RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 IGLV4-60A0A075B6I1 120 aa12.76□□□□□ -0.37
MRPL28-209ENST00000481453 PAX4O43316 350 aa12.76□□□□□ -0.37
MRPL28-209ENST00000481453 CHCHD5Q9BSY4 110 aa12.76□□□□□ -0.37
MRPL28-209ENST00000481453 TOMM7Q9P0U1 55 aa12.76□□□□□ -0.37
MRPL28-209ENST00000481453 SPART-AS1P0CW21 52 aa12.74□□□□□ -0.37
MRPL28-209ENST00000481453 GAGE2BQ13066 116 aa12.74□□□□□ -0.37
MRPL28-209ENST00000481453 GAGE2EQ4V326 116 aa12.74□□□□□ -0.37
MRPL28-209ENST00000481453 GAGE2DQ9UEU5 116 aa12.74□□□□□ -0.37
MRPL28-209ENST00000481453 PPDPFQ9H3Y8 114 aa12.73□□□□□ -0.37
MRPL28-209ENST00000481453 RETNQ9HD89 108 aa12.73□□□□□ -0.37
MRPL28-209ENST00000481453 A0A096LPF7 62 aa12.73□□□□□ -0.37
MRPL28-209ENST00000481453 ATP5G1P05496 136 aa12.73□□□□□ -0.37
MRPL28-209ENST00000481453 DEFB121Q5J5C9 76 aa12.73□□□□□ -0.37
MRPL28-209ENST00000481453 C15orf53Q8NAA6 179 aa12.72□□□□□ -0.37
MRPL28-209ENST00000481453 MIR7-3HGQ8N6C7 128 aa12.72□□□□□ -0.37
MRPL28-209ENST00000481453 ANAPC13Q9BS18 74 aa12.71□□□□□ -0.37
MRPL28-209ENST00000481453 PKD1L1Q8TDX9 2849 aa12.7□□□□□ -0.38
MRPL28-209ENST00000481453 TRAV26-1A0A087WT03 109 aa12.7□□□□□ -0.38
MRPL28-209ENST00000481453 TRAV13-2A0A0B4J235 113 aa12.7□□□□□ -0.38
MRPL28-209ENST00000481453 IGHV3OR16-9A0A0B4J2B5 98 aa12.7□□□□□ -0.38
MRPL28-209ENST00000481453 FAM240AA0A1B0GVK7 77 aa12.69□□□□□ -0.38
MRPL28-209ENST00000481453 MAST4O15021 2626 aa12.69□□□□□ -0.38
MRPL28-209ENST00000481453 TRACP01848 142 aa12.69□□□□□ -0.38
MRPL28-209ENST00000481453 CRPP02741 224 aa12.69□□□□□ -0.38
MRPL28-209ENST00000481453 LINC00158P58513 81 aa12.69□□□□□ -0.38
MRPL28-209ENST00000481453 SND1-IT1Q9HBX3 110 aa12.68□□□□□ -0.38
MRPL28-209ENST00000481453 DNAH3Q8TD57 4116 aa12.68□□□□□ -0.38
MRPL28-209ENST00000481453 A0A087WZ39 114 aa12.68□□□□□ -0.38
MRPL28-209ENST00000481453 C5orf38Q86SI9 138 aa12.68□□□□□ -0.38
MRPL28-209ENST00000481453 A0A1B0GUV1 79 aa12.66□□□□□ -0.38
MRPL28-209ENST00000481453 HTN3P15516 51 aa12.66□□□□□ -0.38
MRPL28-209ENST00000481453 TTC32Q5I0X7 151 aa12.66□□□□□ -0.38
MRPL28-209ENST00000481453 MRPL23Q16540 153 aaKnown RBP12.66□□□□□ -0.38
MRPL28-209ENST00000481453 Q6Q795 121 aa12.66□□□□□ -0.38
MRPL28-209ENST00000481453 LINC00337Q8N6G1 96 aa12.66□□□□□ -0.38
MRPL28-209ENST00000481453 FAM218AQ96MZ4 157 aa12.66□□□□□ -0.38
MRPL28-209ENST00000481453 IGKV2-28A0A075B6P5 120 aa12.65□□□□□ -0.38
MRPL28-209ENST00000481453 LINC00959A0A1B0GUT2 108 aa12.65□□□□□ -0.38
MRPL28-209ENST00000481453 IGKV2D-28P01615 120 aa12.65□□□□□ -0.38
MRPL28-209ENST00000481453 BAALC-AS2P0C853 105 aa12.65□□□□□ -0.38
MRPL28-209ENST00000481453 RPL28P46779 137 aaKnown RBP12.65□□□□□ -0.38
MRPL28-209ENST00000481453 IBA57-AS1B1ANH7 110 aa12.64□□□□□ -0.39
MRPL28-209ENST00000481453 NDUFV3P56181 108 aaKnown RBP12.64□□□□□ -0.39
MRPL28-209ENST00000481453 PFN2P35080 140 aa12.63□□□□□ -0.39
MRPL28-209ENST00000481453 CCL18P55774 89 aa12.63□□□□□ -0.39
MRPL28-209ENST00000481453 ANK2Q01484 3957 aa12.63□□□□□ -0.39
MRPL28-209ENST00000481453 COL6A5A8TX70 2615 aa12.61□□□□□ -0.39
MRPL28-209ENST00000481453 C6orf226Q5I0X4 101 aa12.61□□□□□ -0.39
MRPL28-209ENST00000481453 Q8N3U1 123 aa12.61□□□□□ -0.39
MRPL28-209ENST00000481453 XCL1P47992 114 aa12.61□□□□□ -0.39
MRPL28-209ENST00000481453 C11orf68Q9H3H3 251 aaKnown RBP12.61□□□□□ -0.39
MRPL28-209ENST00000481453 ACYP1P07311 99 aa12.6□□□□□ -0.39
MRPL28-209ENST00000481453 NHLRC4P0CG21 123 aaPredicted RBP12.6□□□□□ -0.39
MRPL28-209ENST00000481453 Q9HAA7 133 aa12.6□□□□□ -0.39
MRPL28-209ENST00000481453 SS18Q15532 418 aa12.6□□□□□ -0.39
MRPL28-209ENST00000481453 SMIM11BQ8TCY0 68 aa12.6□□□□□ -0.39
MRPL28-209ENST00000481453 CLPSL2Q6UWE3 100 aa12.58□□□□□ -0.39
MRPL28-209ENST00000481453 C22orf24Q9Y442 160 aa12.58□□□□□ -0.4
MRPL28-209ENST00000481453 LELP1Q5T871 98 aa12.57□□□□□ -0.4
MRPL28-209ENST00000481453 MALP21145 153 aa12.56□□□□□ -0.4
MRPL28-209ENST00000481453 Q6ZTC4 211 aa12.56□□□□□ -0.4
MRPL28-209ENST00000481453 DNAL4O96015 105 aa12.56□□□□□ -0.4
MRPL28-209ENST00000481453 PRB2P02812 416 aaPredicted RBP12.56□□□□□ -0.4
MRPL28-209ENST00000481453 LINC00269Q8N2A0 174 aa12.56□□□□□ -0.4
MRPL28-209ENST00000481453 A0A087WYN8 130 aa12.55□□□□□ -0.4
MRPL28-209ENST00000481453 A0A0J9YWU9 116 aa12.55□□□□□ -0.4
MRPL28-209ENST00000481453 OR13C6PQ8NH95 151 aa12.54□□□□□ -0.4
MRPL28-209ENST00000481453 TENM3Q9P273 2699 aa12.54□□□□□ -0.4
MRPL28-209ENST00000481453 H0YGX0 51 aa12.54□□□□□ -0.4
MRPL28-209ENST00000481453 Q8IZM0 81 aa12.54□□□□□ -0.4
MRPL28-209ENST00000481453 INAFM2P0DMQ5 153 aa12.53□□□□□ -0.4
MRPL28-209ENST00000481453 TRBV7-7A0A0K0K1E9 115 aa12.53□□□□□ -0.4
MRPL28-209ENST00000481453 H3BNG1 76 aa12.53□□□□□ -0.4
MRPL28-209ENST00000481453 LYPD5Q6UWN5 251 aa12.53□□□□□ -0.4
MRPL28-209ENST00000481453 ANGP03950 147 aaKnown RBP12.52□□□□□ -0.41
MRPL28-209ENST00000481453 REG3AQ06141 175 aa12.51□□□□□ -0.41
MRPL28-209ENST00000481453 KPRPQ5T749 579 aaPredicted RBP12.51□□□□□ -0.41
MRPL28-209ENST00000481453 SMCR5Q8TEV8 140 aa12.51□□□□□ -0.41
MRPL28-209ENST00000481453 NOTCH1P46531 2555 aa12.5□□□□□ -0.41
MRPL28-209ENST00000481453 K7EIL1 84 aa12.5□□□□□ -0.41
MRPL28-209ENST00000481453 NANOS2P60321 138 aaKnown RBP12.5□□□□□ -0.41
MRPL28-209ENST00000481453 LINC01561Q8N1V8 128 aa12.5□□□□□ -0.41
MRPL28-209ENST00000481453 GAGE2AQ6NT46 116 aa12.49□□□□□ -0.41
MRPL28-209ENST00000481453 LINC00643Q86TS7 51 aa12.49□□□□□ -0.41
MRPL28-209ENST00000481453 LECT2O14960 151 aa12.49□□□□□ -0.41
MRPL28-209ENST00000481453 CHCHD10Q8WYQ3 142 aaPredicted RBP12.49□□□□□ -0.41
MRPL28-209ENST00000481453 B5MCH6 92 aa12.48□□□□□ -0.41
MRPL28-209ENST00000481453 CD164L2Q6UWJ8 174 aa12.48□□□□□ -0.41
MRPL28-209ENST00000481453 CCDC179H3BU77 68 aa12.47□□□□□ -0.41
MRPL28-209ENST00000481453 IGLV10-54A0A075B6I4 117 aa12.47□□□□□ -0.41
MRPL28-209ENST00000481453 C11orf45Q8TAV5 145 aa12.47□□□□□ -0.41
MRPL28-209ENST00000481453 TM2D3Q9BRN9 247 aa12.47□□□□□ -0.41
MRPL28-209ENST00000481453 CFAP161Q6P656 301 aa12.46□□□□□ -0.41
MRPL28-209ENST00000481453 IMUPQ9GZP8 106 aa12.46□□□□□ -0.41
MRPL28-209ENST00000481453 MDFIQ99750 246 aa12.46□□□□□ -0.42
MRPL28-209ENST00000481453 PRR34Q9NV39 138 aa12.46□□□□□ -0.42
MRPL28-209ENST00000481453 SDIM1Q6ZPB5 146 aa12.45□□□□□ -0.42
MRPL28-209ENST00000481453 DEFB131BA0A096LNP1 70 aa12.44□□□□□ -0.42
MRPL28-209ENST00000481453 KIAA0087Q14695 138 aa12.44□□□□□ -0.42
MRPL28-209ENST00000481453 C9orf129Q5T035 196 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms