RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 C10orf113Q5VZT2 155 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 Q6JHZ5 121 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 C6orf201Q7Z4U5 140 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 RGPD5Q99666 1765 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 DOCK11Q5JSL3 2073 aa1.01□□□□□ -2.25
LAPTM4A-202ENST00000483117 SSC5DA1L4H1 1573 aa1.01□□□□□ -2.25
LAPTM4A-202ENST00000483117 KMT2BQ9UMN6 2715 aaPredicted RBP1.01□□□□□ -2.25
LAPTM4A-202ENST00000483117 HEPN1Q6WQI6 88 aa1.01□□□□□ -2.25
LAPTM4A-202ENST00000483117 CRYBG1Q9Y4K1 1723 aa1.01□□□□□ -2.25
LAPTM4A-202ENST00000483117 ZC3H13Q5T200 1668 aaKnown RBP1□□□□□ -2.25
LAPTM4A-202ENST00000483117 PPRC1Q5VV67 1664 aaKnown RBP1□□□□□ -2.25
LAPTM4A-202ENST00000483117 SAMD9Q5K651 1589 aa1□□□□□ -2.25
LAPTM4A-202ENST00000483117 SETBP1Q9Y6X0 1596 aa1□□□□□ -2.25
LAPTM4A-202ENST00000483117 MYH4Q9Y623 1939 aa1□□□□□ -2.25
LAPTM4A-202ENST00000483117 HMGA1P17096 107 aaKnown RBP1□□□□□ -2.25
LAPTM4A-202ENST00000483117 HAMPP81172 84 aa1□□□□□ -2.25
LAPTM4A-202ENST00000483117 UBE2DNLQ8IWF7 75 aa1□□□□□ -2.25
LAPTM4A-202ENST00000483117 DEFB107AQ8IZN7 70 aa1□□□□□ -2.25
LAPTM4A-202ENST00000483117 FDCSPQ8NFU4 85 aa1□□□□□ -2.25
LAPTM4A-202ENST00000483117 SCN11AQ9UI33 1791 aa1□□□□□ -2.25
LAPTM4A-202ENST00000483117 C5P01031 1676 aa1□□□□□ -2.25
LAPTM4A-202ENST00000483117 TARBP1Q13395 1621 aaKnown RBP1□□□□□ -2.25
LAPTM4A-202ENST00000483117 HFM1A2PYH4 1435 aa0.99□□□□□ -2.25
LAPTM4A-202ENST00000483117 LAMA4Q16363 1823 aa0.99□□□□□ -2.25
LAPTM4A-202ENST00000483117 A0A0G2JMZ2 1700 aa0.99□□□□□ -2.25
LAPTM4A-202ENST00000483117 XRN1Q8IZH2 1706 aaKnown RBP0.99□□□□□ -2.25
LAPTM4A-202ENST00000483117 TRBV7-4A0A0J9YYF1 115 aa0.99□□□□□ -2.25
LAPTM4A-202ENST00000483117 IFI27P40305 119 aaPredicted RBP0.99□□□□□ -2.25
LAPTM4A-202ENST00000483117 Q5BKY6 102 aa0.99□□□□□ -2.25
LAPTM4A-202ENST00000483117 SPINK9Q5DT21 86 aa0.99□□□□□ -2.25
LAPTM4A-202ENST00000483117 S100ZQ8WXG8 99 aa0.99□□□□□ -2.25
LAPTM4A-202ENST00000483117 EFCAB5A4FU69 1503 aa0.99□□□□□ -2.25
LAPTM4A-202ENST00000483117 ASCC3Q8N3C0 2202 aaKnown RBP0.99□□□□□ -2.25
LAPTM4A-202ENST00000483117 ZNF236Q9UL36 1845 aa0.99□□□□□ -2.25
LAPTM4A-202ENST00000483117 RGPD2P0DJD1 1756 aa0.98□□□□□ -2.25
LAPTM4A-202ENST00000483117 KNDC1Q76NI1 1749 aa0.98□□□□□ -2.25
LAPTM4A-202ENST00000483117 Q6ZSA8 131 aa0.98□□□□□ -2.25
LAPTM4A-202ENST00000483117 MAGI3Q5TCQ9 1506 aa0.98□□□□□ -2.25
LAPTM4A-202ENST00000483117 MYO5CQ9NQX4 1742 aa0.98□□□□□ -2.25
LAPTM4A-202ENST00000483117 SDK1Q7Z5N4 2213 aa0.97□□□□□ -2.25
LAPTM4A-202ENST00000483117 IQGAP3Q86VI3 1631 aa0.97□□□□□ -2.25
LAPTM4A-202ENST00000483117 MROH1Q8NDA8 1641 aa0.97□□□□□ -2.25
LAPTM4A-202ENST00000483117 ZFHX3Q15911 3703 aa0.97□□□□□ -2.25
LAPTM4A-202ENST00000483117 INO80Q9ULG1 1556 aaPredicted RBP0.97□□□□□ -2.25
LAPTM4A-202ENST00000483117 NCOA6Q14686 2063 aaPredicted RBP0.97□□□□□ -2.25
LAPTM4A-202ENST00000483117 A0A087WWC5 75 aa0.97□□□□□ -2.25
LAPTM4A-202ENST00000483117 A0A087WXM4 84 aa0.97□□□□□ -2.25
LAPTM4A-202ENST00000483117 A0A1B0GU69 56 aa0.97□□□□□ -2.25
LAPTM4A-202ENST00000483117 LTN1O94822 1766 aa0.97□□□□□ -2.25
LAPTM4A-202ENST00000483117 TECTAO75443 2155 aa0.97□□□□□ -2.25
LAPTM4A-202ENST00000483117 ANKRD50Q9ULJ7 1429 aa0.97□□□□□ -2.25
LAPTM4A-202ENST00000483117 ERCC6L2Q5T890 1561 aa0.96□□□□□ -2.26
LAPTM4A-202ENST00000483117 KDM3BQ7LBC6 1761 aa0.96□□□□□ -2.26
LAPTM4A-202ENST00000483117 FLG2Q5D862 2391 aaPredicted RBP0.96□□□□□ -2.26
LAPTM4A-202ENST00000483117 A0A0D9SFI3 127 aa0.96□□□□□ -2.26
LAPTM4A-202ENST00000483117 SPINK7P58062 85 aa0.96□□□□□ -2.26
LAPTM4A-202ENST00000483117 PIK3C2BO00750 1634 aa0.96□□□□□ -2.26
LAPTM4A-202ENST00000483117 LRP6O75581 1613 aa0.96□□□□□ -2.26
LAPTM4A-202ENST00000483117 MYO7BQ6PIF6 2116 aa0.95□□□□□ -2.26
LAPTM4A-202ENST00000483117 PKD1L3Q7Z443 1732 aa0.95□□□□□ -2.26
LAPTM4A-202ENST00000483117 CD163L1Q9NR16 1453 aa0.95□□□□□ -2.26
LAPTM4A-202ENST00000483117 C10orf95Q9H7T3 257 aa0.95□□□□□ -2.26
LAPTM4A-202ENST00000483117 KIAA0556O60303 1618 aa0.95□□□□□ -2.26
LAPTM4A-202ENST00000483117 CNTRLQ7Z7A1 2325 aa0.95□□□□□ -2.26
LAPTM4A-202ENST00000483117 CEP170BQ9Y4F5 1589 aaPredicted RBP0.95□□□□□ -2.26
LAPTM4A-202ENST00000483117 LRRC37AA6NMS7 1700 aa0.95□□□□□ -2.26
LAPTM4A-202ENST00000483117 MED13LQ71F56 2210 aa0.95□□□□□ -2.26
LAPTM4A-202ENST00000483117 TULP4Q9NRJ4 1543 aa0.94□□□□□ -2.26
LAPTM4A-202ENST00000483117 NHSL1Q5SYE7 1610 aa0.94□□□□□ -2.26
LAPTM4A-202ENST00000483117 RPL38P63173 70 aaKnown RBP0.94□□□□□ -2.26
LAPTM4A-202ENST00000483117 SSBP3-AS1Q7Z2R9 100 aa0.94□□□□□ -2.26
LAPTM4A-202ENST00000483117 CNFNQ9BYD5 112 aa0.94□□□□□ -2.26
LAPTM4A-202ENST00000483117 RGPD1P0DJD0 1748 aa0.93□□□□□ -2.26
LAPTM4A-202ENST00000483117 COX8AP10176 69 aa0.93□□□□□ -2.26
LAPTM4A-202ENST00000483117 DEFB112Q30KQ8 113 aa0.93□□□□□ -2.26
LAPTM4A-202ENST00000483117 PIGYQ3MUY2 71 aa0.93□□□□□ -2.26
LAPTM4A-202ENST00000483117 GAFA1Q96PS6 74 aa0.93□□□□□ -2.26
LAPTM4A-202ENST00000483117 LRRC7Q96NW7 1537 aa0.93□□□□□ -2.26
LAPTM4A-202ENST00000483117 PAPPA2Q9BXP8 1791 aa0.93□□□□□ -2.26
LAPTM4A-202ENST00000483117 TIAM1Q13009 1591 aa0.92□□□□□ -2.26
LAPTM4A-202ENST00000483117 F5P12259 2224 aa0.92□□□□□ -2.26
LAPTM4A-202ENST00000483117 TRAV21A0A0B4J279 112 aa0.92□□□□□ -2.26
LAPTM4A-202ENST00000483117 WFDC9Q8NEX5 89 aa0.92□□□□□ -2.26
LAPTM4A-202ENST00000483117 ASXL1Q8IXJ9 1541 aa0.92□□□□□ -2.26
LAPTM4A-202ENST00000483117 ABCA1O95477 2261 aa0.92□□□□□ -2.26
LAPTM4A-202ENST00000483117 PAPPAQ13219 1627 aa0.92□□□□□ -2.26
LAPTM4A-202ENST00000483117 SRCAPQ6ZRS2 3230 aa0.91□□□□□ -2.26
LAPTM4A-202ENST00000483117 LINC00959A0A1B0GUT2 108 aa0.91□□□□□ -2.26
LAPTM4A-202ENST00000483117 ATXN8Q156A1 80 aa0.91□□□□□ -2.26
LAPTM4A-202ENST00000483117 USMG5Q96IX5 58 aa0.91□□□□□ -2.26
LAPTM4A-202ENST00000483117 TP53AIP1Q9HCN2 124 aa0.91□□□□□ -2.26
LAPTM4A-202ENST00000483117 RP1L1Q8IWN7 2480 aaPredicted RBP0.91□□□□□ -2.26
LAPTM4A-202ENST00000483117 PLCH1Q4KWH8 1693 aa0.91□□□□□ -2.26
LAPTM4A-202ENST00000483117 LMTK2Q8IWU2 1503 aa0.9□□□□□ -2.26
LAPTM4A-202ENST00000483117 CICQ96RK0 1608 aaPredicted RBP0.9□□□□□ -2.26
LAPTM4A-202ENST00000483117 CCDC180Q9P1Z9 1646 aa0.9□□□□□ -2.26
LAPTM4A-202ENST00000483117 LCE6AA0A183 80 aa0.9□□□□□ -2.27
LAPTM4A-202ENST00000483117 H3BVH4 76 aa0.9□□□□□ -2.27
LAPTM4A-202ENST00000483117 COX7BP24311 80 aa0.9□□□□□ -2.27
LAPTM4A-202ENST00000483117 COX6A2Q02221 97 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms