RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 TRBV10-1A0A0K0K1A3 114 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 CEBPZOSA8MTT3 80 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 HMGN4O00479 90 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 IGHV3-33P01772 117 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 COX6CP09669 75 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 ARMS2P0C7Q2 107 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 PSMG4Q5JS54 123 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 GDF5OSQ5U4N7 250 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 DEFB107AQ8IZN7 70 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 FDCSPQ8NFU4 85 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 PRR15LQ9BU68 103 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 UBE2D4Q9Y2X8 147 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 SNURFQ9Y675 71 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 LHFPL6Q9Y693 200 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 MED13LQ71F56 2210 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 TRPM2O94759 1503 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 AGLP35573 1532 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 NWD1Q149M9 1564 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 NHSL1Q5SYE7 1610 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 EIF2AK4Q9P2K8 1649 aaKnown RBP0.82□□□□□ -2.28
VPS50-213ENST00000477572 NRXN3Q9Y4C0 1643 aa0.82□□□□□ -2.28
VPS50-213ENST00000477572 FAM208AQ9UK61 1670 aaKnown RBP0.81□□□□□ -2.28
VPS50-213ENST00000477572 LY75O60449 1722 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 DDX60LQ5H9U9 1706 aaKnown RBP0.81□□□□□ -2.28
VPS50-213ENST00000477572 MRC1P22897 1456 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 ATP7BP35670 1465 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 CPS1P31327 1500 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 IGKV3-7A0A075B6H7 116 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 A0A087WVE0 104 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 TRBV6-8A0A0A6YYG3 113 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 A0A0D9SFI3 127 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 LOC101927531A0A1B0GV80 90 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 NUPR2A6NF83 97 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 LEPROTL1O95214 131 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 IFI27P40305 119 aaPredicted RBP0.81□□□□□ -2.28
VPS50-213ENST00000477572 NCBP2-AS2Q69YL0 99 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 C2orf82Q6UX34 121 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 NDUFA11Q86Y39 141 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 MRPL36Q9P0J6 103 aaKnown RBP0.81□□□□□ -2.28
VPS50-213ENST00000477572 SAMD9Q5K651 1589 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 ADCY10Q96PN6 1610 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 IQGAP1P46940 1657 aa0.81□□□□□ -2.28
VPS50-213ENST00000477572 TECTAO75443 2155 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 ALPK2Q86TB3 2170 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 NFAT5O94916 1531 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 CACNA1CQ13936 2221 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 ERCC6L2Q5T890 1561 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 MROH2BQ7Z745 1585 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 KIF21BO75037 1637 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 IGKV3D-7A0A0C4DH55 119 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 A0A0J9YY99 117 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 TRBV7-4A0A0J9YYF1 115 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 LINC01549A6NIU2 74 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 D6R8Y8 96 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 K7EMI3 77 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 M0R3E3 92 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 PPP1R17O96001 155 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 IGHV3-30P01768 117 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 SAA2P0DJI9 122 aaPredicted RBP0.8□□□□□ -2.28
VPS50-213ENST00000477572 IGHV3-30-5P0DP03 117 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 HMGA1P17096 107 aaKnown RBP0.8□□□□□ -2.28
VPS50-213ENST00000477572 CNBPP62633 177 aaKnown RBP0.8□□□□□ -2.28
VPS50-213ENST00000477572 PRB3Q04118 309 aaPredicted RBP0.8□□□□□ -2.28
VPS50-213ENST00000477572 SSBP1Q04837 148 aaKnown RBP0.8□□□□□ -2.28
VPS50-213ENST00000477572 SPAG11BQ08648 103 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 PDE6HQ13956 83 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 ATXN8Q156A1 80 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 C1orf137Q5JT78 98 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 SPAG11AQ6PDA7 123 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 MUSTN1Q8IVN3 82 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 TOMM5Q8N4H5 51 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 PPP1R1CQ8WVI7 109 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 DMAC1Q96GE9 116 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 ORMDL1Q9P0S3 153 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 LENEPQ9Y5L5 61 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 QSER1Q2KHR3 1735 aa0.8□□□□□ -2.28
VPS50-213ENST00000477572 SLIT1O75093 1534 aa0.79□□□□□ -2.28
VPS50-213ENST00000477572 LRRC37A3O60309 1634 aa0.79□□□□□ -2.28
VPS50-213ENST00000477572 ABCA1O95477 2261 aa0.79□□□□□ -2.28
VPS50-213ENST00000477572 IGKV3OR2-268A0A0C4DH90 116 aa0.79□□□□□ -2.28
VPS50-213ENST00000477572 TRBV6-5A0A0K0K1A5 114 aa0.79□□□□□ -2.28
VPS50-213ENST00000477572 HIGD1CA8MV81 97 aa0.79□□□□□ -2.28
VPS50-213ENST00000477572 IGLV3-1P01715 115 aa0.79□□□□□ -2.28
VPS50-213ENST00000477572 IFI6P09912 130 aa0.79□□□□□ -2.28
VPS50-213ENST00000477572 ELOF1P60002 83 aaKnown RBP0.79□□□□□ -2.28
VPS50-213ENST00000477572 ATP5EP2Q5VTU8 51 aa0.79□□□□□ -2.28
VPS50-213ENST00000477572 PATE1Q8WXA2 126 aa0.79□□□□□ -2.28
VPS50-213ENST00000477572 CADP27708 2225 aa0.79□□□□□ -2.28
VPS50-213ENST00000477572 DEPDC5O75140 1603 aa0.78□□□□□ -2.28
VPS50-213ENST00000477572 F8VRH5 84 aa0.78□□□□□ -2.28
VPS50-213ENST00000477572 M0R135 149 aa0.78□□□□□ -2.28
VPS50-213ENST00000477572 PPYP01298 95 aa0.78□□□□□ -2.28
VPS50-213ENST00000477572 PRH1P02810 166 aa0.78□□□□□ -2.28
VPS50-213ENST00000477572 CCL3L1P16619 93 aa0.78□□□□□ -2.28
VPS50-213ENST00000477572 CCL18P55774 89 aa0.78□□□□□ -2.28
VPS50-213ENST00000477572 SPINK7P58062 85 aa0.78□□□□□ -2.28
VPS50-213ENST00000477572 FAM74A4Q5TZK3 123 aa0.78□□□□□ -2.28
VPS50-213ENST00000477572 COX7B2Q8TF08 81 aa0.78□□□□□ -2.28
VPS50-213ENST00000477572 SMIM4Q8WVI0 70 aa0.78□□□□□ -2.28
VPS50-213ENST00000477572 NMES1Q9C002 83 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms