RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 RPL11P62913 178 aaKnown RBP9.01□□□□□ -0.97
RTFDC1-207ENST00000477573 ORMDL1Q9P0S3 153 aa9.01□□□□□ -0.97
RTFDC1-207ENST00000477573 TLN2Q9Y4G6 2542 aa9□□□□□ -0.97
RTFDC1-207ENST00000477573 HOXD3P31249 432 aaPredicted RBP9□□□□□ -0.97
RTFDC1-207ENST00000477573 PRR9Q5T870 116 aa9□□□□□ -0.97
RTFDC1-207ENST00000477573 RHPN1-AS1Q9BWJ2 59 aa9□□□□□ -0.97
RTFDC1-207ENST00000477573 A0A087WYN8 130 aa9□□□□□ -0.97
RTFDC1-207ENST00000477573 CRPP02741 224 aa9□□□□□ -0.97
RTFDC1-207ENST00000477573 MIR7-3HGQ8N6C7 128 aa9□□□□□ -0.97
RTFDC1-207ENST00000477573 C11orf45Q8TAV5 145 aa9□□□□□ -0.97
RTFDC1-207ENST00000477573 FLNAP21333 2647 aaKnown RBP8.99□□□□□ -0.97
RTFDC1-207ENST00000477573 NDUFS5O43920 106 aa8.99□□□□□ -0.97
RTFDC1-207ENST00000477573 TMEM254Q8TBM7 123 aa8.99□□□□□ -0.97
RTFDC1-207ENST00000477573 MUC4Q99102 2169 aa8.99□□□□□ -0.97
RTFDC1-207ENST00000477573 F5H697 171 aa8.98□□□□□ -0.97
RTFDC1-207ENST00000477573 FUSP35637 526 aaKnown RBP eCLIP8.98□□□□□ -0.97
RTFDC1-207ENST00000477573 C10orf99Q6UWK7 81 aa8.98□□□□□ -0.97
RTFDC1-207ENST00000477573 ZFAND2AQ8N6M9 145 aa8.98□□□□□ -0.97
RTFDC1-207ENST00000477573 MYO9AB2RTY4 2548 aa8.98□□□□□ -0.97
RTFDC1-207ENST00000477573 UNC79Q9P2D8 2635 aa8.98□□□□□ -0.97
RTFDC1-207ENST00000477573 IGLV5-45A0A087WSX0 123 aa8.97□□□□□ -0.97
RTFDC1-207ENST00000477573 TRAV10A0A0B4J240 114 aa8.97□□□□□ -0.97
RTFDC1-207ENST00000477573 Q6ZTC4 211 aa8.97□□□□□ -0.97
RTFDC1-207ENST00000477573 UBE2BP63146 152 aa8.97□□□□□ -0.97
RTFDC1-207ENST00000477573 CXCL6P80162 114 aa8.97□□□□□ -0.97
RTFDC1-207ENST00000477573 ITPR2Q14571 2701 aa8.96□□□□□ -0.97
RTFDC1-207ENST00000477573 A0A087WZ39 114 aa8.96□□□□□ -0.97
RTFDC1-207ENST00000477573 M0QY20 66 aa8.96□□□□□ -0.97
RTFDC1-207ENST00000477573 FAM104AQ969W3 186 aa8.96□□□□□ -0.97
RTFDC1-207ENST00000477573 LINC00588Q9Y4M8 146 aa8.96□□□□□ -0.97
RTFDC1-207ENST00000477573 ZNF469Q96JG9 3925 aaPredicted RBP8.96□□□□□ -0.98
RTFDC1-207ENST00000477573 DEFB104AQ8WTQ1 72 aa8.96□□□□□ -0.98
RTFDC1-207ENST00000477573 Q9H8V8 135 aa8.96□□□□□ -0.98
RTFDC1-207ENST00000477573 PDZD2O15018 2839 aa8.95□□□□□ -0.98
RTFDC1-207ENST00000477573 IGLV5-39A0A0G2JS06 123 aa8.95□□□□□ -0.98
RTFDC1-207ENST00000477573 M0R378 163 aa8.95□□□□□ -0.98
RTFDC1-207ENST00000477573 Q6ZVQ6 151 aa8.95□□□□□ -0.98
RTFDC1-207ENST00000477573 hDV103S1A0JD37 113 aa8.95□□□□□ -0.98
RTFDC1-207ENST00000477573 IGKV2-29A2NJV5 120 aaPredicted RBP8.95□□□□□ -0.98
RTFDC1-207ENST00000477573 PRYO14603 147 aa8.95□□□□□ -0.98
RTFDC1-207ENST00000477573 LECT2O14960 151 aa8.95□□□□□ -0.98
RTFDC1-207ENST00000477573 SONP18583 2426 aaKnown RBP8.94□□□□□ -0.98
RTFDC1-207ENST00000477573 IGKV3-7A0A075B6H7 116 aa8.94□□□□□ -0.98
RTFDC1-207ENST00000477573 Q6ZRP5 223 aa8.94□□□□□ -0.98
RTFDC1-207ENST00000477573 LINC00167Q96N53 147 aa8.94□□□□□ -0.98
RTFDC1-207ENST00000477573 GCN1Q92616 2671 aaKnown RBP8.94□□□□□ -0.98
RTFDC1-207ENST00000477573 DNAJC9-AS1A6NH13 148 aa8.93□□□□□ -0.98
RTFDC1-207ENST00000477573 LINC01547P58512 204 aaPredicted RBP8.93□□□□□ -0.98
RTFDC1-207ENST00000477573 NREPQ16612 68 aa8.93□□□□□ -0.98
RTFDC1-207ENST00000477573 SMIM11BQ8TCY0 68 aa8.93□□□□□ -0.98
RTFDC1-207ENST00000477573 GNRH2O43555 120 aa8.92□□□□□ -0.98
RTFDC1-207ENST00000477573 DGAT2L7PQ6IED9 249 aa8.92□□□□□ -0.98
RTFDC1-207ENST00000477573 C11orf72Q8NBR9 251 aa8.92□□□□□ -0.98
RTFDC1-207ENST00000477573 TMEM256-PLSCR3K7ERE1 68 aa8.92□□□□□ -0.98
RTFDC1-207ENST00000477573 KRTAP1-1Q07627 177 aa8.92□□□□□ -0.98
RTFDC1-207ENST00000477573 PHF5AQ7RTV0 110 aaKnown RBP8.92□□□□□ -0.98
RTFDC1-207ENST00000477573 C4orf3Q8WVX3 66 aa8.92□□□□□ -0.98
RTFDC1-207ENST00000477573 A0A087WWL8 130 aa8.91□□□□□ -0.98
RTFDC1-207ENST00000477573 KHDC1LQ5JSQ8 128 aa8.9□□□□□ -0.98
RTFDC1-207ENST00000477573 Q8N3U1 123 aa8.9□□□□□ -0.98
RTFDC1-207ENST00000477573 LINC00337Q8N6G1 96 aa8.9□□□□□ -0.98
RTFDC1-207ENST00000477573 CDKN2A-AS1Q9UH64 79 aa8.9□□□□□ -0.98
RTFDC1-207ENST00000477573 CD164L2Q6UWJ8 174 aa8.9□□□□□ -0.98
RTFDC1-207ENST00000477573 H3BS24 57 aa8.89□□□□□ -0.99
RTFDC1-207ENST00000477573 UBE2L6O14933 153 aa8.89□□□□□ -0.99
RTFDC1-207ENST00000477573 ACANP16112 2415 aa8.89□□□□□ -0.99
RTFDC1-207ENST00000477573 AKAP9Q99996 3911 aa8.89□□□□□ -0.99
RTFDC1-207ENST00000477573 RPL36AP83881 106 aaKnown RBP8.88□□□□□ -0.99
RTFDC1-207ENST00000477573 RPL36ALQ969Q0 106 aaKnown RBP8.88□□□□□ -0.99
RTFDC1-207ENST00000477573 FASNP49327 2511 aaKnown RBP8.88□□□□□ -0.99
RTFDC1-207ENST00000477573 K7EQG2 157 aa8.88□□□□□ -0.99
RTFDC1-207ENST00000477573 RNASE1P07998 156 aaKnown RBP8.88□□□□□ -0.99
RTFDC1-207ENST00000477573 ESM1Q9NQ30 184 aa8.88□□□□□ -0.99
RTFDC1-207ENST00000477573 IGKV2-28A0A075B6P5 120 aa8.87□□□□□ -0.99
RTFDC1-207ENST00000477573 TRAV22A0A0B4J277 110 aa8.87□□□□□ -0.99
RTFDC1-207ENST00000477573 C8orf87E5RJ46 101 aa8.87□□□□□ -0.99
RTFDC1-207ENST00000477573 IGKV2D-28P01615 120 aa8.87□□□□□ -0.99
RTFDC1-207ENST00000477573 SLURP1P55000 103 aa8.87□□□□□ -0.99
RTFDC1-207ENST00000477573 DEFB136Q30KP8 78 aa8.87□□□□□ -0.99
RTFDC1-207ENST00000477573 HECTD1Q9ULT8 2610 aa8.87□□□□□ -0.99
RTFDC1-207ENST00000477573 IGHV1OR15-1A0A075B7D0 117 aa8.86□□□□□ -0.99
RTFDC1-207ENST00000477573 LOC110117498A0A087WWA1 95 aa8.86□□□□□ -0.99
RTFDC1-207ENST00000477573 ZNF73O43830 326 aaPredicted RBP8.86□□□□□ -0.99
RTFDC1-207ENST00000477573 FAM74A4Q5TZK3 123 aa8.86□□□□□ -0.99
RTFDC1-207ENST00000477573 DEFB1P60022 68 aa8.86□□□□□ -0.99
RTFDC1-207ENST00000477573 SYCNQ0VAF6 134 aa8.86□□□□□ -0.99
RTFDC1-207ENST00000477573 C18orf65Q6ZTR6 163 aa8.86□□□□□ -0.99
RTFDC1-207ENST00000477573 ANK3Q12955 4377 aaKnown RBP8.86□□□□□ -0.99
RTFDC1-207ENST00000477573 FAM19A3Q7Z5A8 133 aa8.85□□□□□ -0.99
RTFDC1-207ENST00000477573 SND1-IT1Q9HBX3 110 aa8.85□□□□□ -0.99
RTFDC1-207ENST00000477573 HAMPP81172 84 aa8.85□□□□□ -0.99
RTFDC1-207ENST00000477573 MTORP42345 2549 aa8.84□□□□□ -0.99
RTFDC1-207ENST00000477573 KLLNB2CW77 178 aa8.84□□□□□ -0.99
RTFDC1-207ENST00000477573 UBE2AP49459 152 aa8.84□□□□□ -0.99
RTFDC1-207ENST00000477573 Q6ZQT0 140 aa8.84□□□□□ -0.99
RTFDC1-207ENST00000477573 IGHV3-38A0A0C4DH36 116 aa8.83□□□□□ -1
RTFDC1-207ENST00000477573 BPY2O14599 106 aa8.83□□□□□ -1
RTFDC1-207ENST00000477573 SLPIP03973 132 aa8.83□□□□□ -1
RTFDC1-207ENST00000477573 ATP11AUNQ6ZP68 121 aa8.83□□□□□ -1
RTFDC1-207ENST00000477573 HIVEP2P31629 2446 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms