RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 SPANXB1Q9NS25 103 aaPredicted RBP2.83□□□□□ -1.96
USP25-208ENST00000478932 FBN3Q75N90 2809 aa2.83□□□□□ -1.96
USP25-208ENST00000478932 NDUFA1O15239 70 aa2.83□□□□□ -1.96
USP25-208ENST00000478932 REG3AQ06141 175 aa2.83□□□□□ -1.96
USP25-208ENST00000478932 KPRPQ5T749 579 aaPredicted RBP2.83□□□□□ -1.96
USP25-208ENST00000478932 LYPD5Q6UWN5 251 aa2.83□□□□□ -1.96
USP25-208ENST00000478932 FAM19A3Q7Z5A8 133 aa2.83□□□□□ -1.96
USP25-208ENST00000478932 MTURNQ8N3F0 131 aa2.83□□□□□ -1.96
USP25-208ENST00000478932 C11orf68Q9H3H3 251 aaKnown RBP2.83□□□□□ -1.96
USP25-208ENST00000478932 PRO1854Q9UHT4 67 aa2.83□□□□□ -1.96
USP25-208ENST00000478932 KLK12Q9UKR0 248 aa2.83□□□□□ -1.96
USP25-208ENST00000478932 ICOSQ9Y6W8 199 aa2.83□□□□□ -1.96
USP25-208ENST00000478932 A0A087WZ39 114 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 K7EIL1 84 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 GHRHP01286 108 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 RPL24P83731 157 aaKnown RBP2.82□□□□□ -1.96
USP25-208ENST00000478932 C6orf226Q5I0X4 101 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 C2orf82Q6UX34 121 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 GTF2H5Q6ZYL4 71 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 C11orf45Q8TAV5 145 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 DNAH3Q8TD57 4116 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 DEFB131BA0A096LNP1 70 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 K7EP34 96 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 TSPAN13O95857 204 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 IGHV3-33P01772 117 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 CIRBPQ14011 172 aaKnown RBP2.82□□□□□ -1.96
USP25-208ENST00000478932 SS18Q15532 418 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 MIAQ16674 131 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 KRTAP21-3Q3LHN1 58 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 MEIG1Q5JSS6 88 aa2.82□□□□□ -1.96
USP25-208ENST00000478932 PFN2P35080 140 aa2.81□□□□□ -1.96
USP25-208ENST00000478932 LELP1Q5T871 98 aa2.81□□□□□ -1.96
USP25-208ENST00000478932 WFDC10BQ8IUB3 73 aa2.81□□□□□ -1.96
USP25-208ENST00000478932 COX7B2Q8TF08 81 aa2.81□□□□□ -1.96
USP25-208ENST00000478932 CHCHD10Q8WYQ3 142 aaPredicted RBP2.81□□□□□ -1.96
USP25-208ENST00000478932 LINC00526Q96FQ7 95 aa2.81□□□□□ -1.96
USP25-208ENST00000478932 PRKDCP78527 4128 aaKnown RBP2.81□□□□□ -1.96
USP25-208ENST00000478932 TEX48A0A1B0GUV7 120 aa2.81□□□□□ -1.96
USP25-208ENST00000478932 ESRGQ1W209 222 aa2.81□□□□□ -1.96
USP25-208ENST00000478932 SOSTDC1Q6X4U4 206 aa2.81□□□□□ -1.96
USP25-208ENST00000478932 LINC00308Q8TCZ7 52 aa2.81□□□□□ -1.96
USP25-208ENST00000478932 UBE2WQ96B02 151 aa2.81□□□□□ -1.96
USP25-208ENST00000478932 SCGB1C2P0DMR2 95 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 PSMB2P49721 201 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 LINC00158P58513 81 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 WFDC2Q14508 124 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 CD164L2Q6UWJ8 174 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 ENHOQ6UWT2 76 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 SH2D6Q7Z4S9 175 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 MIR7-3HGQ8N6C7 128 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 SPANXDQ9BXN6 97 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 SPANXCQ9NY87 97 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 ERG28Q9UKR5 140 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 HUWE1Q7Z6Z7 4374 aaKnown RBP2.8□□□□□ -1.96
USP25-208ENST00000478932 COX7A2LO14548 114 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 TIMM17BO60830 172 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 MALP21145 153 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 Q1RN00 199 aa2.8□□□□□ -1.96
USP25-208ENST00000478932 C9orf116Q5BN46 136 aaPredicted RBP2.8□□□□□ -1.96
USP25-208ENST00000478932 SRRM2Q9UQ35 2752 aaKnown RBP2.8□□□□□ -1.96
USP25-208ENST00000478932 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.79□□□□□ -1.96
USP25-208ENST00000478932 A0A0B4J2C4 111 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 CKS1BP61024 79 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 HERV-K104P63124 156 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 SPATA25Q9BR10 227 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 TM2D3Q9BRN9 247 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 PRR34Q9NV39 138 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 GAGE12HA6NDE8 117 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 H3BNG1 76 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 TCL1BO95988 128 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 IFITM1P13164 125 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 FOXI1Q12951 378 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 KIAA0087Q14695 138 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 ETDBQ3ZM63 59 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 C6orf223Q8N319 242 aa2.79□□□□□ -1.96
USP25-208ENST00000478932 TRIAP1O43715 76 aa2.78□□□□□ -1.96
USP25-208ENST00000478932 PRR3P79522 188 aaKnown RBP2.78□□□□□ -1.96
USP25-208ENST00000478932 OCIAD2Q56VL3 154 aa2.78□□□□□ -1.96
USP25-208ENST00000478932 C10orf25Q5T742 122 aa2.78□□□□□ -1.96
USP25-208ENST00000478932 DNAH7Q8WXX0 4024 aa2.78□□□□□ -1.96
USP25-208ENST00000478932 IBA57-AS1B1ANH7 110 aa2.78□□□□□ -1.96
USP25-208ENST00000478932 F8W1H4 67 aa2.78□□□□□ -1.96
USP25-208ENST00000478932 RPL13AP40429 203 aaKnown RBP2.78□□□□□ -1.96
USP25-208ENST00000478932 CCL18P55774 89 aa2.78□□□□□ -1.96
USP25-208ENST00000478932 UNQ6190/PRO20217Q6UXQ8 127 aa2.78□□□□□ -1.96
USP25-208ENST00000478932 Q8IZM0 81 aa2.78□□□□□ -1.96
USP25-208ENST00000478932 SND1-IT1Q9HBX3 110 aa2.78□□□□□ -1.96
USP25-208ENST00000478932 CRPP02741 224 aa2.77□□□□□ -1.97
USP25-208ENST00000478932 PRO0461Q9UI25 63 aa2.77□□□□□ -1.97
USP25-208ENST00000478932 TRBV20-1A0A075B6N2 111 aa2.77□□□□□ -1.97
USP25-208ENST00000478932 IGKV2-28A0A075B6P5 120 aa2.77□□□□□ -1.97
USP25-208ENST00000478932 TRBV30A0A0K0K1B3 111 aa2.77□□□□□ -1.97
USP25-208ENST00000478932 IGKV2D-28P01615 120 aa2.77□□□□□ -1.97
USP25-208ENST00000478932 RNF151Q2KHN1 245 aa2.77□□□□□ -1.97
USP25-208ENST00000478932 LINC00337Q8N6G1 96 aa2.77□□□□□ -1.97
USP25-208ENST00000478932 CLEC2BQ92478 149 aa2.77□□□□□ -1.97
USP25-208ENST00000478932 Q9HAA7 133 aa2.77□□□□□ -1.97
USP25-208ENST00000478932 TRAV10A0A0B4J240 114 aa2.76□□□□□ -1.97
USP25-208ENST00000478932 C9JAW5 83 aa2.76□□□□□ -1.97
USP25-208ENST00000478932 SPAG11BQ08648 103 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms