RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 WHAMMP3Q1A5X7 153 aa-1.34□□□□□ -2.62
SFPQ-209ENST00000485454 COPS9Q8WXC6 57 aa-1.34□□□□□ -2.62
SFPQ-209ENST00000485454 TCEAL4Q96EI5 215 aa-1.34□□□□□ -2.62
SFPQ-209ENST00000485454 AIF1LQ9BQI0 150 aa-1.34□□□□□ -2.62
SFPQ-209ENST00000485454 SMIM3Q9BZL3 60 aa-1.34□□□□□ -2.62
SFPQ-209ENST00000485454 FAIMQ9NVQ4 179 aa-1.34□□□□□ -2.62
SFPQ-209ENST00000485454 BTAF1O14981 1849 aa-1.34□□□□□ -2.62
SFPQ-209ENST00000485454 TRIOO75962 3097 aa-1.34□□□□□ -2.62
SFPQ-209ENST00000485454 A0A0G2JMZ2 1700 aa-1.35□□□□□ -2.62
SFPQ-209ENST00000485454 PTPN23Q9H3S7 1636 aa-1.35□□□□□ -2.63
SFPQ-209ENST00000485454 GNG14A0A1W2PPG7 69 aa-1.35□□□□□ -2.63
SFPQ-209ENST00000485454 H0YGG7 62 aa-1.35□□□□□ -2.63
SFPQ-209ENST00000485454 HMGN4O00479 90 aa-1.35□□□□□ -2.63
SFPQ-209ENST00000485454 SCGB1A1P11684 91 aa-1.35□□□□□ -2.63
SFPQ-209ENST00000485454 SPRR4Q96PI1 79 aa-1.35□□□□□ -2.63
SFPQ-209ENST00000485454 TMEM191AQ9H0A3 160 aa-1.35□□□□□ -2.63
SFPQ-209ENST00000485454 FHAD1B1AJZ9 1412 aa-1.36□□□□□ -2.63
SFPQ-209ENST00000485454 ADAMTS12P58397 1594 aa-1.36□□□□□ -2.63
SFPQ-209ENST00000485454 ATMQ13315 3056 aa-1.36□□□□□ -2.63
SFPQ-209ENST00000485454 CCDC167Q9P0B6 97 aa-1.36□□□□□ -2.63
SFPQ-209ENST00000485454 PSME4Q14997 1843 aa-1.36□□□□□ -2.63
SFPQ-209ENST00000485454 MYOM1P52179 1685 aa-1.36□□□□□ -2.63
SFPQ-209ENST00000485454 COL4A6Q14031 1691 aa-1.36□□□□□ -2.63
SFPQ-209ENST00000485454 QRICH2Q9H0J4 1663 aa-1.36□□□□□ -2.63
SFPQ-209ENST00000485454 MGAQ8IWI9 3026 aa-1.37□□□□□ -2.63
SFPQ-209ENST00000485454 HIST1H1DP16402 221 aaKnown RBP-1.37□□□□□ -2.63
SFPQ-209ENST00000485454 UBA52P62987 128 aaKnown RBP-1.37□□□□□ -2.63
SFPQ-209ENST00000485454 SMCO1Q147U7 214 aa-1.37□□□□□ -2.63
SFPQ-209ENST00000485454 H1FX-AS1Q4G0G2 97 aa-1.37□□□□□ -2.63
SFPQ-209ENST00000485454 MRPL54Q6P161 138 aaKnown RBP-1.37□□□□□ -2.63
SFPQ-209ENST00000485454 FDCSPQ8NFU4 85 aa-1.37□□□□□ -2.63
SFPQ-209ENST00000485454 FAM167A-AS1Q96KT0 104 aa-1.37□□□□□ -2.63
SFPQ-209ENST00000485454 PRO1933Q9H354 126 aa-1.37□□□□□ -2.63
SFPQ-209ENST00000485454 TCHHQ07283 1943 aa-1.37□□□□□ -2.63
SFPQ-209ENST00000485454 RELNP78509 3460 aa-1.37□□□□□ -2.63
SFPQ-209ENST00000485454 ADGRG4Q8IZF6 3080 aa-1.37□□□□□ -2.63
SFPQ-209ENST00000485454 SPENQ96T58 3664 aaKnown RBP-1.37□□□□□ -2.63
SFPQ-209ENST00000485454 PRUNE2Q8WUY3 3088 aa-1.38□□□□□ -2.63
SFPQ-209ENST00000485454 SMG1Q96Q15 3661 aaKnown RBP-1.38□□□□□ -2.63
SFPQ-209ENST00000485454 SLIT1O75093 1534 aa-1.38□□□□□ -2.63
SFPQ-209ENST00000485454 COPZ1P61923 177 aa-1.38□□□□□ -2.63
SFPQ-209ENST00000485454 LINC01600Q96MT4 127 aa-1.38□□□□□ -2.63
SFPQ-209ENST00000485454 NXT2Q9NPJ8 142 aaKnown RBP-1.38□□□□□ -2.63
SFPQ-209ENST00000485454 TRANK1O15050 2925 aa-1.38□□□□□ -2.63
SFPQ-209ENST00000485454 DNAH5Q8TE73 4624 aa-1.38□□□□□ -2.63
SFPQ-209ENST00000485454 APOBP04114 4563 aaKnown RBP-1.39□□□□□ -2.63
SFPQ-209ENST00000485454 IGLC1P0CG04 106 aa-1.39□□□□□ -2.63
SFPQ-209ENST00000485454 CKS1BP61024 79 aa-1.39□□□□□ -2.63
SFPQ-209ENST00000485454 BTG2P78543 158 aa-1.39□□□□□ -2.63
SFPQ-209ENST00000485454 SELENOSQ9BQE4 189 aa-1.39□□□□□ -2.63
SFPQ-209ENST00000485454 CFTRP13569 1480 aa-1.39□□□□□ -2.63
SFPQ-209ENST00000485454 MT1HP80294 61 aa-1.4□□□□□ -2.63
SFPQ-209ENST00000485454 DPH3Q96FX2 82 aa-1.4□□□□□ -2.63
SFPQ-209ENST00000485454 CRIPTQ9P021 101 aa-1.4□□□□□ -2.63
SFPQ-209ENST00000485454 NKTRP30414 1462 aaKnown RBP-1.4□□□□□ -2.63
SFPQ-209ENST00000485454 I3L3M4 83 aa-1.41□□□□□ -2.64
SFPQ-209ENST00000485454 UBE2D3P61077 147 aa-1.41□□□□□ -2.64
SFPQ-209ENST00000485454 UBE2D2P62837 147 aa-1.41□□□□□ -2.64
SFPQ-209ENST00000485454 RPS25P62851 125 aaKnown RBP-1.41□□□□□ -2.64
SFPQ-209ENST00000485454 MT1MQ8N339 61 aa-1.41□□□□□ -2.64
SFPQ-209ENST00000485454 TPT1P8Q9HAU6 139 aa-1.41□□□□□ -2.64
SFPQ-209ENST00000485454 CMYA5Q8N3K9 4069 aa-1.41□□□□□ -2.64
SFPQ-209ENST00000485454 XRN1Q8IZH2 1706 aaKnown RBP-1.41□□□□□ -2.64
SFPQ-209ENST00000485454 TROQ12816 1431 aaPredicted RBP-1.41□□□□□ -2.64
SFPQ-209ENST00000485454 SMG6Q86US8 1419 aaKnown RBP-1.41□□□□□ -2.64
SFPQ-209ENST00000485454 C1orf167Q5SNV9 1468 aa-1.42□□□□□ -2.64
SFPQ-209ENST00000485454 MT1XP80297 61 aa-1.42□□□□□ -2.64
SFPQ-209ENST00000485454 KRTAP8-1Q8IUC2 63 aa-1.42□□□□□ -2.64
SFPQ-209ENST00000485454 PPP3R2Q96LZ3 170 aa-1.42□□□□□ -2.64
SFPQ-209ENST00000485454 PDCD10Q9BUL8 212 aa-1.42□□□□□ -2.64
SFPQ-209ENST00000485454 SPANXDQ9BXN6 97 aa-1.42□□□□□ -2.64
SFPQ-209ENST00000485454 RERGLQ9H628 205 aa-1.42□□□□□ -2.64
SFPQ-209ENST00000485454 UQCR10Q9UDW1 63 aa-1.42□□□□□ -2.64
SFPQ-209ENST00000485454 SERP1Q9Y6X1 66 aa-1.42□□□□□ -2.64
SFPQ-209ENST00000485454 MYH7P12883 1935 aa-1.42□□□□□ -2.64
SFPQ-209ENST00000485454 LOC400499M0QZD8 3231 aa-1.43□□□□□ -2.64
SFPQ-209ENST00000485454 MT2AP02795 61 aa-1.43□□□□□ -2.64
SFPQ-209ENST00000485454 TSTD1Q8NFU3 115 aa-1.43□□□□□ -2.64
SFPQ-209ENST00000485454 MYOZ3Q8TDC0 251 aa-1.43□□□□□ -2.64
SFPQ-209ENST00000485454 TSLPQ969D9 159 aa-1.43□□□□□ -2.64
SFPQ-209ENST00000485454 COPZ2Q9P299 210 aa-1.43□□□□□ -2.64
SFPQ-209ENST00000485454 TET3O43151 1660 aa-1.43□□□□□ -2.64
SFPQ-209ENST00000485454 GRIN2AQ12879 1464 aa-1.43□□□□□ -2.64
SFPQ-209ENST00000485454 CHKB-CPT1BH3BT56 60 aa-1.44□□□□□ -2.64
SFPQ-209ENST00000485454 CCL22O00626 93 aa-1.44□□□□□ -2.64
SFPQ-209ENST00000485454 SEC11AP67812 179 aa-1.44□□□□□ -2.64
SFPQ-209ENST00000485454 AKAP14Q86UN6 197 aa-1.44□□□□□ -2.64
SFPQ-209ENST00000485454 FAM223AQ8IWN6 122 aa-1.44□□□□□ -2.64
SFPQ-209ENST00000485454 LZICQ8WZA0 190 aa-1.44□□□□□ -2.64
SFPQ-209ENST00000485454 ARL11Q969Q4 196 aa-1.44□□□□□ -2.64
SFPQ-209ENST00000485454 CDC42SE2Q9NRR3 84 aa-1.44□□□□□ -2.64
SFPQ-209ENST00000485454 CPSF1Q10570 1443 aaKnown RBP-1.44□□□□□ -2.64
SFPQ-209ENST00000485454 ARHGEF5Q12774 1597 aa-1.44□□□□□ -2.64
SFPQ-209ENST00000485454 TRRAPQ9Y4A5 3859 aa-1.44□□□□□ -2.64
SFPQ-209ENST00000485454 FREM2Q5SZK8 3169 aa-1.45□□□□□ -2.64
SFPQ-209ENST00000485454 H3BNG1 76 aa-1.45□□□□□ -2.64
SFPQ-209ENST00000485454 COMMD6Q7Z4G1 85 aa-1.45□□□□□ -2.64
SFPQ-209ENST00000485454 C8orf59Q8N0T1 100 aaPredicted RBP-1.45□□□□□ -2.64
SFPQ-209ENST00000485454 PYDC1Q8WXC3 89 aa-1.45□□□□□ -2.64
SFPQ-209ENST00000485454 LSM10Q969L4 123 aaKnown RBP-1.45□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms