RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 SERP2Q8N6R1 65 aa13.46□□□□□ -0.26
TNFRSF8-204ENST00000479933 ZNF625Q96I27 306 aaPredicted RBP13.46□□□□□ -0.26
TNFRSF8-204ENST00000479933 PRIMA1Q86XR5 153 aa13.45□□□□□ -0.26
TNFRSF8-204ENST00000479933 LINC00308Q8TCZ7 52 aa13.45□□□□□ -0.26
TNFRSF8-204ENST00000479933 C22orf24Q9Y442 160 aa13.45□□□□□ -0.26
TNFRSF8-204ENST00000479933 MRAPQ8TCY5 172 aa13.45□□□□□ -0.26
TNFRSF8-204ENST00000479933 HIVEP2P31629 2446 aa13.45□□□□□ -0.26
TNFRSF8-204ENST00000479933 C9orf66Q5T8R8 295 aa13.43□□□□□ -0.26
TNFRSF8-204ENST00000479933 JMJD1CQ15652 2540 aa13.43□□□□□ -0.26
TNFRSF8-204ENST00000479933 BAALC-AS2P0C853 105 aa13.43□□□□□ -0.26
TNFRSF8-204ENST00000479933 HELZ2Q9BYK8 2649 aaKnown RBP13.42□□□□□ -0.26
TNFRSF8-204ENST00000479933 Q6JHZ5 121 aa13.42□□□□□ -0.26
TNFRSF8-204ENST00000479933 CYSTM1Q9H1C7 97 aa13.42□□□□□ -0.26
TNFRSF8-204ENST00000479933 CUBNO60494 3623 aa13.42□□□□□ -0.26
TNFRSF8-204ENST00000479933 DEFB130BP0DP73 79 aa13.41□□□□□ -0.26
TNFRSF8-204ENST00000479933 DEFB130AP0DP74 79 aa13.41□□□□□ -0.26
TNFRSF8-204ENST00000479933 NOTCH3Q9UM47 2321 aa13.4□□□□□ -0.26
TNFRSF8-204ENST00000479933 Q5XG85 94 aa13.4□□□□□ -0.26
TNFRSF8-204ENST00000479933 OXTP01178 125 aa13.39□□□□□ -0.27
TNFRSF8-204ENST00000479933 X6R8D5 127 aa13.39□□□□□ -0.27
TNFRSF8-204ENST00000479933 NDUFC2-KCTD14E9PQ53 114 aa13.38□□□□□ -0.27
TNFRSF8-204ENST00000479933 COX7B2Q8TF08 81 aa13.38□□□□□ -0.27
TNFRSF8-204ENST00000479933 IGLV4-60A0A075B6I1 120 aa13.37□□□□□ -0.27
TNFRSF8-204ENST00000479933 LYRM9A8MSI8 78 aa13.36□□□□□ -0.27
TNFRSF8-204ENST00000479933 PRO0255Q9UI72 69 aa13.36□□□□□ -0.27
TNFRSF8-204ENST00000479933 GYPEP15421 78 aa13.36□□□□□ -0.27
TNFRSF8-204ENST00000479933 NIPBLQ6KC79 2804 aaeCLIP13.34□□□□□ -0.27
TNFRSF8-204ENST00000479933 IGHV3OR16-9A0A0B4J2B5 98 aa13.34□□□□□ -0.27
TNFRSF8-204ENST00000479933 A0A0U1RRA0 63 aa13.34□□□□□ -0.27
TNFRSF8-204ENST00000479933 FASNP49327 2511 aaKnown RBP13.34□□□□□ -0.27
TNFRSF8-204ENST00000479933 INAFM1C9JVW0 142 aa13.34□□□□□ -0.27
TNFRSF8-204ENST00000479933 MALP21145 153 aa13.34□□□□□ -0.27
TNFRSF8-204ENST00000479933 SOSTDC1Q6X4U4 206 aa13.34□□□□□ -0.27
TNFRSF8-204ENST00000479933 A0A087WZ39 114 aa13.33□□□□□ -0.28
TNFRSF8-204ENST00000479933 APOC4P55056 127 aa13.33□□□□□ -0.28
TNFRSF8-204ENST00000479933 C4orf26Q17RF5 130 aa13.33□□□□□ -0.28
TNFRSF8-204ENST00000479933 DSCR8Q96T75 97 aa13.33□□□□□ -0.28
TNFRSF8-204ENST00000479933 IGKV3OR2-268A0A0C4DH90 116 aa13.33□□□□□ -0.28
TNFRSF8-204ENST00000479933 A0A1B0GUV1 79 aa13.33□□□□□ -0.28
TNFRSF8-204ENST00000479933 OBSCN-AS1Q96MR7 158 aa13.33□□□□□ -0.28
TNFRSF8-204ENST00000479933 DNAL4O96015 105 aa13.32□□□□□ -0.28
TNFRSF8-204ENST00000479933 LINC00959A0A1B0GUT2 108 aa13.31□□□□□ -0.28
TNFRSF8-204ENST00000479933 FAM218AQ96MZ4 157 aa13.31□□□□□ -0.28
TNFRSF8-204ENST00000479933 NDUFC2O95298 119 aa13.3□□□□□ -0.28
TNFRSF8-204ENST00000479933 HRCT1Q6UXD1 115 aa13.3□□□□□ -0.28
TNFRSF8-204ENST00000479933 TOMM7Q9P0U1 55 aa13.3□□□□□ -0.28
TNFRSF8-204ENST00000479933 C2CD3Q4AC94 2353 aa13.3□□□□□ -0.28
TNFRSF8-204ENST00000479933 USP17L23D6RBM5 183 aa13.3□□□□□ -0.28
TNFRSF8-204ENST00000479933 PAX4O43316 350 aa13.29□□□□□ -0.28
TNFRSF8-204ENST00000479933 SS18Q15532 418 aa13.29□□□□□ -0.28
TNFRSF8-204ENST00000479933 RPL28P46779 137 aaKnown RBP13.28□□□□□ -0.28
TNFRSF8-204ENST00000479933 LINC01561Q8N1V8 128 aa13.28□□□□□ -0.28
TNFRSF8-204ENST00000479933 TRAV13-2A0A0B4J235 113 aa13.28□□□□□ -0.28
TNFRSF8-204ENST00000479933 IBA57-AS1B1ANH7 110 aa13.28□□□□□ -0.28
TNFRSF8-204ENST00000479933 EPM2AB3EWF7 344 aa13.27□□□□□ -0.29
TNFRSF8-204ENST00000479933 DEFB135Q30KP9 77 aa13.26□□□□□ -0.29
TNFRSF8-204ENST00000479933 MIR7-3HGQ8N6C7 128 aa13.26□□□□□ -0.29
TNFRSF8-204ENST00000479933 SPATA3Q8NHX4 192 aa13.26□□□□□ -0.29
TNFRSF8-204ENST00000479933 LINC00158P58513 81 aa13.25□□□□□ -0.29
TNFRSF8-204ENST00000479933 CRPP02741 224 aa13.24□□□□□ -0.29
TNFRSF8-204ENST00000479933 MIFP14174 115 aa13.24□□□□□ -0.29
TNFRSF8-204ENST00000479933 LINC00846Q9NV44 126 aa13.24□□□□□ -0.29
TNFRSF8-204ENST00000479933 IGHV4-28A0A0C4DH34 117 aa13.23□□□□□ -0.29
TNFRSF8-204ENST00000479933 IGKV3D-7A0A0C4DH55 119 aa13.23□□□□□ -0.29
TNFRSF8-204ENST00000479933 DAD1P61803 113 aa13.23□□□□□ -0.29
TNFRSF8-204ENST00000479933 SND1-IT1Q9HBX3 110 aa13.23□□□□□ -0.29
TNFRSF8-204ENST00000479933 ATP5EP2Q5VTU8 51 aa13.22□□□□□ -0.29
TNFRSF8-204ENST00000479933 PRO0628Q9UI54 55 aa13.22□□□□□ -0.29
TNFRSF8-204ENST00000479933 C6orf226Q5I0X4 101 aa13.22□□□□□ -0.29
TNFRSF8-204ENST00000479933 XCL1P47992 114 aa13.21□□□□□ -0.3
TNFRSF8-204ENST00000479933 Q8IZM0 81 aa13.21□□□□□ -0.3
TNFRSF8-204ENST00000479933 GCN1Q92616 2671 aaKnown RBP13.2□□□□□ -0.3
TNFRSF8-204ENST00000479933 WFDC9Q8NEX5 89 aa13.2□□□□□ -0.3
TNFRSF8-204ENST00000479933 Q9HAA7 133 aa13.2□□□□□ -0.3
TNFRSF8-204ENST00000479933 A0A087WVE0 104 aa13.19□□□□□ -0.3
TNFRSF8-204ENST00000479933 FN1P02751 2386 aaKnown RBP13.19□□□□□ -0.3
TNFRSF8-204ENST00000479933 S100A7L2Q5SY68 101 aa13.19□□□□□ -0.3
TNFRSF8-204ENST00000479933 C14orf132Q9NPU4 83 aa13.19□□□□□ -0.3
TNFRSF8-204ENST00000479933 A0A096LPF7 62 aa13.18□□□□□ -0.3
TNFRSF8-204ENST00000479933 Q8NAQ8 132 aa13.18□□□□□ -0.3
TNFRSF8-204ENST00000479933 H0YGX0 51 aa13.18□□□□□ -0.3
TNFRSF8-204ENST00000479933 DEFB4AO15263 64 aa13.18□□□□□ -0.3
TNFRSF8-204ENST00000479933 CCL18P55774 89 aa13.18□□□□□ -0.3
TNFRSF8-204ENST00000479933 SPART-AS1P0CW21 52 aa13.17□□□□□ -0.3
TNFRSF8-204ENST00000479933 PFN2P35080 140 aa13.17□□□□□ -0.3
TNFRSF8-204ENST00000479933 IGKV2-28A0A075B6P5 120 aa13.16□□□□□ -0.3
TNFRSF8-204ENST00000479933 IGKV2D-28P01615 120 aa13.16□□□□□ -0.3
TNFRSF8-204ENST00000479933 CD164L2Q6UWJ8 174 aa13.16□□□□□ -0.3
TNFRSF8-204ENST00000479933 LINC00337Q8N6G1 96 aa13.16□□□□□ -0.3
TNFRSF8-204ENST00000479933 SERP1Q9Y6X1 66 aa13.16□□□□□ -0.3
TNFRSF8-204ENST00000479933 HECTD1Q9ULT8 2610 aa13.16□□□□□ -0.3
TNFRSF8-204ENST00000479933 NSD1Q96L73 2696 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF8-204ENST00000479933 OTOGQ6ZRI0 2925 aa13.15□□□□□ -0.3
TNFRSF8-204ENST00000479933 FAM236DA0A1B0GTK5 79 aa13.15□□□□□ -0.3
TNFRSF8-204ENST00000479933 BCE1O60756 84 aa13.15□□□□□ -0.3
TNFRSF8-204ENST00000479933 FAM236CP0DP71 79 aa13.15□□□□□ -0.3
TNFRSF8-204ENST00000479933 C9orf129Q5T035 196 aaKnown RBP13.15□□□□□ -0.3
TNFRSF8-204ENST00000479933 LINC00269Q8N2A0 174 aa13.15□□□□□ -0.3
TNFRSF8-204ENST00000479933 CLPSL2Q6UWE3 100 aa13.14□□□□□ -0.31
TNFRSF8-204ENST00000479933 TRBV10-3A0A0K0K1G6 114 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms