RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 DAND5Q8N907 189 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 COX7B2Q8TF08 81 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 CLEC2BQ92478 149 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 FAM104AQ969W3 186 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 TMEM126AQ9H061 195 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 DOPEY1Q5JWR5 2465 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 DCHS1Q96JQ0 3298 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 SPTBN4Q9H254 2564 aa3□□□□□ -1.93
GPNMB-210ENST00000478451 TRAV13-1A0A0B4J241 112 aa2.99□□□□□ -1.93
GPNMB-210ENST00000478451 DEFB136Q30KP8 78 aa2.99□□□□□ -1.93
GPNMB-210ENST00000478451 DEFB113Q30KQ7 82 aa2.99□□□□□ -1.93
GPNMB-210ENST00000478451 ZNF625Q96I27 306 aaPredicted RBP2.99□□□□□ -1.93
GPNMB-210ENST00000478451 CDC42SE2Q9NRR3 84 aa2.99□□□□□ -1.93
GPNMB-210ENST00000478451 XCL2Q9UBD3 114 aa2.99□□□□□ -1.93
GPNMB-210ENST00000478451 TRGV2A0A075B6R0 118 aa2.98□□□□□ -1.93
GPNMB-210ENST00000478451 TRGV4A0A0C4DH28 118 aa2.98□□□□□ -1.93
GPNMB-210ENST00000478451 A0A1B0GX51 115 aa2.98□□□□□ -1.93
GPNMB-210ENST00000478451 IBA57-AS1B1ANH7 110 aa2.98□□□□□ -1.93
GPNMB-210ENST00000478451 F5H768 121 aa2.98□□□□□ -1.93
GPNMB-210ENST00000478451 BAALC-AS2P0C853 105 aa2.98□□□□□ -1.93
GPNMB-210ENST00000478451 DSCR10P59022 87 aa2.98□□□□□ -1.93
GPNMB-210ENST00000478451 COX6A2Q02221 97 aa2.98□□□□□ -1.93
GPNMB-210ENST00000478451 S100A7L2Q5SY68 101 aa2.98□□□□□ -1.93
GPNMB-210ENST00000478451 C1orf158Q8N1D5 194 aa2.98□□□□□ -1.93
GPNMB-210ENST00000478451 LINC01561Q8N1V8 128 aa2.98□□□□□ -1.93
GPNMB-210ENST00000478451 SND1-IT1Q9HBX3 110 aa2.98□□□□□ -1.93
GPNMB-210ENST00000478451 ESM1Q9NQ30 184 aa2.98□□□□□ -1.93
GPNMB-210ENST00000478451 ASH1LQ9NR48 2969 aaKnown RBP2.98□□□□□ -1.93
GPNMB-210ENST00000478451 CELSR1Q9NYQ6 3014 aa2.97□□□□□ -1.93
GPNMB-210ENST00000478451 CSMD1Q96PZ7 3565 aa2.97□□□□□ -1.93
GPNMB-210ENST00000478451 ATOX1O00244 68 aa2.97□□□□□ -1.93
GPNMB-210ENST00000478451 LINC00158P58513 81 aa2.97□□□□□ -1.93
GPNMB-210ENST00000478451 SS18Q15532 418 aa2.97□□□□□ -1.93
GPNMB-210ENST00000478451 Q6ZTI0 123 aa2.97□□□□□ -1.93
GPNMB-210ENST00000478451 MUC7Q8TAX7 377 aa2.97□□□□□ -1.93
GPNMB-210ENST00000478451 CHCHD5Q9BSY4 110 aa2.97□□□□□ -1.93
GPNMB-210ENST00000478451 OCR1Q9BZK8 76 aa2.97□□□□□ -1.93
GPNMB-210ENST00000478451 NOP10Q9NPE3 64 aaKnown RBP2.97□□□□□ -1.93
GPNMB-210ENST00000478451 CHD8Q9HCK8 2581 aa2.97□□□□□ -1.93
GPNMB-210ENST00000478451 NCOR2Q9Y618 2525 aa2.96□□□□□ -1.93
GPNMB-210ENST00000478451 FLNCQ14315 2725 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 CRYBG3Q68DQ2 2970 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 TRBV6-8A0A0A6YYG3 113 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 FAM236AA0A1B0GUQ0 79 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 FAM236BA0A1B0GV22 79 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 JMJD7-PLA2G4BH0Y9G9 81 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 H3BQ85 93 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 UQCRQO14949 82 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 LINC00694P0DN24 101 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 SDIM1Q6ZPB5 146 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 NTM-AS1Q6ZSK4 140 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 MIR7-3HGQ8N6C7 128 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 Q8NBF4 154 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 C16orf95Q9H693 158 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 TOMM7Q9P0U1 55 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 SS18L2Q9UHA2 77 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 UTP20O75691 2785 aaKnown RBP2.96□□□□□ -1.94
GPNMB-210ENST00000478451 PKD1L2Q7Z442 2459 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 SORL1Q92673 2214 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 CSPG4Q6UVK1 2322 aa2.96□□□□□ -1.94
GPNMB-210ENST00000478451 IGSF10Q6WRI0 2623 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 MYO18BQ8IUG5 2567 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 SMIM9A6NGZ8 99 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 CCDC179H3BU77 68 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 IGLV1-51P01701 117 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 PRB1P04280 392 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 COX17Q14061 63 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 C6orf226Q5I0X4 101 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 C9orf153Q5TBE3 101 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 ATP5EP2Q5VTU8 51 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 Q6JHZ5 121 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 SOSTDC1Q6X4U4 206 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 Q8IZM0 81 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 C3orf22Q8N5N4 141 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.95□□□□□ -1.94
GPNMB-210ENST00000478451 KIR2DL5BQ8NHK3 375 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 NRGNQ92686 78 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 ORMDL1Q9P0S3 153 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 Q9UF83 564 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 CELSR2Q9HCU4 2923 aa2.95□□□□□ -1.94
GPNMB-210ENST00000478451 UBR5O95071 2799 aaPredicted RBP2.95□□□□□ -1.94
GPNMB-210ENST00000478451 ZFHX3Q15911 3703 aa2.94□□□□□ -1.94
GPNMB-210ENST00000478451 MXRA5Q9NR99 2828 aa2.94□□□□□ -1.94
GPNMB-210ENST00000478451 IGHV3OR16-9A0A0B4J2B5 98 aa2.94□□□□□ -1.94
GPNMB-210ENST00000478451 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
GPNMB-210ENST00000478451 NDUFC2O95298 119 aa2.94□□□□□ -1.94
GPNMB-210ENST00000478451 LY6G6DO95868 133 aa2.94□□□□□ -1.94
GPNMB-210ENST00000478451 PRM2P04554 102 aa2.94□□□□□ -1.94
GPNMB-210ENST00000478451 OR13C6PQ8NH95 151 aa2.94□□□□□ -1.94
GPNMB-210ENST00000478451 SMIM11BQ8TCY0 68 aa2.94□□□□□ -1.94
GPNMB-210ENST00000478451 CFAP46Q8IYW2 2715 aa2.94□□□□□ -1.94
GPNMB-210ENST00000478451 CACNA1AO00555 2505 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 RELNP78509 3460 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 IGKV3OR2-268A0A0C4DH90 116 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 LINC00959A0A1B0GUT2 108 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 LYRM9A8MSI8 78 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 EPM2AB3EWF7 344 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 TMEM256-PLSCR3K7ERE1 68 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 LECT2O14960 151 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 COX7CP15954 63 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms