RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 REG3GQ6UW15 175 aa6.84□□□□□ -1.31
PTPRN-213ENST00000476930 FAM19A5Q7Z5A7 132 aaPredicted RBP6.84□□□□□ -1.31
PTPRN-213ENST00000476930 TOMM6Q96B49 74 aa6.84□□□□□ -1.31
PTPRN-213ENST00000476930 TOMM7Q9P0U1 55 aa6.84□□□□□ -1.31
PTPRN-213ENST00000476930 C9orf129Q5T035 196 aaKnown RBP6.83□□□□□ -1.32
PTPRN-213ENST00000476930 PACRGQ96M98 296 aaPredicted RBP6.83□□□□□ -1.32
PTPRN-213ENST00000476930 TIMM17AQ99595 171 aa6.83□□□□□ -1.32
PTPRN-213ENST00000476930 ALKBH7Q9BT30 221 aaPredicted RBP6.83□□□□□ -1.32
PTPRN-213ENST00000476930 GNB1LQ9BYB4 327 aa6.83□□□□□ -1.32
PTPRN-213ENST00000476930 CDKN2A-AS1Q9UH64 79 aa6.83□□□□□ -1.32
PTPRN-213ENST00000476930 NDUFC2-KCTD14E9PQ53 114 aa6.82□□□□□ -1.32
PTPRN-213ENST00000476930 PRSS2P07478 247 aa6.82□□□□□ -1.32
PTPRN-213ENST00000476930 S100PP25815 95 aa6.82□□□□□ -1.32
PTPRN-213ENST00000476930 G0S2P27469 103 aa6.82□□□□□ -1.32
PTPRN-213ENST00000476930 C10orf91Q5T1B1 145 aa6.82□□□□□ -1.32
PTPRN-213ENST00000476930 ERASQ7Z444 233 aa6.82□□□□□ -1.32
PTPRN-213ENST00000476930 SCGB3A1Q96QR1 104 aa6.82□□□□□ -1.32
PTPRN-213ENST00000476930 LPAP08519 4548 aa6.82□□□□□ -1.32
PTPRN-213ENST00000476930 HERVK_113P63121 156 aa6.81□□□□□ -1.32
PTPRN-213ENST00000476930 C6orf226Q5I0X4 101 aa6.81□□□□□ -1.32
PTPRN-213ENST00000476930 PAPPA-AS1Q5QFB9 102 aa6.81□□□□□ -1.32
PTPRN-213ENST00000476930 Q8IZM0 81 aa6.81□□□□□ -1.32
PTPRN-213ENST00000476930 GEMIN7Q9H840 131 aaKnown RBP6.81□□□□□ -1.32
PTPRN-213ENST00000476930 LINC01546A6NGU7 62 aa6.8□□□□□ -1.32
PTPRN-213ENST00000476930 M0QXV9 152 aa6.8□□□□□ -1.32
PTPRN-213ENST00000476930 IGLV7-43P04211 117 aa6.8□□□□□ -1.32
PTPRN-213ENST00000476930 CKS1BP61024 79 aa6.8□□□□□ -1.32
PTPRN-213ENST00000476930 FABP9Q0Z7S8 132 aa6.8□□□□□ -1.32
PTPRN-213ENST00000476930 LINC00469Q8N7U9 141 aa6.8□□□□□ -1.32
PTPRN-213ENST00000476930 MRPL18Q9H0U6 180 aaKnown RBP6.8□□□□□ -1.32
PTPRN-213ENST00000476930 RPS10P5Q9NQ39 176 aa6.8□□□□□ -1.32
PTPRN-213ENST00000476930 SEC11AP67812 179 aa6.79□□□□□ -1.32
PTPRN-213ENST00000476930 CARHSP1Q9Y2V2 147 aaKnown RBP6.79□□□□□ -1.32
PTPRN-213ENST00000476930 SMIM1B2RUZ4 78 aa6.78□□□□□ -1.32
PTPRN-213ENST00000476930 RHEBQ15382 184 aa6.78□□□□□ -1.32
PTPRN-213ENST00000476930 CST9LQ9H4G1 147 aa6.78□□□□□ -1.32
PTPRN-213ENST00000476930 XAGE1AQ9HD64 81 aa6.78□□□□□ -1.32
PTPRN-213ENST00000476930 TINCRA0A1B0GVN0 87 aa6.77□□□□□ -1.33
PTPRN-213ENST00000476930 F8VRH5 84 aa6.77□□□□□ -1.33
PTPRN-213ENST00000476930 UBE2BP63146 152 aa6.77□□□□□ -1.33
PTPRN-213ENST00000476930 COX19Q49B96 90 aa6.77□□□□□ -1.33
PTPRN-213ENST00000476930 FA2HQ7L5A8 372 aa6.77□□□□□ -1.33
PTPRN-213ENST00000476930 RNF213Q63HN8 5207 aa6.77□□□□□ -1.33
PTPRN-213ENST00000476930 IGLV5-45A0A087WSX0 123 aa6.76□□□□□ -1.33
PTPRN-213ENST00000476930 DIRC1Q969H9 104 aa6.76□□□□□ -1.33
PTPRN-213ENST00000476930 URB1-AS1Q96HZ7 61 aa6.76□□□□□ -1.33
PTPRN-213ENST00000476930 SMCO4Q9NRQ5 59 aa6.76□□□□□ -1.33
PTPRN-213ENST00000476930 A0A096LNJ9 63 aa6.75□□□□□ -1.33
PTPRN-213ENST00000476930 LINC01549A6NIU2 74 aa6.75□□□□□ -1.33
PTPRN-213ENST00000476930 H0Y9J4 135 aa6.75□□□□□ -1.33
PTPRN-213ENST00000476930 SPINK8P0C7L1 97 aa6.75□□□□□ -1.33
PTPRN-213ENST00000476930 PMVKQ15126 192 aa6.75□□□□□ -1.33
PTPRN-213ENST00000476930 PDZD11Q5EBL8 140 aa6.75□□□□□ -1.33
PTPRN-213ENST00000476930 PRR26Q8N8Z3 221 aa6.75□□□□□ -1.33
PTPRN-213ENST00000476930 COX7B2Q8TF08 81 aa6.75□□□□□ -1.33
PTPRN-213ENST00000476930 C22orf24Q9Y442 160 aa6.75□□□□□ -1.33
PTPRN-213ENST00000476930 C18orf32Q8TCD1 76 aa6.74□□□□□ -1.33
PTPRN-213ENST00000476930 TRAPPC1Q9Y5R8 145 aa6.74□□□□□ -1.33
PTPRN-213ENST00000476930 APOC3P02656 99 aa6.73□□□□□ -1.33
PTPRN-213ENST00000476930 CXCL5P42830 114 aa6.73□□□□□ -1.33
PTPRN-213ENST00000476930 PMCHL1Q16048 86 aa6.73□□□□□ -1.33
PTPRN-213ENST00000476930 KRTAP1-4P0C5Y4 121 aa6.72□□□□□ -1.33
PTPRN-213ENST00000476930 LINC00614P0C842 121 aa6.72□□□□□ -1.33
PTPRN-213ENST00000476930 NDUFA6P56556 154 aa6.72□□□□□ -1.33
PTPRN-213ENST00000476930 RAB5BP61020 215 aa6.72□□□□□ -1.33
PTPRN-213ENST00000476930 IGLC3P0DOY3 106 aa6.71□□□□□ -1.34
PTPRN-213ENST00000476930 H3BRM9 83 aa6.7□□□□□ -1.34
PTPRN-213ENST00000476930 HBDP02042 147 aa6.7□□□□□ -1.34
PTPRN-213ENST00000476930 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
PTPRN-213ENST00000476930 LBHQ53QV2 105 aaPredicted RBP6.7□□□□□ -1.34
PTPRN-213ENST00000476930 MRPL55Q7Z7F7 128 aaKnown RBP6.7□□□□□ -1.34
PTPRN-213ENST00000476930 TP73-AS1Q9UF72 201 aa6.7□□□□□ -1.34
PTPRN-213ENST00000476930 IGLV5-39A0A0G2JS06 123 aa6.69□□□□□ -1.34
PTPRN-213ENST00000476930 RPL37AP8A6NKH3 93 aa6.69□□□□□ -1.34
PTPRN-213ENST00000476930 NUPR1O60356 82 aa6.69□□□□□ -1.34
PTPRN-213ENST00000476930 ZNF861PO60384 105 aa6.69□□□□□ -1.34
PTPRN-213ENST00000476930 SNAPINO95295 136 aa6.69□□□□□ -1.34
PTPRN-213ENST00000476930 ZNF22P17026 224 aaPredicted RBP6.69□□□□□ -1.34
PTPRN-213ENST00000476930 LINC00167Q96N53 147 aa6.69□□□□□ -1.34
PTPRN-213ENST00000476930 GAGE10A6NGK3 116 aa6.68□□□□□ -1.34
PTPRN-213ENST00000476930 SVBPQ8N300 66 aa6.68□□□□□ -1.34
PTPRN-213ENST00000476930 YPEL4Q96NS1 127 aa6.68□□□□□ -1.34
PTPRN-213ENST00000476930 IGLV1-50A0A075B6I6 118 aa6.67□□□□□ -1.34
PTPRN-213ENST00000476930 C11orf86A6NJI1 115 aa6.67□□□□□ -1.34
PTPRN-213ENST00000476930 SCO1O75880 301 aa6.67□□□□□ -1.34
PTPRN-213ENST00000476930 ATP5LO75964 103 aa6.67□□□□□ -1.34
PTPRN-213ENST00000476930 PFN2P35080 140 aa6.67□□□□□ -1.34
PTPRN-213ENST00000476930 NDUFA5Q16718 116 aa6.67□□□□□ -1.34
PTPRN-213ENST00000476930 BAGE3Q86Y29 109 aa6.67□□□□□ -1.34
PTPRN-213ENST00000476930 IGLV5-37A0A075B6J1 123 aa6.66□□□□□ -1.34
PTPRN-213ENST00000476930 BCE1O60756 84 aa6.66□□□□□ -1.34
PTPRN-213ENST00000476930 ZNF625Q96I27 306 aaPredicted RBP6.65□□□□□ -1.34
PTPRN-213ENST00000476930 TMEM170BQ5T4T1 132 aa6.64□□□□□ -1.35
PTPRN-213ENST00000476930 NKAPP1Q8N9T2 125 aa6.64□□□□□ -1.35
PTPRN-213ENST00000476930 SND1-IT1Q9HBX3 110 aa6.64□□□□□ -1.35
PTPRN-213ENST00000476930 ERG28Q9UKR5 140 aa6.64□□□□□ -1.35
PTPRN-213ENST00000476930 RPL28P46779 137 aaKnown RBP6.63□□□□□ -1.35
PTPRN-213ENST00000476930 CBLN2Q8IUK8 224 aa6.63□□□□□ -1.35
PTPRN-213ENST00000476930 CHTOPQ9Y3Y2 248 aaKnown RBP6.63□□□□□ -1.35
PTPRN-213ENST00000476930 IGKV2-28A0A075B6P5 120 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms