RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 MRPS36P82909 103 aaKnown RBP8.57□□□□□ -1.04
RAPGEF3-210ENST00000482843 ADAMTSL4-AS1Q5T5F5 129 aa8.57□□□□□ -1.04
RAPGEF3-210ENST00000482843 TEX49A0A1B0GTD5 131 aa8.56□□□□□ -1.04
RAPGEF3-210ENST00000482843 UBE2D1P51668 147 aa8.56□□□□□ -1.04
RAPGEF3-210ENST00000482843 BEAN1Q3B7T3 259 aa8.56□□□□□ -1.04
RAPGEF3-210ENST00000482843 C16orf74Q96GX8 76 aa8.56□□□□□ -1.04
RAPGEF3-210ENST00000482843 VSIG2Q96IQ7 327 aa8.56□□□□□ -1.04
RAPGEF3-210ENST00000482843 AMELXQ99217 191 aa8.56□□□□□ -1.04
RAPGEF3-210ENST00000482843 HIVEP1P15822 2718 aa8.56□□□□□ -1.04
RAPGEF3-210ENST00000482843 CMC4P56277 68 aaPredicted RBP8.55□□□□□ -1.04
RAPGEF3-210ENST00000482843 DEFB135Q30KP9 77 aa8.55□□□□□ -1.04
RAPGEF3-210ENST00000482843 PLAC8L1A1L4L8 177 aa8.55□□□□□ -1.04
RAPGEF3-210ENST00000482843 NTM-AS1Q6ZSK4 140 aa8.55□□□□□ -1.04
RAPGEF3-210ENST00000482843 MAST4O15021 2626 aa8.55□□□□□ -1.04
RAPGEF3-210ENST00000482843 ATP5G1P05496 136 aa8.55□□□□□ -1.04
RAPGEF3-210ENST00000482843 TENM1Q9UKZ4 2725 aa8.54□□□□□ -1.04
RAPGEF3-210ENST00000482843 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.54□□□□□ -1.04
RAPGEF3-210ENST00000482843 A8MTW9 85 aa8.54□□□□□ -1.04
RAPGEF3-210ENST00000482843 C5orf38Q86SI9 138 aa8.54□□□□□ -1.04
RAPGEF3-210ENST00000482843 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.54□□□□□ -1.04
RAPGEF3-210ENST00000482843 TIMM17BO60830 172 aa8.54□□□□□ -1.04
RAPGEF3-210ENST00000482843 NSD1Q96L73 2696 aaPredicted RBP8.54□□□□□ -1.04
RAPGEF3-210ENST00000482843 GIG44P09565 113 aaPredicted RBP8.53□□□□□ -1.04
RAPGEF3-210ENST00000482843 USP17L23D6RBM5 183 aa8.53□□□□□ -1.04
RAPGEF3-210ENST00000482843 LINC00242Q5T6M2 205 aa8.53□□□□□ -1.04
RAPGEF3-210ENST00000482843 LINC00474Q9P2X8 69 aa8.53□□□□□ -1.04
RAPGEF3-210ENST00000482843 GYPEP15421 78 aa8.53□□□□□ -1.04
RAPGEF3-210ENST00000482843 SMIM26A0A096LP01 95 aa8.52□□□□□ -1.05
RAPGEF3-210ENST00000482843 DAD1P61803 113 aa8.52□□□□□ -1.05
RAPGEF3-210ENST00000482843 FAM104AQ969W3 186 aa8.52□□□□□ -1.05
RAPGEF3-210ENST00000482843 TRBV10-1A0A0K0K1A3 114 aa8.52□□□□□ -1.05
RAPGEF3-210ENST00000482843 COX6CP09669 75 aa8.52□□□□□ -1.05
RAPGEF3-210ENST00000482843 SPATA3Q8NHX4 192 aa8.52□□□□□ -1.05
RAPGEF3-210ENST00000482843 IGHV3-33P01772 117 aa8.52□□□□□ -1.05
RAPGEF3-210ENST00000482843 UBE2D3P61077 147 aa8.52□□□□□ -1.05
RAPGEF3-210ENST00000482843 UBE2D2P62837 147 aa8.52□□□□□ -1.05
RAPGEF3-210ENST00000482843 PIK3CD-AS1Q5SR53 167 aa8.51□□□□□ -1.05
RAPGEF3-210ENST00000482843 C16orf95Q9H693 158 aa8.51□□□□□ -1.05
RAPGEF3-210ENST00000482843 XCL1P47992 114 aa8.51□□□□□ -1.05
RAPGEF3-210ENST00000482843 LINC00158P58513 81 aa8.51□□□□□ -1.05
RAPGEF3-210ENST00000482843 KRTAP10-3P60369 221 aa8.51□□□□□ -1.05
RAPGEF3-210ENST00000482843 MDFIQ99750 246 aa8.51□□□□□ -1.05
RAPGEF3-210ENST00000482843 EIF4EBP3O60516 100 aaPredicted RBP8.5□□□□□ -1.05
RAPGEF3-210ENST00000482843 CLEC2BQ92478 149 aa8.5□□□□□ -1.05
RAPGEF3-210ENST00000482843 STAB1Q9NY15 2570 aa8.5□□□□□ -1.05
RAPGEF3-210ENST00000482843 TRBV7-7A0A0K0K1E9 115 aa8.5□□□□□ -1.05
RAPGEF3-210ENST00000482843 ATOX1O00244 68 aa8.5□□□□□ -1.05
RAPGEF3-210ENST00000482843 NOTCH1P46531 2555 aa8.5□□□□□ -1.05
RAPGEF3-210ENST00000482843 CDC42SE2Q9NRR3 84 aa8.49□□□□□ -1.05
RAPGEF3-210ENST00000482843 IGLV4-60A0A075B6I1 120 aa8.49□□□□□ -1.05
RAPGEF3-210ENST00000482843 IGLV10-54A0A075B6I4 117 aa8.49□□□□□ -1.05
RAPGEF3-210ENST00000482843 MIAQ16674 131 aa8.49□□□□□ -1.05
RAPGEF3-210ENST00000482843 FAM222AQ5U5X8 452 aa8.48□□□□□ -1.05
RAPGEF3-210ENST00000482843 UBE2WQ96B02 151 aa8.48□□□□□ -1.05
RAPGEF3-210ENST00000482843 C8orf87E5RJ46 101 aa8.48□□□□□ -1.05
RAPGEF3-210ENST00000482843 TRIAP1O43715 76 aa8.48□□□□□ -1.05
RAPGEF3-210ENST00000482843 FP248Q71RG6 208 aaPredicted RBP8.48□□□□□ -1.05
RAPGEF3-210ENST00000482843 C19orf73Q9NVV2 129 aa8.48□□□□□ -1.05
RAPGEF3-210ENST00000482843 SERP1Q9Y6X1 66 aa8.47□□□□□ -1.05
RAPGEF3-210ENST00000482843 FHL2Q14192 279 aa8.47□□□□□ -1.05
RAPGEF3-210ENST00000482843 ATXN8Q156A1 80 aa8.47□□□□□ -1.05
RAPGEF3-210ENST00000482843 SOSTDC1Q6X4U4 206 aa8.47□□□□□ -1.05
RAPGEF3-210ENST00000482843 TRBV6-8A0A0A6YYG3 113 aa8.46□□□□□ -1.05
RAPGEF3-210ENST00000482843 TRBV6-4A0A1B0GX49 114 aa8.46□□□□□ -1.05
RAPGEF3-210ENST00000482843 SMIM1B2RUZ4 78 aa8.46□□□□□ -1.05
RAPGEF3-210ENST00000482843 ICOSQ9Y6W8 199 aa8.46□□□□□ -1.05
RAPGEF3-210ENST00000482843 A0A0A0MQY5 61 aa8.45□□□□□ -1.06
RAPGEF3-210ENST00000482843 CD164L2Q6UWJ8 174 aa8.45□□□□□ -1.06
RAPGEF3-210ENST00000482843 C2orf82Q6UX34 121 aa8.45□□□□□ -1.06
RAPGEF3-210ENST00000482843 A0A0B4J2C4 111 aa8.45□□□□□ -1.06
RAPGEF3-210ENST00000482843 NDUFC2-KCTD14E9PQ53 114 aa8.45□□□□□ -1.06
RAPGEF3-210ENST00000482843 CSNK1G2-AS1Q8NCQ2 148 aa8.44□□□□□ -1.06
RAPGEF3-210ENST00000482843 LINC00308Q8TCZ7 52 aa8.44□□□□□ -1.06
RAPGEF3-210ENST00000482843 NDUFA1O15239 70 aa8.44□□□□□ -1.06
RAPGEF3-210ENST00000482843 C9orf66Q5T8R8 295 aa8.44□□□□□ -1.06
RAPGEF3-210ENST00000482843 LITAFQ99732 161 aa8.44□□□□□ -1.06
RAPGEF3-210ENST00000482843 ANGP03950 147 aaKnown RBP8.44□□□□□ -1.06
RAPGEF3-210ENST00000482843 MIR7-3HGQ8N6C7 128 aa8.44□□□□□ -1.06
RAPGEF3-210ENST00000482843 AKAP9Q99996 3911 aa8.43□□□□□ -1.06
RAPGEF3-210ENST00000482843 COX7B2Q8TF08 81 aa8.43□□□□□ -1.06
RAPGEF3-210ENST00000482843 IMUPQ9GZP8 106 aa8.42□□□□□ -1.06
RAPGEF3-210ENST00000482843 SERP2Q8N6R1 65 aa8.42□□□□□ -1.06
RAPGEF3-210ENST00000482843 COL6A5A8TX70 2615 aa8.42□□□□□ -1.06
RAPGEF3-210ENST00000482843 PRO0255Q9UI72 69 aa8.42□□□□□ -1.06
RAPGEF3-210ENST00000482843 KMT2BQ9UMN6 2715 aaPredicted RBP8.42□□□□□ -1.06
RAPGEF3-210ENST00000482843 C6orf223Q8N319 242 aa8.41□□□□□ -1.06
RAPGEF3-210ENST00000482843 SPANXDQ9BXN6 97 aa8.41□□□□□ -1.06
RAPGEF3-210ENST00000482843 Q8N3U1 123 aa8.41□□□□□ -1.06
RAPGEF3-210ENST00000482843 OVOL2Q9BRP0 275 aa8.41□□□□□ -1.06
RAPGEF3-210ENST00000482843 IGHV4-28A0A0C4DH34 117 aa8.4□□□□□ -1.06
RAPGEF3-210ENST00000482843 LINC00269Q8N2A0 174 aa8.4□□□□□ -1.06
RAPGEF3-210ENST00000482843 C20orf197Q8N268 126 aa8.4□□□□□ -1.07
RAPGEF3-210ENST00000482843 CRPP02741 224 aa8.39□□□□□ -1.07
RAPGEF3-210ENST00000482843 Q6ZRU5 148 aa8.39□□□□□ -1.07
RAPGEF3-210ENST00000482843 SND1-IT1Q9HBX3 110 aa8.39□□□□□ -1.07
RAPGEF3-210ENST00000482843 COPS9Q8WXC6 57 aa8.38□□□□□ -1.07
RAPGEF3-210ENST00000482843 X6R8D5 127 aa8.38□□□□□ -1.07
RAPGEF3-210ENST00000482843 NBEAL1Q6ZS30 2694 aa8.38□□□□□ -1.07
RAPGEF3-210ENST00000482843 FAM19A3Q7Z5A8 133 aa8.38□□□□□ -1.07
RAPGEF3-210ENST00000482843 IGLV5-39A0A0G2JS06 123 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms