RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 CXCL5P42830 114 aa5.62□□□□□ -1.51
USP54-212ENST00000480210 SCGB1D4Q6XE38 83 aa5.62□□□□□ -1.51
USP54-212ENST00000480210 WFDC10BQ8IUB3 73 aa5.62□□□□□ -1.51
USP54-212ENST00000480210 ANKRD29Q8N6D5 301 aa5.62□□□□□ -1.51
USP54-212ENST00000480210 CHCHD5Q9BSY4 110 aa5.62□□□□□ -1.51
USP54-212ENST00000480210 SMIM2Q9BVW6 85 aa5.62□□□□□ -1.51
USP54-212ENST00000480210 TRAV8-3A0A0A6YYJ7 113 aa5.61□□□□□ -1.51
USP54-212ENST00000480210 A0A0B4J2C4 111 aa5.61□□□□□ -1.51
USP54-212ENST00000480210 IBA57-AS1B1ANH7 110 aa5.61□□□□□ -1.51
USP54-212ENST00000480210 K7ERJ3 54 aa5.61□□□□□ -1.51
USP54-212ENST00000480210 GAS8-AS1O95177 125 aa5.61□□□□□ -1.51
USP54-212ENST00000480210 C1orf134Q5TEV5 83 aa5.61□□□□□ -1.51
USP54-212ENST00000480210 RMI2Q96E14 147 aa5.61□□□□□ -1.51
USP54-212ENST00000480210 KMT2AQ03164 3969 aa5.61□□□□□ -1.51
USP54-212ENST00000480210 IGLV2-18A0A075B6J9 118 aa5.6□□□□□ -1.51
USP54-212ENST00000480210 IGKV2D-26A0A0A0MRZ7 120 aa5.6□□□□□ -1.51
USP54-212ENST00000480210 TSHBP01222 138 aa5.6□□□□□ -1.51
USP54-212ENST00000480210 LINC00336Q6ZUF6 198 aa5.6□□□□□ -1.51
USP54-212ENST00000480210 C6orf223Q8N319 242 aa5.6□□□□□ -1.51
USP54-212ENST00000480210 CSDC2Q9Y534 153 aaKnown RBP5.6□□□□□ -1.51
USP54-212ENST00000480210 TRBV10-2A0A0K0K1G8 114 aa5.59□□□□□ -1.51
USP54-212ENST00000480210 IGHV3-30P01768 117 aa5.59□□□□□ -1.51
USP54-212ENST00000480210 IGHV3-33P01772 117 aa5.59□□□□□ -1.51
USP54-212ENST00000480210 IGHV3-30-3P0DP02 117 aa5.59□□□□□ -1.51
USP54-212ENST00000480210 IGHV3-30-5P0DP03 117 aa5.59□□□□□ -1.51
USP54-212ENST00000480210 SMCPP49901 116 aaPredicted RBP5.59□□□□□ -1.51
USP54-212ENST00000480210 COPS9Q8WXC6 57 aa5.59□□□□□ -1.51
USP54-212ENST00000480210 UBE2WQ96B02 151 aa5.59□□□□□ -1.51
USP54-212ENST00000480210 CARD19Q96LW7 228 aa5.59□□□□□ -1.51
USP54-212ENST00000480210 TIMM21Q9BVV7 248 aa5.59□□□□□ -1.51
USP54-212ENST00000480210 KMT2CQ8NEZ4 4911 aaKnown RBP5.58□□□□□ -1.52
USP54-212ENST00000480210 TRBV30A0A0K0K1B3 111 aa5.58□□□□□ -1.52
USP54-212ENST00000480210 ZNF815PA8K554 130 aa5.58□□□□□ -1.52
USP54-212ENST00000480210 M0R2N4 97 aa5.58□□□□□ -1.52
USP54-212ENST00000480210 CRPP02741 224 aa5.58□□□□□ -1.52
USP54-212ENST00000480210 ANGP03950 147 aaKnown RBP5.58□□□□□ -1.52
USP54-212ENST00000480210 MIAQ16674 131 aa5.58□□□□□ -1.52
USP54-212ENST00000480210 DGAT2L7PQ6IED9 249 aa5.58□□□□□ -1.52
USP54-212ENST00000480210 C3orf22Q8N5N4 141 aa5.58□□□□□ -1.52
USP54-212ENST00000480210 C20orf203Q8NBC4 194 aa5.58□□□□□ -1.52
USP54-212ENST00000480210 LINC00526Q96FQ7 95 aa5.58□□□□□ -1.52
USP54-212ENST00000480210 TMEM141Q96I45 108 aa5.58□□□□□ -1.52
USP54-212ENST00000480210 MRPL35Q9NZE8 188 aaKnown RBP5.58□□□□□ -1.52
USP54-212ENST00000480210 HYDINQ4G0P3 5121 aa5.58□□□□□ -1.52
USP54-212ENST00000480210 TOMM6Q96B49 74 aa5.57□□□□□ -1.52
USP54-212ENST00000480210 SCGB3A1Q96QR1 104 aa5.57□□□□□ -1.52
USP54-212ENST00000480210 PRR34Q9NV39 138 aa5.57□□□□□ -1.52
USP54-212ENST00000480210 KLK12Q9UKR0 248 aa5.57□□□□□ -1.52
USP54-212ENST00000480210 PYGO1Q9Y3Y4 419 aa5.57□□□□□ -1.52
USP54-212ENST00000480210 CCDC179H3BU77 68 aa5.56□□□□□ -1.52
USP54-212ENST00000480210 ATOX1O00244 68 aa5.56□□□□□ -1.52
USP54-212ENST00000480210 TCL1BO95988 128 aa5.56□□□□□ -1.52
USP54-212ENST00000480210 CFC1BP0CG36 223 aa5.56□□□□□ -1.52
USP54-212ENST00000480210 CFC1P0CG37 223 aa5.56□□□□□ -1.52
USP54-212ENST00000480210 TMEM258P61165 79 aa5.56□□□□□ -1.52
USP54-212ENST00000480210 C9orf153Q5TBE3 101 aa5.56□□□□□ -1.52
USP54-212ENST00000480210 LINC00643Q86TS7 51 aa5.56□□□□□ -1.52
USP54-212ENST00000480210 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.55□□□□□ -1.52
USP54-212ENST00000480210 IGKV2-29A2NJV5 120 aaPredicted RBP5.55□□□□□ -1.52
USP54-212ENST00000480210 C11orf86A6NJI1 115 aa5.55□□□□□ -1.52
USP54-212ENST00000480210 C9JAW5 83 aa5.55□□□□□ -1.52
USP54-212ENST00000480210 MRPS36P82909 103 aaKnown RBP5.55□□□□□ -1.52
USP54-212ENST00000480210 REG3AQ06141 175 aa5.55□□□□□ -1.52
USP54-212ENST00000480210 LINC01620Q4KN68 170 aa5.55□□□□□ -1.52
USP54-212ENST00000480210 MAPKAPK5-AS1Q8N8E1 139 aa5.55□□□□□ -1.52
USP54-212ENST00000480210 PLEKHB2Q96CS7 222 aa5.55□□□□□ -1.52
USP54-212ENST00000480210 C1orf43Q9BWL3 253 aa5.55□□□□□ -1.52
USP54-212ENST00000480210 KRTAP1-5Q9BYS1 174 aa5.55□□□□□ -1.52
USP54-212ENST00000480210 CDC42SE2Q9NRR3 84 aa5.55□□□□□ -1.52
USP54-212ENST00000480210 UBE2D4Q9Y2X8 147 aa5.55□□□□□ -1.52
USP54-212ENST00000480210 RYR2Q92736 4967 aa5.55□□□□□ -1.52
USP54-212ENST00000480210 IGLV4-60A0A075B6I1 120 aa5.54□□□□□ -1.52
USP54-212ENST00000480210 NDUFC2-KCTD14E9PQ53 114 aa5.54□□□□□ -1.52
USP54-212ENST00000480210 PSCAO43653 123 aa5.54□□□□□ -1.52
USP54-212ENST00000480210 CRYGAP11844 174 aa5.54□□□□□ -1.52
USP54-212ENST00000480210 ENHOQ6UWT2 76 aa5.54□□□□□ -1.52
USP54-212ENST00000480210 C2orf66Q6UXQ4 117 aa5.54□□□□□ -1.52
USP54-212ENST00000480210 LINC00269Q8N2A0 174 aa5.54□□□□□ -1.52
USP54-212ENST00000480210 RTL8CO15255 209 aa5.53□□□□□ -1.52
USP54-212ENST00000480210 INAFM2P0DMQ5 153 aa5.53□□□□□ -1.52
USP54-212ENST00000480210 LGALS3P17931 250 aaKnown RBP5.53□□□□□ -1.52
USP54-212ENST00000480210 SS18Q15532 418 aa5.53□□□□□ -1.52
USP54-212ENST00000480210 C2orf82Q6UX34 121 aa5.53□□□□□ -1.52
USP54-212ENST00000480210 Q6ZRN7 208 aaPredicted RBP5.53□□□□□ -1.52
USP54-212ENST00000480210 DEFB104AQ8WTQ1 72 aa5.53□□□□□ -1.52
USP54-212ENST00000480210 TIMM17AQ99595 171 aa5.53□□□□□ -1.52
USP54-212ENST00000480210 IGKV2D-24A0A075B6R9 120 aa5.52□□□□□ -1.53
USP54-212ENST00000480210 COX7CP15954 63 aa5.52□□□□□ -1.53
USP54-212ENST00000480210 C14orf177Q52M58 125 aa5.52□□□□□ -1.53
USP54-212ENST00000480210 GAGE2AQ6NT46 116 aa5.52□□□□□ -1.53
USP54-212ENST00000480210 NTN5Q8WTR8 489 aaPredicted RBP5.52□□□□□ -1.53
USP54-212ENST00000480210 Q9HAA7 133 aa5.52□□□□□ -1.53
USP54-212ENST00000480210 LINC00959A0A1B0GUT2 108 aa5.51□□□□□ -1.53
USP54-212ENST00000480210 TRACP01848 142 aa5.51□□□□□ -1.53
USP54-212ENST00000480210 RPL39P62891 51 aaKnown RBP5.51□□□□□ -1.53
USP54-212ENST00000480210 Q1RN00 199 aa5.51□□□□□ -1.53
USP54-212ENST00000480210 Q8N3U1 123 aa5.51□□□□□ -1.53
USP54-212ENST00000480210 BAALCQ8WXS3 180 aa5.51□□□□□ -1.53
USP54-212ENST00000480210 A0A0J9YXY3 114 aa5.5□□□□□ -1.53
USP54-212ENST00000480210 IGIPA6NJ69 53 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms