RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TRBV30A0A0K0K1B3 111 aa7.62□□□□□ -1.19
MSH5-216ENST00000484309 FAM19A5Q7Z5A7 132 aaPredicted RBP7.62□□□□□ -1.19
MSH5-216ENST00000484309 LINC00469Q8N7U9 141 aa7.62□□□□□ -1.19
MSH5-216ENST00000484309 URB1-AS1Q96HZ7 61 aa7.62□□□□□ -1.19
MSH5-216ENST00000484309 TLX1NBP0CAT3 122 aa7.61□□□□□ -1.19
MSH5-216ENST00000484309 CKS1BP61024 79 aa7.61□□□□□ -1.19
MSH5-216ENST00000484309 SEC11AP67812 179 aa7.61□□□□□ -1.19
MSH5-216ENST00000484309 PMCHL1Q16048 86 aa7.61□□□□□ -1.19
MSH5-216ENST00000484309 C6orf226Q5I0X4 101 aa7.61□□□□□ -1.19
MSH5-216ENST00000484309 A0A096LNJ9 63 aa7.6□□□□□ -1.19
MSH5-216ENST00000484309 Q8IZM0 81 aa7.6□□□□□ -1.19
MSH5-216ENST00000484309 CST9LQ9H4G1 147 aa7.6□□□□□ -1.19
MSH5-216ENST00000484309 TINCRA0A1B0GVN0 87 aa7.59□□□□□ -1.19
MSH5-216ENST00000484309 LINC01549A6NIU2 74 aa7.59□□□□□ -1.19
MSH5-216ENST00000484309 SMIM1B2RUZ4 78 aa7.59□□□□□ -1.19
MSH5-216ENST00000484309 NDUFC2-KCTD14E9PQ53 114 aa7.59□□□□□ -1.19
MSH5-216ENST00000484309 SPINK8P0C7L1 97 aa7.59□□□□□ -1.19
MSH5-216ENST00000484309 NDUFA6P56556 154 aa7.59□□□□□ -1.19
MSH5-216ENST00000484309 PMVKQ15126 192 aa7.59□□□□□ -1.19
MSH5-216ENST00000484309 PSORS1C2Q9UIG4 136 aa7.59□□□□□ -1.19
MSH5-216ENST00000484309 LINC00614P0C842 121 aa7.58□□□□□ -1.2
MSH5-216ENST00000484309 MT1HL1P0DM35 61 aa7.58□□□□□ -1.2
MSH5-216ENST00000484309 C9orf129Q5T035 196 aaKnown RBP7.58□□□□□ -1.2
MSH5-216ENST00000484309 KRTAP7-1Q8IUC3 87 aa7.58□□□□□ -1.2
MSH5-216ENST00000484309 CBLN2Q8IUK8 224 aa7.58□□□□□ -1.2
MSH5-216ENST00000484309 YPEL4Q96NS1 127 aa7.58□□□□□ -1.2
MSH5-216ENST00000484309 IGLV5-45A0A087WSX0 123 aa7.57□□□□□ -1.2
MSH5-216ENST00000484309 HBDP02042 147 aa7.57□□□□□ -1.2
MSH5-216ENST00000484309 C1orf137Q5JT78 98 aa7.57□□□□□ -1.2
MSH5-216ENST00000484309 KRTAP11-1Q8IUC1 163 aa7.57□□□□□ -1.2
MSH5-216ENST00000484309 COX7B2Q8TF08 81 aa7.57□□□□□ -1.2
MSH5-216ENST00000484309 F8VRH5 84 aa7.56□□□□□ -1.2
MSH5-216ENST00000484309 M0QXV9 152 aa7.56□□□□□ -1.2
MSH5-216ENST00000484309 PDZD11Q5EBL8 140 aa7.56□□□□□ -1.2
MSH5-216ENST00000484309 SPINK6Q6UWN8 80 aa7.56□□□□□ -1.2
MSH5-216ENST00000484309 XAGE1AQ9HD64 81 aa7.56□□□□□ -1.2
MSH5-216ENST00000484309 SRSF9Q13242 221 aaKnown RBP eCLIP7.55□□□□□ -1.2
MSH5-216ENST00000484309 SLC7A5P1Q8MH63 180 aa7.55□□□□□ -1.2
MSH5-216ENST00000484309 IGLC3P0DOY3 106 aa7.54□□□□□ -1.2
MSH5-216ENST00000484309 CXCL5P42830 114 aa7.54□□□□□ -1.2
MSH5-216ENST00000484309 RAB5BP61020 215 aa7.54□□□□□ -1.2
MSH5-216ENST00000484309 UBE2BP63146 152 aa7.54□□□□□ -1.2
MSH5-216ENST00000484309 SERTAD4-AS1Q5TG53 156 aa7.54□□□□□ -1.2
MSH5-216ENST00000484309 H3BRM9 83 aa7.53□□□□□ -1.2
MSH5-216ENST00000484309 ZNF22P17026 224 aaPredicted RBP7.53□□□□□ -1.2
MSH5-216ENST00000484309 ODF1Q14990 250 aa7.53□□□□□ -1.2
MSH5-216ENST00000484309 TNXBP22105 4242 aa7.52□□□□□ -1.21
MSH5-216ENST00000484309 REG3GQ6UW15 175 aa7.52□□□□□ -1.21
MSH5-216ENST00000484309 BAGE3Q86Y29 109 aa7.52□□□□□ -1.21
MSH5-216ENST00000484309 LINC01600Q96MT4 127 aa7.52□□□□□ -1.21
MSH5-216ENST00000484309 C11orf86A6NJI1 115 aa7.51□□□□□ -1.21
MSH5-216ENST00000484309 ATP5LO75964 103 aa7.51□□□□□ -1.21
MSH5-216ENST00000484309 IGLV7-43P04211 117 aa7.51□□□□□ -1.21
MSH5-216ENST00000484309 IGLV5-39A0A0G2JS06 123 aa7.49□□□□□ -1.21
MSH5-216ENST00000484309 TRGC2P03986 189 aa7.49□□□□□ -1.21
MSH5-216ENST00000484309 TMEM170BQ5T4T1 132 aa7.49□□□□□ -1.21
MSH5-216ENST00000484309 FAM19A2Q8N3H0 131 aa7.49□□□□□ -1.21
MSH5-216ENST00000484309 CHCHD1Q96BP2 118 aaKnown RBP7.49□□□□□ -1.21
MSH5-216ENST00000484309 PLA2G2DQ9UNK4 145 aa7.49□□□□□ -1.21
MSH5-216ENST00000484309 CHTOPQ9Y3Y2 248 aaKnown RBP7.49□□□□□ -1.21
MSH5-216ENST00000484309 C22orf24Q9Y442 160 aa7.49□□□□□ -1.21
MSH5-216ENST00000484309 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
MSH5-216ENST00000484309 HSBP1O75506 76 aa7.47□□□□□ -1.21
MSH5-216ENST00000484309 PFN2P35080 140 aa7.47□□□□□ -1.21
MSH5-216ENST00000484309 IFI27L1Q96BM0 104 aa7.47□□□□□ -1.21
MSH5-216ENST00000484309 ZNF625Q96I27 306 aaPredicted RBP7.47□□□□□ -1.21
MSH5-216ENST00000484309 DIRC1Q969H9 104 aa7.46□□□□□ -1.22
MSH5-216ENST00000484309 GAGE10A6NGK3 116 aa7.45□□□□□ -1.22
MSH5-216ENST00000484309 H0Y8G0 127 aa7.45□□□□□ -1.22
MSH5-216ENST00000484309 H0Y9J4 135 aa7.45□□□□□ -1.22
MSH5-216ENST00000484309 KRTAP10-8P60410 259 aa7.45□□□□□ -1.22
MSH5-216ENST00000484309 MRPL55Q7Z7F7 128 aaKnown RBP7.45□□□□□ -1.22
MSH5-216ENST00000484309 RPL37AP8A6NKH3 93 aa7.44□□□□□ -1.22
MSH5-216ENST00000484309 SCO1O75880 301 aa7.44□□□□□ -1.22
MSH5-216ENST00000484309 SERF1AO75920 110 aa7.44□□□□□ -1.22
MSH5-216ENST00000484309 LINC00310P59036 64 aa7.44□□□□□ -1.22
MSH5-216ENST00000484309 LBHQ53QV2 105 aaPredicted RBP7.44□□□□□ -1.22
MSH5-216ENST00000484309 ERG28Q9UKR5 140 aa7.44□□□□□ -1.22
MSH5-216ENST00000484309 TRAV12-1A0A0B4J245 112 aa7.43□□□□□ -1.22
MSH5-216ENST00000484309 COLCA2A8K830 154 aa7.43□□□□□ -1.22
MSH5-216ENST00000484309 LINC00167Q96N53 147 aa7.43□□□□□ -1.22
MSH5-216ENST00000484309 TP73-AS1Q9UF72 201 aa7.43□□□□□ -1.22
MSH5-216ENST00000484309 TMEM223A0PJW6 202 aa7.42□□□□□ -1.22
MSH5-216ENST00000484309 NUPR1O60356 82 aa7.42□□□□□ -1.22
MSH5-216ENST00000484309 PRR26Q8N8Z3 221 aa7.42□□□□□ -1.22
MSH5-216ENST00000484309 NKAPP1Q8N9T2 125 aa7.42□□□□□ -1.22
MSH5-216ENST00000484309 A0A0U1RRA0 63 aa7.41□□□□□ -1.22
MSH5-216ENST00000484309 SND1-IT1Q9HBX3 110 aa7.41□□□□□ -1.22
MSH5-216ENST00000484309 IGLV5-37A0A075B6J1 123 aa7.4□□□□□ -1.22
MSH5-216ENST00000484309 LEPROTL1O95214 131 aa7.4□□□□□ -1.22
MSH5-216ENST00000484309 FABP4P15090 132 aa7.4□□□□□ -1.22
MSH5-216ENST00000484309 IGKV2-28A0A075B6P5 120 aa7.39□□□□□ -1.23
MSH5-216ENST00000484309 ZNF861PO60384 105 aa7.39□□□□□ -1.23
MSH5-216ENST00000484309 IGKV2D-28P01615 120 aa7.39□□□□□ -1.23
MSH5-216ENST00000484309 KRTAP1-4P0C5Y4 121 aa7.39□□□□□ -1.23
MSH5-216ENST00000484309 Q8NDZ9 215 aa7.39□□□□□ -1.23
MSH5-216ENST00000484309 BCE1O60756 84 aa7.38□□□□□ -1.23
MSH5-216ENST00000484309 VPREB1P12018 145 aa7.38□□□□□ -1.23
MSH5-216ENST00000484309 LINC00158P58513 81 aa7.38□□□□□ -1.23
MSH5-216ENST00000484309 COX17Q14061 63 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms