RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TIMM17AQ99595 171 aa11.19□□□□□ -0.62
CLK1-211ENST00000481641 GEMIN7Q9H840 131 aaKnown RBP11.19□□□□□ -0.62
CLK1-211ENST00000481641 XAGE1AQ9HD64 81 aa11.19□□□□□ -0.62
CLK1-211ENST00000481641 LPAP08519 4548 aa11.18□□□□□ -0.62
CLK1-211ENST00000481641 KRTAP1-4P0C5Y4 121 aa11.18□□□□□ -0.62
CLK1-211ENST00000481641 SCGB3A1Q96QR1 104 aa11.18□□□□□ -0.62
CLK1-211ENST00000481641 TMEM218A2RU14 115 aa11.17□□□□□ -0.62
CLK1-211ENST00000481641 SEC11AP67812 179 aa11.17□□□□□ -0.62
CLK1-211ENST00000481641 PAPPA-AS1Q5QFB9 102 aa11.17□□□□□ -0.62
CLK1-211ENST00000481641 C22orf24Q9Y442 160 aa11.17□□□□□ -0.62
CLK1-211ENST00000481641 G0S2P27469 103 aa11.16□□□□□ -0.62
CLK1-211ENST00000481641 IFITM2Q01629 132 aa11.15□□□□□ -0.62
CLK1-211ENST00000481641 ERASQ7Z444 233 aa11.15□□□□□ -0.62
CLK1-211ENST00000481641 F8VRH5 84 aa11.14□□□□□ -0.63
CLK1-211ENST00000481641 UQCC3Q6UW78 93 aa11.14□□□□□ -0.63
CLK1-211ENST00000481641 TRAV9-1A0A075B6T8 112 aa11.13□□□□□ -0.63
CLK1-211ENST00000481641 SMIM1B2RUZ4 78 aa11.13□□□□□ -0.63
CLK1-211ENST00000481641 IGLV1-50A0A075B6I6 118 aa11.12□□□□□ -0.63
CLK1-211ENST00000481641 TINCRA0A1B0GVN0 87 aa11.11□□□□□ -0.63
CLK1-211ENST00000481641 COX7B2Q8TF08 81 aa11.11□□□□□ -0.63
CLK1-211ENST00000481641 GNB1LQ9BYB4 327 aa11.11□□□□□ -0.63
CLK1-211ENST00000481641 LINC01546A6NGU7 62 aa11.1□□□□□ -0.63
CLK1-211ENST00000481641 ZNF861PO60384 105 aa11.1□□□□□ -0.63
CLK1-211ENST00000481641 SPINK8P0C7L1 97 aa11.1□□□□□ -0.63
CLK1-211ENST00000481641 S100PP25815 95 aa11.1□□□□□ -0.63
CLK1-211ENST00000481641 SEC11CQ9BY50 192 aa11.1□□□□□ -0.63
CLK1-211ENST00000481641 CST9LQ9H4G1 147 aa11.1□□□□□ -0.63
CLK1-211ENST00000481641 IGLV5-45A0A087WSX0 123 aa11.09□□□□□ -0.63
CLK1-211ENST00000481641 CXCL5P42830 114 aa11.09□□□□□ -0.63
CLK1-211ENST00000481641 LBHQ53QV2 105 aaPredicted RBP11.09□□□□□ -0.63
CLK1-211ENST00000481641 PDZD11Q5EBL8 140 aa11.09□□□□□ -0.63
CLK1-211ENST00000481641 NUPR1O60356 82 aa11.08□□□□□ -0.64
CLK1-211ENST00000481641 MRPL55Q7Z7F7 128 aaKnown RBP11.08□□□□□ -0.64
CLK1-211ENST00000481641 RAB5BP61020 215 aa11.07□□□□□ -0.64
CLK1-211ENST00000481641 FABP9Q0Z7S8 132 aa11.07□□□□□ -0.64
CLK1-211ENST00000481641 FA2HQ7L5A8 372 aa11.07□□□□□ -0.64
CLK1-211ENST00000481641 MRPL18Q9H0U6 180 aaKnown RBP11.07□□□□□ -0.64
CLK1-211ENST00000481641 RPL37AP8A6NKH3 93 aa11.06□□□□□ -0.64
CLK1-211ENST00000481641 PMVKQ15126 192 aa11.06□□□□□ -0.64
CLK1-211ENST00000481641 COMMD7Q86VX2 200 aa11.06□□□□□ -0.64
CLK1-211ENST00000481641 LINC00167Q96N53 147 aa11.06□□□□□ -0.64
CLK1-211ENST00000481641 TP73-AS1Q9UF72 201 aa11.06□□□□□ -0.64
CLK1-211ENST00000481641 GAGE10A6NGK3 116 aa11.05□□□□□ -0.64
CLK1-211ENST00000481641 SMCO4Q9NRQ5 59 aa11.05□□□□□ -0.64
CLK1-211ENST00000481641 LINC01549A6NIU2 74 aa11.03□□□□□ -0.64
CLK1-211ENST00000481641 RPL13AP40429 203 aaKnown RBP11.03□□□□□ -0.64
CLK1-211ENST00000481641 RPS10P5Q9NQ39 176 aa11.03□□□□□ -0.64
CLK1-211ENST00000481641 CARHSP1Q9Y2V2 147 aaKnown RBP11.03□□□□□ -0.64
CLK1-211ENST00000481641 BCE1O60756 84 aa11.02□□□□□ -0.65
CLK1-211ENST00000481641 COX19Q49B96 90 aa11.02□□□□□ -0.65
CLK1-211ENST00000481641 A0A096LNJ9 63 aa11.01□□□□□ -0.65
CLK1-211ENST00000481641 NDUFA6P56556 154 aa11.01□□□□□ -0.65
CLK1-211ENST00000481641 C10orf91Q5T1B1 145 aa11.01□□□□□ -0.65
CLK1-211ENST00000481641 URB1-AS1Q96HZ7 61 aa11.01□□□□□ -0.65
CLK1-211ENST00000481641 SCO1O75880 301 aa11□□□□□ -0.65
CLK1-211ENST00000481641 RPL28P46779 137 aaKnown RBP11□□□□□ -0.65
CLK1-211ENST00000481641 A0A087X002 238 aa10.99□□□□□ -0.65
CLK1-211ENST00000481641 H3BRM9 83 aa10.99□□□□□ -0.65
CLK1-211ENST00000481641 IGLC3P0DOY3 106 aa10.99□□□□□ -0.65
CLK1-211ENST00000481641 PRR4Q16378 134 aa10.99□□□□□ -0.65
CLK1-211ENST00000481641 IGLV5-37A0A075B6J1 123 aa10.98□□□□□ -0.65
CLK1-211ENST00000481641 TSPAN13O95857 204 aa10.98□□□□□ -0.65
CLK1-211ENST00000481641 PFN2P35080 140 aa10.98□□□□□ -0.65
CLK1-211ENST00000481641 RHEBQ15382 184 aa10.98□□□□□ -0.65
CLK1-211ENST00000481641 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
CLK1-211ENST00000481641 ANAPC11Q9NYG5 84 aa10.98□□□□□ -0.65
CLK1-211ENST00000481641 ATP5LO75964 103 aa10.97□□□□□ -0.65
CLK1-211ENST00000481641 ZNF22P17026 224 aaPredicted RBP10.97□□□□□ -0.65
CLK1-211ENST00000481641 NKAPP1Q8N9T2 125 aa10.97□□□□□ -0.65
CLK1-211ENST00000481641 C18orf32Q8TCD1 76 aa10.97□□□□□ -0.65
CLK1-211ENST00000481641 IGLV5-39A0A0G2JS06 123 aa10.96□□□□□ -0.65
CLK1-211ENST00000481641 TRAPPC1Q9Y5R8 145 aa10.96□□□□□ -0.65
CLK1-211ENST00000481641 LINC00614P0C842 121 aa10.95□□□□□ -0.66
CLK1-211ENST00000481641 IGKV2-28A0A075B6P5 120 aa10.94□□□□□ -0.66
CLK1-211ENST00000481641 IGKV2D-28P01615 120 aa10.94□□□□□ -0.66
CLK1-211ENST00000481641 ZNF625Q96I27 306 aaPredicted RBP10.94□□□□□ -0.66
CLK1-211ENST00000481641 HBDP02042 147 aa10.93□□□□□ -0.66
CLK1-211ENST00000481641 UBE2AP49459 152 aa10.93□□□□□ -0.66
CLK1-211ENST00000481641 KRTAP13-1Q8IUC0 172 aa10.93□□□□□ -0.66
CLK1-211ENST00000481641 CRYGAP11844 174 aa10.92□□□□□ -0.66
CLK1-211ENST00000481641 TYMSOSQ8TAI1 123 aa10.92□□□□□ -0.66
CLK1-211ENST00000481641 SND1-IT1Q9HBX3 110 aa10.92□□□□□ -0.66
CLK1-211ENST00000481641 ERG28Q9UKR5 140 aa10.92□□□□□ -0.66
CLK1-211ENST00000481641 C11orf86A6NJI1 115 aa10.91□□□□□ -0.66
CLK1-211ENST00000481641 BAGE3Q86Y29 109 aa10.91□□□□□ -0.66
CLK1-211ENST00000481641 VPREB1P12018 145 aa10.9□□□□□ -0.66
CLK1-211ENST00000481641 Q8NDZ9 215 aa10.9□□□□□ -0.66
CLK1-211ENST00000481641 TMEM238C9JI98 176 aa10.89□□□□□ -0.67
CLK1-211ENST00000481641 KRTAP13-2Q52LG2 175 aa10.89□□□□□ -0.67
CLK1-211ENST00000481641 TMEM170BQ5T4T1 132 aa10.89□□□□□ -0.67
CLK1-211ENST00000481641 APOC3P02656 99 aa10.88□□□□□ -0.67
CLK1-211ENST00000481641 PRLHP81277 87 aa10.88□□□□□ -0.67
CLK1-211ENST00000481641 FAM19A1Q7Z5A9 133 aa10.86□□□□□ -0.67
CLK1-211ENST00000481641 COX17Q14061 63 aa10.85□□□□□ -0.67
CLK1-211ENST00000481641 TMEM126AQ9H061 195 aa10.85□□□□□ -0.67
CLK1-211ENST00000481641 RPL24P83731 157 aaKnown RBP10.84□□□□□ -0.67
CLK1-211ENST00000481641 CHTOPQ9Y3Y2 248 aaKnown RBP10.84□□□□□ -0.67
CLK1-211ENST00000481641 A0A0U1RRA0 63 aa10.83□□□□□ -0.68
CLK1-211ENST00000481641 M0R378 163 aa10.83□□□□□ -0.68
CLK1-211ENST00000481641 LINC00158P58513 81 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms