RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 TMEM97Q5BJF2 176 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 SPINK9Q5DT21 86 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 COL5A1-AS1Q5SY13 56 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 TMEM78Q5T7P6 136 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 LYRM7Q5U5X0 104 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 UNQ5815/PRO19632Q6UWF5 114 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 LINC00322Q6ZN03 302 aaPredicted RBP0.7□□□□□ -2.3
CACUL1-202ENST00000477583 ZNF705AQ6ZN79 300 aaPredicted RBP0.7□□□□□ -2.3
CACUL1-202ENST00000477583 GOLT1AQ6ZVE7 132 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 KTN1-AS1Q86SY8 53 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 DYNAPQ8N1N2 210 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 Q8N8P6 123 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 LEAP2Q969E1 77 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 IFI27L1Q96BM0 104 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 ZC2HC1AQ96GY0 325 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 TMEM141Q96I45 108 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 HSPB9Q9BQS6 159 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 FAM103A1Q9BTL3 118 aaKnown RBP0.7□□□□□ -2.3
CACUL1-202ENST00000477583 VAMP8Q9BV40 100 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 SMIM2Q9BVW6 85 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 DPH3P1Q9H4G8 78 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 TP73-AS1Q9UF72 201 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 LOC400499M0QZD8 3231 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 USP24Q9UPU5 2620 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 ABCA2Q9BZC7 2435 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 MED13LQ71F56 2210 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 VPS13AQ96RL7 3174 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 SPTBN4Q9H254 2564 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 KIAA2026Q5HYC2 2103 aa0.7□□□□□ -2.3
CACUL1-202ENST00000477583 DOCK11Q5JSL3 2073 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 REV3LO60673 3130 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 POLQO75417 2590 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 KMT2BQ9UMN6 2715 aaPredicted RBP0.69□□□□□ -2.3
CACUL1-202ENST00000477583 SMG1Q96Q15 3661 aaKnown RBP0.69□□□□□ -2.3
CACUL1-202ENST00000477583 TRBV20-1A0A075B6N2 111 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 TRAV7A0A075B6U4 112 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 A0A087WX48 190 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 TRAV5A0A0B4J249 113 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 TRAV4A0A0B4J268 109 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 TRBV6-4A0A1B0GX49 114 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 SMIM9A6NGZ8 99 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 IGIPA6NJ69 53 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 D6R8Y8 96 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 G3V318 75 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 H3BT86 120 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 H3BUX3 64 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 C19orf84I3L1E1 186 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 J3QR89 54 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 K7EP13 123 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 M0QY20 66 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 TIMM17BO60830 172 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 IGHV3-7P01780 117 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 IGKCP01834 107 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 TFF1P04155 84 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 ARMS2P0C7Q2 107 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 LINC00694P0DN24 101 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 FGF6P10767 208 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 RNASE3P12724 160 aaKnown RBP0.69□□□□□ -2.3
CACUL1-202ENST00000477583 ZNF25P17030 456 aaPredicted RBP0.69□□□□□ -2.3
CACUL1-202ENST00000477583 CKS2P33552 79 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 RNASE4P34096 147 aaKnown RBP0.69□□□□□ -2.3
CACUL1-202ENST00000477583 IFI27P40305 119 aaPredicted RBP0.69□□□□□ -2.3
CACUL1-202ENST00000477583 RPL28P46779 137 aaKnown RBP0.69□□□□□ -2.3
CACUL1-202ENST00000477583 KRTDAPP60985 99 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 GNG5P63218 68 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 MRPS36P82909 103 aaKnown RBP0.69□□□□□ -2.3
CACUL1-202ENST00000477583 KLRD1Q13241 179 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 COTL1Q14019 142 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 SPATA45Q537H7 98 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 BVES-AS1Q5T3Y7 98 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 GDF5OSQ5U4N7 250 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 GTF2H5Q6ZYL4 71 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 NDUFA11Q86Y39 141 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 EXOC3-AS1Q8N2X6 119 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 OR5A1Q8NGJ0 315 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 ATP6V0E2Q8NHE4 81 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 TMEM263Q8WUH6 116 aaKnown RBP0.69□□□□□ -2.3
CACUL1-202ENST00000477583 COPS9Q8WXC6 57 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 TOMM6Q96B49 74 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 PRELID3AQ96N28 172 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 RETNLBQ9BQ08 111 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 RHPN1-AS1Q9BWJ2 59 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 SPANXDQ9BXN6 97 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 SNHG12Q9BXW3 62 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 AGPAT4-IT1Q9H0P7 198 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 HEATR1Q9H583 2144 aaKnown RBP0.69□□□□□ -2.3
CACUL1-202ENST00000477583 SPANXA1Q9NS26 97 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 CYSLTR1Q9Y271 337 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 HILPDAQ9Y5L2 63 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 RELNP78509 3460 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 UNC79Q9P2D8 2635 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 C2CD3Q4AC94 2353 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 MTORP42345 2549 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 FASNP49327 2511 aaKnown RBP0.69□□□□□ -2.3
CACUL1-202ENST00000477583 TLN2Q9Y4G6 2542 aa0.69□□□□□ -2.3
CACUL1-202ENST00000477583 PIEZO2Q9H5I5 2752 aa0.68□□□□□ -2.3
CACUL1-202ENST00000477583 ADGRG4Q8IZF6 3080 aa0.68□□□□□ -2.3
CACUL1-202ENST00000477583 LAMA5O15230 3695 aa0.68□□□□□ -2.3
CACUL1-202ENST00000477583 TRBV7-3A0A075B6L6 115 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms