RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 TP73-AS1Q9UF72 201 aa5.48□□□□□ -1.53
GPNMB-211ENST00000479625 PPP1R2P9O14990 202 aa5.47□□□□□ -1.53
GPNMB-211ENST00000479625 UBE2AP49459 152 aa5.47□□□□□ -1.53
GPNMB-211ENST00000479625 MT1HP80294 61 aa5.47□□□□□ -1.53
GPNMB-211ENST00000479625 MRPL51Q4U2R6 128 aaKnown RBP5.47□□□□□ -1.53
GPNMB-211ENST00000479625 TOMM7Q9P0U1 55 aa5.47□□□□□ -1.53
GPNMB-211ENST00000479625 TCAPO15273 167 aa5.46□□□□□ -1.54
GPNMB-211ENST00000479625 PRLHP81277 87 aa5.46□□□□□ -1.54
GPNMB-211ENST00000479625 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
GPNMB-211ENST00000479625 IGLV4-3A0A075B6K6 122 aa5.45□□□□□ -1.54
GPNMB-211ENST00000479625 HMSDA8MTL9 139 aa5.45□□□□□ -1.54
GPNMB-211ENST00000479625 PPP1R17O96001 155 aa5.45□□□□□ -1.54
GPNMB-211ENST00000479625 PRSS2P07478 247 aa5.45□□□□□ -1.54
GPNMB-211ENST00000479625 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
GPNMB-211ENST00000479625 CKS1BP61024 79 aa5.45□□□□□ -1.54
GPNMB-211ENST00000479625 RPL32P62910 135 aaKnown RBP5.45□□□□□ -1.54
GPNMB-211ENST00000479625 ZC2HC1BQ5TFG8 222 aa5.45□□□□□ -1.54
GPNMB-211ENST00000479625 FP248Q71RG6 208 aaPredicted RBP5.45□□□□□ -1.54
GPNMB-211ENST00000479625 SMIM2Q9BVW6 85 aa5.45□□□□□ -1.54
GPNMB-211ENST00000479625 SCO1O75880 301 aa5.44□□□□□ -1.54
GPNMB-211ENST00000479625 CEBPGP53567 150 aa5.44□□□□□ -1.54
GPNMB-211ENST00000479625 PNRC1Q12796 327 aaPredicted RBP5.44□□□□□ -1.54
GPNMB-211ENST00000479625 IGKV2-28A0A075B6P5 120 aa5.43□□□□□ -1.54
GPNMB-211ENST00000479625 TNFRSF6BO95407 300 aa5.43□□□□□ -1.54
GPNMB-211ENST00000479625 IGKV2D-28P01615 120 aa5.43□□□□□ -1.54
GPNMB-211ENST00000479625 IFI27P40305 119 aaPredicted RBP5.43□□□□□ -1.54
GPNMB-211ENST00000479625 CTAG1AP78358 180 aa5.43□□□□□ -1.54
GPNMB-211ENST00000479625 RIGQ13278 110 aa5.43□□□□□ -1.54
GPNMB-211ENST00000479625 FAM104BQ5XKR9 115 aa5.43□□□□□ -1.54
GPNMB-211ENST00000479625 C20orf78Q9BR46 151 aa5.43□□□□□ -1.54
GPNMB-211ENST00000479625 TRBV24-1A0A075B6N3 115 aa5.42□□□□□ -1.54
GPNMB-211ENST00000479625 NPYP01303 97 aa5.42□□□□□ -1.54
GPNMB-211ENST00000479625 C6orf226Q5I0X4 101 aa5.42□□□□□ -1.54
GPNMB-211ENST00000479625 Q8IZM0 81 aa5.42□□□□□ -1.54
GPNMB-211ENST00000479625 LINC01561Q8N1V8 128 aa5.42□□□□□ -1.54
GPNMB-211ENST00000479625 ALKBH7Q9BT30 221 aaPredicted RBP5.42□□□□□ -1.54
GPNMB-211ENST00000479625 F8VRH5 84 aa5.41□□□□□ -1.54
GPNMB-211ENST00000479625 CFC1BP0CG36 223 aa5.41□□□□□ -1.54
GPNMB-211ENST00000479625 CKS2P33552 79 aa5.41□□□□□ -1.54
GPNMB-211ENST00000479625 KRTAP10-6P60371 365 aaPredicted RBP5.41□□□□□ -1.54
GPNMB-211ENST00000479625 Q6ZN92 141 aa5.41□□□□□ -1.54
GPNMB-211ENST00000479625 LINC01551Q86U37 167 aa5.41□□□□□ -1.54
GPNMB-211ENST00000479625 TMEM141Q96I45 108 aa5.41□□□□□ -1.54
GPNMB-211ENST00000479625 EIF5A2Q9GZV4 153 aaKnown RBP5.41□□□□□ -1.54
GPNMB-211ENST00000479625 V9GYV3 84 aa5.41□□□□□ -1.54
GPNMB-211ENST00000479625 TMEM238C9JI98 176 aa5.4□□□□□ -1.54
GPNMB-211ENST00000479625 D6R8Y8 96 aa5.4□□□□□ -1.54
GPNMB-211ENST00000479625 TMEM250H0YL14 139 aa5.4□□□□□ -1.54
GPNMB-211ENST00000479625 TAGLN2P37802 199 aaKnown RBP5.4□□□□□ -1.54
GPNMB-211ENST00000479625 SPAG11AQ6PDA7 123 aa5.4□□□□□ -1.54
GPNMB-211ENST00000479625 TEX43Q6ZNM6 134 aa5.4□□□□□ -1.54
GPNMB-211ENST00000479625 FAM19A1Q7Z5A9 133 aa5.4□□□□□ -1.54
GPNMB-211ENST00000479625 DAND5Q8N907 189 aa5.4□□□□□ -1.54
GPNMB-211ENST00000479625 BATF3Q9NR55 127 aa5.4□□□□□ -1.54
GPNMB-211ENST00000479625 FLGP20930 4061 aaPredicted RBP5.4□□□□□ -1.55
GPNMB-211ENST00000479625 SSPOA2VEC9 5147 aa5.4□□□□□ -1.55
GPNMB-211ENST00000479625 USH2AO75445 5202 aa5.4□□□□□ -1.55
GPNMB-211ENST00000479625 IGLV5-37A0A075B6J1 123 aa5.39□□□□□ -1.55
GPNMB-211ENST00000479625 LINC00862A6NCI5 91 aa5.39□□□□□ -1.55
GPNMB-211ENST00000479625 BLOC1S1P78537 153 aa5.39□□□□□ -1.55
GPNMB-211ENST00000479625 NKAPP1Q8N9T2 125 aa5.39□□□□□ -1.55
GPNMB-211ENST00000479625 PLEKHB2Q96CS7 222 aa5.39□□□□□ -1.55
GPNMB-211ENST00000479625 SMIM7Q9BQ49 75 aa5.39□□□□□ -1.55
GPNMB-211ENST00000479625 OSTCQ9NRP0 149 aa5.39□□□□□ -1.55
GPNMB-211ENST00000479625 PYGO1Q9Y3Y4 419 aa5.39□□□□□ -1.55
GPNMB-211ENST00000479625 Q8NBF4 154 aa5.38□□□□□ -1.55
GPNMB-211ENST00000479625 C2orf88Q9BSF0 95 aa5.38□□□□□ -1.55
GPNMB-211ENST00000479625 TMEM126AQ9H061 195 aa5.38□□□□□ -1.55
GPNMB-211ENST00000479625 CDKN2A-AS1Q9UH64 79 aa5.38□□□□□ -1.55
GPNMB-211ENST00000479625 NAT8BQ9UHF3 227 aa5.37□□□□□ -1.55
GPNMB-211ENST00000479625 RAB5BP61020 215 aa5.36□□□□□ -1.55
GPNMB-211ENST00000479625 FAM74A3Q4VXF1 159 aa5.36□□□□□ -1.55
GPNMB-211ENST00000479625 CBLN2Q8IUK8 224 aa5.36□□□□□ -1.55
GPNMB-211ENST00000479625 AMELXQ99217 191 aa5.36□□□□□ -1.55
GPNMB-211ENST00000479625 HIGD2AQ9BW72 106 aa5.36□□□□□ -1.55
GPNMB-211ENST00000479625 M0R378 163 aa5.35□□□□□ -1.55
GPNMB-211ENST00000479625 RAB5AP20339 215 aa5.35□□□□□ -1.55
GPNMB-211ENST00000479625 MRPL54Q6P161 138 aaKnown RBP5.35□□□□□ -1.55
GPNMB-211ENST00000479625 SPRR4Q96PI1 79 aa5.35□□□□□ -1.55
GPNMB-211ENST00000479625 CXCL5P42830 114 aa5.34□□□□□ -1.55
GPNMB-211ENST00000479625 RGS21Q2M5E4 152 aa5.34□□□□□ -1.55
GPNMB-211ENST00000479625 C2orf66Q6UXQ4 117 aa5.34□□□□□ -1.55
GPNMB-211ENST00000479625 FAM19A3Q7Z5A8 133 aa5.34□□□□□ -1.55
GPNMB-211ENST00000479625 VCX2Q9H322 139 aa5.34□□□□□ -1.55
GPNMB-211ENST00000479625 LOC389332A0A1B0GUA5 103 aa5.33□□□□□ -1.56
GPNMB-211ENST00000479625 SMIM27A0A1W2PRY6 76 aa5.33□□□□□ -1.56
GPNMB-211ENST00000479625 SMIM1B2RUZ4 78 aa5.33□□□□□ -1.56
GPNMB-211ENST00000479625 HERVK_113P63121 156 aa5.33□□□□□ -1.56
GPNMB-211ENST00000479625 CYSLTR1Q9Y271 337 aa5.33□□□□□ -1.56
GPNMB-211ENST00000479625 A0A1B0GXF2 115 aa5.32□□□□□ -1.56
GPNMB-211ENST00000479625 VPREB1P12018 145 aa5.32□□□□□ -1.56
GPNMB-211ENST00000479625 SLC51BQ86UW2 128 aa5.32□□□□□ -1.56
GPNMB-211ENST00000479625 ORMDL3Q8N138 153 aa5.32□□□□□ -1.56
GPNMB-211ENST00000479625 Q8N377 158 aa5.32□□□□□ -1.56
GPNMB-211ENST00000479625 Q8NDZ9 215 aa5.32□□□□□ -1.56
GPNMB-211ENST00000479625 COX7B2Q8TF08 81 aa5.32□□□□□ -1.56
GPNMB-211ENST00000479625 PRELID3AQ96N28 172 aa5.32□□□□□ -1.56
GPNMB-211ENST00000479625 IGLV8-61A0A075B6I0 122 aa5.31□□□□□ -1.56
GPNMB-211ENST00000479625 A0A1B0GVG6 124 aa5.31□□□□□ -1.56
GPNMB-211ENST00000479625 A0A1B0GW15 77 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms