RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 TP53RKQ96S44 253 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 RETNLBQ9BQ08 111 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 NAA60Q9H7X0 242 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 TIMM9Q9Y5J7 89 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 TRAV7A0A075B6U4 112 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 TRAV30A0A087WSZ9 112 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 A0A0J9YX75 114 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 A0A1W2PNM2 257 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 C9orf170A2RU37 121 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 SNRPGP15A8MWD9 76 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 TAX1BP3O14907 124 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 GNG7O60262 68 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 SFT2D2O95562 160 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 MT1FP04733 61 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 IL5P05113 134 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 SNCAP37840 140 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 Q56UQ5 140 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 BPIFA4PQ86YQ2 179 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 MBD3L1Q8WWY6 194 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 RHPN1-AS1Q9BWJ2 59 aa1.94□□□□□ -2.1
SHQ1-208ENST00000482785 A0A0J9YY99 117 aa1.93□□□□□ -2.1
SHQ1-208ENST00000482785 C1orf196B1AJZ1 125 aa1.93□□□□□ -2.1
SHQ1-208ENST00000482785 H7C2G1 150 aa1.93□□□□□ -2.1
SHQ1-208ENST00000482785 PITX3O75364 302 aa1.93□□□□□ -2.1
SHQ1-208ENST00000482785 TCL1BO95988 128 aa1.93□□□□□ -2.1
SHQ1-208ENST00000482785 IGKV1-17P01599 117 aa1.93□□□□□ -2.1
SHQ1-208ENST00000482785 IGLV6-57P01721 117 aa1.93□□□□□ -2.1
SHQ1-208ENST00000482785 RNASE2P10153 161 aaKnown RBP1.93□□□□□ -2.1
SHQ1-208ENST00000482785 SLC25A4P12235 298 aa1.93□□□□□ -2.1
SHQ1-208ENST00000482785 SLC25A6P12236 298 aa1.93□□□□□ -2.1
SHQ1-208ENST00000482785 EIF5AP63241 154 aaKnown RBP1.93□□□□□ -2.1
SHQ1-208ENST00000482785 SUPT4H1P63272 117 aaKnown RBP1.93□□□□□ -2.1
SHQ1-208ENST00000482785 Q8NDZ9 215 aa1.93□□□□□ -2.1
SHQ1-208ENST00000482785 RNASE11Q8TAA1 199 aaKnown RBP1.93□□□□□ -2.1
SHQ1-208ENST00000482785 ZNF431Q8TF32 576 aaPredicted RBP1.93□□□□□ -2.1
SHQ1-208ENST00000482785 PDCD10Q9BUL8 212 aa1.93□□□□□ -2.1
SHQ1-208ENST00000482785 OSTCQ9NRP0 149 aa1.93□□□□□ -2.1
SHQ1-208ENST00000482785 HHLA3Q9XRX5 114 aa1.93□□□□□ -2.1
SHQ1-208ENST00000482785 TRBV10-2A0A0K0K1G8 114 aa1.92□□□□□ -2.1
SHQ1-208ENST00000482785 ZNF705FA8MVS1 300 aaPredicted RBP1.92□□□□□ -2.1
SHQ1-208ENST00000482785 IGLC1P0CG04 106 aa1.92□□□□□ -2.1
SHQ1-208ENST00000482785 ZNF705BP0CI00 300 aaPredicted RBP1.92□□□□□ -2.1
SHQ1-208ENST00000482785 DEFB130BP0DP73 79 aa1.92□□□□□ -2.1
SHQ1-208ENST00000482785 DEFB130AP0DP74 79 aa1.92□□□□□ -2.1
SHQ1-208ENST00000482785 EIF2B2P49770 351 aaKnown RBP1.92□□□□□ -2.1
SHQ1-208ENST00000482785 FXYD2P54710 66 aa1.92□□□□□ -2.1
SHQ1-208ENST00000482785 SMCO1Q147U7 214 aa1.92□□□□□ -2.1
SHQ1-208ENST00000482785 SPINK9Q5DT21 86 aa1.92□□□□□ -2.1
SHQ1-208ENST00000482785 DCANP1Q8TF63 244 aa1.92□□□□□ -2.1
SHQ1-208ENST00000482785 CIB3Q96Q77 187 aaPredicted RBP1.92□□□□□ -2.1
SHQ1-208ENST00000482785 SPANXCQ9NY87 97 aa1.92□□□□□ -2.1
SHQ1-208ENST00000482785 MRPL36Q9P0J6 103 aaKnown RBP1.92□□□□□ -2.1
SHQ1-208ENST00000482785 EPDR1Q9UM22 224 aa1.92□□□□□ -2.1
SHQ1-208ENST00000482785 LAMTOR2Q9Y2Q5 125 aa1.92□□□□□ -2.1
SHQ1-208ENST00000482785 LY96Q9Y6Y9 160 aa1.92□□□□□ -2.1
SHQ1-208ENST00000482785 U3KQ87 197 aa1.92□□□□□ -2.1
SHQ1-208ENST00000482785 IGHV3-64A0A075B6Q5 118 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 IGKV2-24A0A0C4DH68 120 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 CEBPZOSA8MTT3 80 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 KRTAP9-6A8MVA2 160 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 M0R378 163 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 CFDP00746 253 aaPredicted RBP1.91□□□□□ -2.1
SHQ1-208ENST00000482785 PPBPP02775 128 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 TRGC2P03986 189 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 OR10J4P0C629 311 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 DEFB131AP59861 70 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 ZNF90Q03938 601 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 ZCCHC13Q8WW36 166 aaKnown RBP1.91□□□□□ -2.1
SHQ1-208ENST00000482785 HIST1H2BLQ99880 126 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 NMES1Q9C002 83 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 GSKIPQ9P0R6 139 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 RABAC1Q9UI14 185 aa1.91□□□□□ -2.1
SHQ1-208ENST00000482785 IGKV3-7A0A075B6H7 116 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 IGLV10-54A0A075B6I4 117 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 TRAV5A0A0B4J249 113 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 A8MTW9 85 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 FNDC10F2Z333 226 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 RNASE4P34096 147 aaKnown RBP1.9□□□□□ -2.11
SHQ1-208ENST00000482785 RRAS2P62070 204 aaPredicted RBP1.9□□□□□ -2.11
SHQ1-208ENST00000482785 SNRPD3P62318 126 aaKnown RBP1.9□□□□□ -2.11
SHQ1-208ENST00000482785 RPS28P62857 69 aaKnown RBP1.9□□□□□ -2.11
SHQ1-208ENST00000482785 UBE2BP63146 152 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 NDUFA5Q16718 116 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 DPPA3Q6W0C5 159 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 COX6B2Q6YFQ2 88 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 TVP23CQ96ET8 276 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 TRGV9Q99603 122 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 Q9BRP9 147 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 GGACTQ9BVM4 153 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 PSENENQ9NZ42 101 aa1.9□□□□□ -2.11
SHQ1-208ENST00000482785 A0A096LPF7 62 aa1.89□□□□□ -2.11
SHQ1-208ENST00000482785 MUC21A0A0G2JKD1 596 aa1.89□□□□□ -2.11
SHQ1-208ENST00000482785 MUC21A0A140T8X8 626 aa1.89□□□□□ -2.11
SHQ1-208ENST00000482785 C7orf71A4D174 169 aa1.89□□□□□ -2.11
SHQ1-208ENST00000482785 TMEM256-PLSCR3K7ERE1 68 aa1.89□□□□□ -2.11
SHQ1-208ENST00000482785 ARPC5O15511 151 aa1.89□□□□□ -2.11
SHQ1-208ENST00000482785 SSSCA1O60232 199 aa1.89□□□□□ -2.11
SHQ1-208ENST00000482785 SIX6O95475 246 aa1.89□□□□□ -2.11
SHQ1-208ENST00000482785 MPC2O95563 127 aa1.89□□□□□ -2.11
SHQ1-208ENST00000482785 METTL15P1P0C7V9 234 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms