RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 CHCHD5Q9BSY4 110 aa10.37□□□□□ -0.75
ATG4B-220ENST00000482507 PPDPFQ9H3Y8 114 aa10.37□□□□□ -0.75
ATG4B-220ENST00000482507 TRACP01848 142 aa10.36□□□□□ -0.75
ATG4B-220ENST00000482507 C5orf38Q86SI9 138 aa10.36□□□□□ -0.75
ATG4B-220ENST00000482507 BAALC-AS2P0C853 105 aa10.35□□□□□ -0.75
ATG4B-220ENST00000482507 SND1-IT1Q9HBX3 110 aa10.35□□□□□ -0.75
ATG4B-220ENST00000482507 DEFB130BP0DP73 79 aa10.35□□□□□ -0.75
ATG4B-220ENST00000482507 DEFB130AP0DP74 79 aa10.35□□□□□ -0.75
ATG4B-220ENST00000482507 Q9HAA7 133 aa10.35□□□□□ -0.75
ATG4B-220ENST00000482507 RPL28P46779 137 aaKnown RBP10.34□□□□□ -0.75
ATG4B-220ENST00000482507 CCL18P55774 89 aa10.34□□□□□ -0.75
ATG4B-220ENST00000482507 LINC00158P58513 81 aa10.34□□□□□ -0.75
ATG4B-220ENST00000482507 MRPL23Q16540 153 aaKnown RBP10.34□□□□□ -0.75
ATG4B-220ENST00000482507 A0A087WZ39 114 aa10.34□□□□□ -0.75
ATG4B-220ENST00000482507 SMCR5Q8TEV8 140 aa10.34□□□□□ -0.75
ATG4B-220ENST00000482507 NBEAL2Q6ZNJ1 2754 aa10.33□□□□□ -0.76
ATG4B-220ENST00000482507 TRAV13-2A0A0B4J235 113 aa10.33□□□□□ -0.76
ATG4B-220ENST00000482507 CRPP02741 224 aa10.33□□□□□ -0.76
ATG4B-220ENST00000482507 FAM222AQ5U5X8 452 aa10.33□□□□□ -0.76
ATG4B-220ENST00000482507 LINC00959A0A1B0GUT2 108 aa10.32□□□□□ -0.76
ATG4B-220ENST00000482507 CCDC179H3BU77 68 aa10.32□□□□□ -0.76
ATG4B-220ENST00000482507 SMIM11BQ8TCY0 68 aa10.32□□□□□ -0.76
ATG4B-220ENST00000482507 PFN2P35080 140 aa10.32□□□□□ -0.76
ATG4B-220ENST00000482507 C11orf68Q9H3H3 251 aaKnown RBP10.31□□□□□ -0.76
ATG4B-220ENST00000482507 A0A087WYN8 130 aa10.31□□□□□ -0.76
ATG4B-220ENST00000482507 OXLD1Q5BKU9 147 aa10.31□□□□□ -0.76
ATG4B-220ENST00000482507 B5MCH6 92 aa10.3□□□□□ -0.76
ATG4B-220ENST00000482507 GYPEP15421 78 aa10.3□□□□□ -0.76
ATG4B-220ENST00000482507 LINC00612Q8N6U2 182 aa10.3□□□□□ -0.76
ATG4B-220ENST00000482507 TRBV7-7A0A0K0K1E9 115 aa10.29□□□□□ -0.76
ATG4B-220ENST00000482507 IBA57-AS1B1ANH7 110 aa10.29□□□□□ -0.76
ATG4B-220ENST00000482507 WFDC9Q8NEX5 89 aa10.29□□□□□ -0.76
ATG4B-220ENST00000482507 ANK2Q01484 3957 aa10.29□□□□□ -0.76
ATG4B-220ENST00000482507 C9orf129Q5T035 196 aaKnown RBP10.29□□□□□ -0.76
ATG4B-220ENST00000482507 CMYA5Q8N3K9 4069 aa10.29□□□□□ -0.76
ATG4B-220ENST00000482507 A0A096LPF7 62 aa10.28□□□□□ -0.76
ATG4B-220ENST00000482507 XCL1P47992 114 aa10.28□□□□□ -0.76
ATG4B-220ENST00000482507 CLPSL2Q6UWE3 100 aa10.28□□□□□ -0.76
ATG4B-220ENST00000482507 KIR2DL5BQ8NHK3 375 aa10.28□□□□□ -0.76
ATG4B-220ENST00000482507 X6R8D5 127 aa10.28□□□□□ -0.76
ATG4B-220ENST00000482507 NOTCH1P46531 2555 aa10.28□□□□□ -0.76
ATG4B-220ENST00000482507 ACYP1P07311 99 aa10.27□□□□□ -0.76
ATG4B-220ENST00000482507 MALP21145 153 aa10.27□□□□□ -0.76
ATG4B-220ENST00000482507 C9orf66Q5T8R8 295 aa10.27□□□□□ -0.76
ATG4B-220ENST00000482507 SS18L2Q9UHA2 77 aa10.27□□□□□ -0.76
ATG4B-220ENST00000482507 MGAM2Q2M2H8 2515 aa10.26□□□□□ -0.77
ATG4B-220ENST00000482507 ATP5G1P05496 136 aa10.26□□□□□ -0.77
ATG4B-220ENST00000482507 SDIM1Q6ZPB5 146 aa10.26□□□□□ -0.77
ATG4B-220ENST00000482507 C6orf226Q5I0X4 101 aa10.25□□□□□ -0.77
ATG4B-220ENST00000482507 PAX4O43316 350 aa10.25□□□□□ -0.77
ATG4B-220ENST00000482507 Q8N3U1 123 aa10.24□□□□□ -0.77
ATG4B-220ENST00000482507 A0A1B0GUV1 79 aa10.23□□□□□ -0.77
ATG4B-220ENST00000482507 NBEAL1Q6ZS30 2694 aa10.23□□□□□ -0.77
ATG4B-220ENST00000482507 GAGE2AQ6NT46 116 aa10.23□□□□□ -0.77
ATG4B-220ENST00000482507 DEFB4AO15263 64 aa10.22□□□□□ -0.77
ATG4B-220ENST00000482507 LINC00643Q86TS7 51 aa10.22□□□□□ -0.77
ATG4B-220ENST00000482507 OR13C6PQ8NH95 151 aa10.22□□□□□ -0.77
ATG4B-220ENST00000482507 LECT2O14960 151 aa10.22□□□□□ -0.77
ATG4B-220ENST00000482507 PRR3P79522 188 aaKnown RBP10.22□□□□□ -0.77
ATG4B-220ENST00000482507 SS18Q15532 418 aa10.22□□□□□ -0.77
ATG4B-220ENST00000482507 PRO0255Q9UI72 69 aa10.22□□□□□ -0.77
ATG4B-220ENST00000482507 SLPIP03973 132 aa10.21□□□□□ -0.77
ATG4B-220ENST00000482507 KRTAP10-11P60412 298 aa10.21□□□□□ -0.77
ATG4B-220ENST00000482507 Q8IZM0 81 aa10.21□□□□□ -0.77
ATG4B-220ENST00000482507 DNHD1Q96M86 4753 aa10.21□□□□□ -0.78
ATG4B-220ENST00000482507 FAM236AA0A1B0GUQ0 79 aa10.21□□□□□ -0.78
ATG4B-220ENST00000482507 FAM236BA0A1B0GV22 79 aa10.21□□□□□ -0.78
ATG4B-220ENST00000482507 H0YGX0 51 aa10.21□□□□□ -0.78
ATG4B-220ENST00000482507 DNAL4O96015 105 aa10.21□□□□□ -0.78
ATG4B-220ENST00000482507 INAFM2P0DMQ5 153 aa10.21□□□□□ -0.78
ATG4B-220ENST00000482507 C14orf132Q9NPU4 83 aa10.2□□□□□ -0.78
ATG4B-220ENST00000482507 KIAA0087Q14695 138 aa10.19□□□□□ -0.78
ATG4B-220ENST00000482507 LINC00269Q8N2A0 174 aa10.19□□□□□ -0.78
ATG4B-220ENST00000482507 NANOS2P60321 138 aaKnown RBP10.19□□□□□ -0.78
ATG4B-220ENST00000482507 OBSCN-AS1Q96MR7 158 aa10.18□□□□□ -0.78
ATG4B-220ENST00000482507 IMUPQ9GZP8 106 aa10.18□□□□□ -0.78
ATG4B-220ENST00000482507 IGLV10-54A0A075B6I4 117 aa10.18□□□□□ -0.78
ATG4B-220ENST00000482507 PRB2P02812 416 aaPredicted RBP10.17□□□□□ -0.78
ATG4B-220ENST00000482507 NCR3O14931 201 aa10.17□□□□□ -0.78
ATG4B-220ENST00000482507 DEFB135Q30KP9 77 aa10.17□□□□□ -0.78
ATG4B-220ENST00000482507 SMIM9A6NGZ8 99 aa10.16□□□□□ -0.78
ATG4B-220ENST00000482507 C9orf116Q5BN46 136 aaPredicted RBP10.16□□□□□ -0.78
ATG4B-220ENST00000482507 Q8NDZ9 215 aa10.16□□□□□ -0.78
ATG4B-220ENST00000482507 CHCHD10Q8WYQ3 142 aaPredicted RBP10.16□□□□□ -0.78
ATG4B-220ENST00000482507 WIPF1O43516 503 aa10.15□□□□□ -0.78
ATG4B-220ENST00000482507 CD164L2Q6UWJ8 174 aa10.15□□□□□ -0.79
ATG4B-220ENST00000482507 LINC01561Q8N1V8 128 aa10.14□□□□□ -0.79
ATG4B-220ENST00000482507 KLK5Q9Y337 293 aaPredicted RBP10.14□□□□□ -0.79
ATG4B-220ENST00000482507 LYRM9A8MSI8 78 aa10.14□□□□□ -0.79
ATG4B-220ENST00000482507 CELA1Q9UNI1 258 aa10.14□□□□□ -0.79
ATG4B-220ENST00000482507 ANGP03950 147 aaKnown RBP10.13□□□□□ -0.79
ATG4B-220ENST00000482507 IGHV4-28A0A0C4DH34 117 aa10.13□□□□□ -0.79
ATG4B-220ENST00000482507 REG3AQ06141 175 aa10.13□□□□□ -0.79
ATG4B-220ENST00000482507 LINC00846Q9NV44 126 aa10.13□□□□□ -0.79
ATG4B-220ENST00000482507 IGHV4-30-4P0DP06 118 aa10.11□□□□□ -0.79
ATG4B-220ENST00000482507 CXCL5P42830 114 aa10.11□□□□□ -0.79
ATG4B-220ENST00000482507 EGFEM1PQ0D2K5 195 aa10.11□□□□□ -0.79
ATG4B-220ENST00000482507 LINC00167Q96N53 147 aa10.11□□□□□ -0.79
ATG4B-220ENST00000482507 ORMDL1Q9P0S3 153 aa10.11□□□□□ -0.79
ATG4B-220ENST00000482507 C10orf25Q5T742 122 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms