RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 UBE2AP49459 152 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 RBM3P98179 157 aaKnown RBP3.54□□□□□ -1.84
CCDC39-205ENST00000485055 ADIRFQ15847 76 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 C16orf74Q96GX8 76 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 RMI2Q96E14 147 aa3.53□□□□□ -1.84
CCDC39-205ENST00000485055 MGST2Q99735 147 aa3.53□□□□□ -1.84
CCDC39-205ENST00000485055 TMEM242Q9NWH2 141 aa3.53□□□□□ -1.84
CCDC39-205ENST00000485055 DNAH2Q9P225 4427 aa3.53□□□□□ -1.84
CCDC39-205ENST00000485055 INSP01308 110 aa3.53□□□□□ -1.84
CCDC39-205ENST00000485055 LGALSLQ3ZCW2 172 aaPredicted RBP3.53□□□□□ -1.84
CCDC39-205ENST00000485055 Q6ZQT7 251 aa3.53□□□□□ -1.84
CCDC39-205ENST00000485055 TIMM9Q9Y5J7 89 aa3.53□□□□□ -1.84
CCDC39-205ENST00000485055 DYNC1H1Q14204 4646 aaKnown RBP3.53□□□□□ -1.84
CCDC39-205ENST00000485055 AGRNO00468 2067 aa3.53□□□□□ -1.84
CCDC39-205ENST00000485055 GDF5OSQ5U4N7 250 aa3.53□□□□□ -1.85
CCDC39-205ENST00000485055 SH2D6Q7Z4S9 175 aa3.53□□□□□ -1.85
CCDC39-205ENST00000485055 OR10AG1Q8NH19 301 aa3.53□□□□□ -1.85
CCDC39-205ENST00000485055 TMEM263Q8WUH6 116 aaKnown RBP3.53□□□□□ -1.85
CCDC39-205ENST00000485055 ST20Q9HBF5 79 aa3.53□□□□□ -1.85
CCDC39-205ENST00000485055 NUPR1O60356 82 aa3.52□□□□□ -1.85
CCDC39-205ENST00000485055 SMIM29Q86T20 159 aa3.52□□□□□ -1.85
CCDC39-205ENST00000485055 CEND1Q8N111 149 aa3.52□□□□□ -1.85
CCDC39-205ENST00000485055 CIRBP-AS1Q8TBR5 109 aa3.52□□□□□ -1.85
CCDC39-205ENST00000485055 DEFB131BA0A096LNP1 70 aa3.52□□□□□ -1.85
CCDC39-205ENST00000485055 TLX1NBP0CAT3 122 aa3.52□□□□□ -1.85
CCDC39-205ENST00000485055 LYZP61626 148 aa3.52□□□□□ -1.85
CCDC39-205ENST00000485055 WFDC2Q14508 124 aa3.52□□□□□ -1.85
CCDC39-205ENST00000485055 BVES-AS1Q5T3Y7 98 aa3.52□□□□□ -1.85
CCDC39-205ENST00000485055 XP32Q5T750 250 aa3.52□□□□□ -1.85
CCDC39-205ENST00000485055 CHCHD1Q96BP2 118 aaKnown RBP3.52□□□□□ -1.85
CCDC39-205ENST00000485055 PKD1P98161 4303 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 IGHV3-49A0A0A0MS15 119 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 A6NN06 94 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 APCSP02743 223 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 IAPPP10997 89 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 SPANXN5Q5MJ07 72 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 DPPA3Q6W0C5 159 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 Q6ZTC4 211 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 AMN1Q8IY45 258 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 FAM167A-AS1Q96KT0 104 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 SCGB3A1Q96QR1 104 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 RPS10P5Q9NQ39 176 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 NBEAL2Q6ZNJ1 2754 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 IGHV3OR16-8A0A075B7F1 116 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 LOC107984156A0A0G2JMH3 177 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 ASIPP42127 132 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 SPATA45Q537H7 98 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 C10orf113Q5VZT2 155 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 ARL17AQ8IVW1 177 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 Q8N1X5 172 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 SCRT1Q9BWW7 348 aa3.51□□□□□ -1.85
CCDC39-205ENST00000485055 IGHV3-66A0A0C4DH42 116 aa3.5□□□□□ -1.85
CCDC39-205ENST00000485055 MUC21A0A140T8X8 626 aa3.5□□□□□ -1.85
CCDC39-205ENST00000485055 SSSCA1O60232 199 aa3.5□□□□□ -1.85
CCDC39-205ENST00000485055 OR2T35Q8NGX2 323 aa3.5□□□□□ -1.85
CCDC39-205ENST00000485055 RETNLBQ9BQ08 111 aa3.5□□□□□ -1.85
CCDC39-205ENST00000485055 CYSTM1Q9H1C7 97 aa3.5□□□□□ -1.85
CCDC39-205ENST00000485055 LINC00474Q9P2X8 69 aa3.5□□□□□ -1.85
CCDC39-205ENST00000485055 HERC2O95714 4834 aa3.5□□□□□ -1.85
CCDC39-205ENST00000485055 TRBV6-1A0A0K0K1D8 114 aa3.5□□□□□ -1.85
CCDC39-205ENST00000485055 RTL8CO15255 209 aa3.5□□□□□ -1.85
CCDC39-205ENST00000485055 SPINK4O60575 86 aa3.5□□□□□ -1.85
CCDC39-205ENST00000485055 IGKCP01834 107 aa3.5□□□□□ -1.85
CCDC39-205ENST00000485055 CKS2P33552 79 aa3.5□□□□□ -1.85
CCDC39-205ENST00000485055 A0A1W2PPM0 123 aa3.49□□□□□ -1.85
CCDC39-205ENST00000485055 H3BRM9 83 aa3.49□□□□□ -1.85
CCDC39-205ENST00000485055 LY6G6CO95867 125 aa3.49□□□□□ -1.85
CCDC39-205ENST00000485055 FAM229BQ4G0N7 80 aa3.49□□□□□ -1.85
CCDC39-205ENST00000485055 KMT2AQ03164 3969 aa3.49□□□□□ -1.85
CCDC39-205ENST00000485055 A0A1B0GVX0 72 aa3.49□□□□□ -1.85
CCDC39-205ENST00000485055 H3BUT2 72 aa3.49□□□□□ -1.85
CCDC39-205ENST00000485055 Q8N8P6 123 aa3.49□□□□□ -1.85
CCDC39-205ENST00000485055 TIMM8BQ9Y5J9 83 aaPredicted RBP3.49□□□□□ -1.85
CCDC39-205ENST00000485055 ARL2-SNX15V9GYD0 113 aa3.49□□□□□ -1.85
CCDC39-205ENST00000485055 EPPK1P58107 5090 aaKnown RBP3.49□□□□□ -1.85
CCDC39-205ENST00000485055 DNAH11Q96DT5 4516 aa3.49□□□□□ -1.85
CCDC39-205ENST00000485055 RPL28P46779 137 aaKnown RBP3.49□□□□□ -1.85
CCDC39-205ENST00000485055 TENM2Q9NT68 2774 aa3.48□□□□□ -1.85
CCDC39-205ENST00000485055 TMEM223A0PJW6 202 aa3.48□□□□□ -1.85
CCDC39-205ENST00000485055 C17orf112F2Z3M2 114 aa3.48□□□□□ -1.85
CCDC39-205ENST00000485055 UBE2L5PA0A1B0GUS4 154 aa3.48□□□□□ -1.85
CCDC39-205ENST00000485055 HIST1H4AP62805 103 aaKnown RBP3.48□□□□□ -1.85
CCDC39-205ENST00000485055 UBE2L3P68036 154 aaKnown RBP3.48□□□□□ -1.85
CCDC39-205ENST00000485055 SLC25A20O43772 301 aa3.47□□□□□ -1.85
CCDC39-205ENST00000485055 SEC11AP67812 179 aa3.47□□□□□ -1.85
CCDC39-205ENST00000485055 C7orf77A4D0Y5 90 aa3.47□□□□□ -1.85
CCDC39-205ENST00000485055 K7ERS5 55 aa3.47□□□□□ -1.85
CCDC39-205ENST00000485055 LECT2O14960 151 aa3.47□□□□□ -1.85
CCDC39-205ENST00000485055 SERF2P84101 59 aa3.47□□□□□ -1.85
CCDC39-205ENST00000485055 C1orf64Q8NEQ6 169 aa3.47□□□□□ -1.85
CCDC39-205ENST00000485055 IMMP2LQ96T52 175 aa3.47□□□□□ -1.85
CCDC39-205ENST00000485055 NBDYA0A0U1RRE5 68 aa3.46□□□□□ -1.85
CCDC39-205ENST00000485055 MRPS36P82909 103 aaKnown RBP3.46□□□□□ -1.85
CCDC39-205ENST00000485055 CAMK2N1Q7Z7J9 78 aa3.46□□□□□ -1.85
CCDC39-205ENST00000485055 KRTAP3-1Q9BYR8 98 aa3.46□□□□□ -1.85
CCDC39-205ENST00000485055 GNRH2O43555 120 aa3.46□□□□□ -1.86
CCDC39-205ENST00000485055 FXYD7P58549 80 aa3.46□□□□□ -1.86
CCDC39-205ENST00000485055 ATP11AUNQ6ZP68 121 aa3.46□□□□□ -1.86
CCDC39-205ENST00000485055 Q6ZRN7 208 aaPredicted RBP3.46□□□□□ -1.86
CCDC39-205ENST00000485055 C2orf91Q6ZV80 131 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms