00000485983 C2orf91Q6ZV80 131 aa7.47□□□□□ -1.21
SRGAP3-207ENST00000485983 H0Y9P7 68 aa7.47□□□□□ -1.21
SRGAP3-207ENST00000485983 XGP55808 180 aa7.46□□□□□ -1.21
SRGAP3-207ENST00000485983 SPACA4Q8TDM5 124 aa7.46□□□□□ -1.22
SRGAP3-207ENST00000485983 AMELXQ99217 191 aa7.46□□□□□ -1.22
SRGAP3-207ENST00000485983 HCG22E2RYF7 251 aa7.46□□□□□ -1.22
SRGAP3-207ENST00000485983 TLN2Q9Y4G6 2542 aa7.46□□□□□ -1.22
SRGAP3-207ENST00000485983 IGKV2D-30A0A075B6S6 120 aa7.46□□□□□ -1.22
SRGAP3-207ENST00000485983 A0A087WYN8 130 aa7.46□□□□□ -1.22
SRGAP3-207ENST00000485983 IGKV2-30P06310 120 aa7.46□□□□□ -1.22
SRGAP3-207ENST00000485983 SMIM26A0A096LP01 95 aa7.45□□□□□ -1.22
SRGAP3-207ENST00000485983 hDV103S1A0JD37 113 aa7.45□□□□□ -1.22
SRGAP3-207ENST00000485983 DEFB116Q30KQ4 102 aa7.45□□□□□ -1.22
SRGAP3-207ENST00000485983 TRBV7-7A0A0K0K1E9 115 aa7.45□□□□□ -1.22
SRGAP3-207ENST00000485983 VPREB1P12018 145 aa7.44□□□□□ -1.22
SRGAP3-207ENST00000485983 Q8N3U1 123 aa7.44□□□□□ -1.22
SRGAP3-207ENST00000485983 HCFC1P51610 2035 aa7.44□□□□□ -1.22
SRGAP3-207ENST00000485983 C16orf90A8MZG2 172 aa7.43□□□□□ -1.22
SRGAP3-207ENST00000485983 Q6ZSN1 163 aa7.43□□□□□ -1.22
SRGAP3-207ENST00000485983 EXPH5Q8NEV8 1989 aa7.43□□□□□ -1.22
SRGAP3-207ENST00000485983 F8P00451 2351 aa7.42□□□□□ -1.22
SRGAP3-207ENST00000485983 J3QL48 77 aa7.42□□□□□ -1.22
SRGAP3-207ENST00000485983 CHD7Q9P2D1 2997 aa7.42□□□□□ -1.22
SRGAP3-207ENST00000485983 A0A0C4DFX4 3053 aa7.42□□□□□ -1.22
SRGAP3-207ENST00000485983 YPEL4Q96NS1 127 aa7.41□□□□□ -1.22
SRGAP3-207ENST00000485983 ADAMTSL4-AS1Q5T5F5 129 aa7.41□□□□□ -1.22
SRGAP3-207ENST00000485983 CRYGAP11844 174 aa7.4□□□□□ -1.22
SRGAP3-207ENST00000485983 MTORP42345 2549 aa7.4□□□□□ -1.22
SRGAP3-207ENST00000485983 MOBPQ13875 183 aa7.4□□□□□ -1.22
SRGAP3-207ENST00000485983 KIF25-AS1Q9Y6Z4 181 aa7.4□□□□□ -1.22
SRGAP3-207ENST00000485983 USP9XQ93008 2570 aaPredicted RBP7.4□□□□□ -1.22
SRGAP3-207ENST00000485983 FLNBO75369 2602 aaKnown RBP7.4□□□□□ -1.23
SRGAP3-207ENST00000485983 C7orf65Q6ZTY9 151 aa7.4□□□□□ -1.23
SRGAP3-207ENST00000485983 COX8CQ7Z4L0 72 aa7.4□□□□□ -1.23
SRGAP3-207ENST00000485983 TSPEAR-AS2P59090 65 aa7.39□□□□□ -1.23
SRGAP3-207ENST00000485983 WWC2-AS2Q96NR7 200 aa7.39□□□□□ -1.23
SRGAP3-207ENST00000485983 LAMA2P24043 3122 aaKnown RBP7.39□□□□□ -1.23
SRGAP3-207ENST00000485983 A0A087WVE0 104 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms