RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 ERASQ7Z444 233 aa8.65□□□□□ -1.02
SLC6A8-209ENST00000476466 FAM19A5Q7Z5A7 132 aaPredicted RBP8.65□□□□□ -1.02
SLC6A8-209ENST00000476466 LINC01600Q96MT4 127 aa8.65□□□□□ -1.02
SLC6A8-209ENST00000476466 SCGB3A1Q96QR1 104 aa8.65□□□□□ -1.02
SLC6A8-209ENST00000476466 TOMM7Q9P0U1 55 aa8.65□□□□□ -1.02
SLC6A8-209ENST00000476466 TRBV30A0A0K0K1B3 111 aa8.64□□□□□ -1.03
SLC6A8-209ENST00000476466 FABP9Q0Z7S8 132 aa8.64□□□□□ -1.03
SLC6A8-209ENST00000476466 SMIM1B2RUZ4 78 aa8.63□□□□□ -1.03
SLC6A8-209ENST00000476466 NDUFC2-KCTD14E9PQ53 114 aa8.63□□□□□ -1.03
SLC6A8-209ENST00000476466 APOC3P02656 99 aa8.63□□□□□ -1.03
SLC6A8-209ENST00000476466 MT-ND6P03923 174 aa8.63□□□□□ -1.03
SLC6A8-209ENST00000476466 SPINK6Q6UWN8 80 aa8.63□□□□□ -1.03
SLC6A8-209ENST00000476466 Q8IZM0 81 aa8.63□□□□□ -1.03
SLC6A8-209ENST00000476466 IGLV5-45A0A087WSX0 123 aa8.62□□□□□ -1.03
SLC6A8-209ENST00000476466 HERVK_113P63121 156 aa8.62□□□□□ -1.03
SLC6A8-209ENST00000476466 LINC00469Q8N7U9 141 aa8.62□□□□□ -1.03
SLC6A8-209ENST00000476466 CST9LQ9H4G1 147 aa8.62□□□□□ -1.03
SLC6A8-209ENST00000476466 SCO1O75880 301 aa8.61□□□□□ -1.03
SLC6A8-209ENST00000476466 C1orf137Q5JT78 98 aa8.61□□□□□ -1.03
SLC6A8-209ENST00000476466 FA2HQ7L5A8 372 aa8.61□□□□□ -1.03
SLC6A8-209ENST00000476466 C18orf32Q8TCD1 76 aa8.61□□□□□ -1.03
SLC6A8-209ENST00000476466 PACRGQ96M98 296 aaPredicted RBP8.61□□□□□ -1.03
SLC6A8-209ENST00000476466 YPEL4Q96NS1 127 aa8.61□□□□□ -1.03
SLC6A8-209ENST00000476466 GEMIN7Q9H840 131 aaKnown RBP8.61□□□□□ -1.03
SLC6A8-209ENST00000476466 PLA2G2DQ9UNK4 145 aa8.61□□□□□ -1.03
SLC6A8-209ENST00000476466 TINCRA0A1B0GVN0 87 aa8.6□□□□□ -1.03
SLC6A8-209ENST00000476466 M0QXV9 152 aa8.6□□□□□ -1.03
SLC6A8-209ENST00000476466 KRTAP10-8P60410 259 aa8.6□□□□□ -1.03
SLC6A8-209ENST00000476466 PMCHL1Q16048 86 aa8.6□□□□□ -1.03
SLC6A8-209ENST00000476466 COX19Q49B96 90 aa8.6□□□□□ -1.03
SLC6A8-209ENST00000476466 PAPPA-AS1Q5QFB9 102 aa8.6□□□□□ -1.03
SLC6A8-209ENST00000476466 PRSS2P07478 247 aa8.59□□□□□ -1.03
SLC6A8-209ENST00000476466 SPINK8P0C7L1 97 aa8.59□□□□□ -1.03
SLC6A8-209ENST00000476466 G0S2P27469 103 aa8.59□□□□□ -1.03
SLC6A8-209ENST00000476466 C6orf226Q5I0X4 101 aa8.59□□□□□ -1.03
SLC6A8-209ENST00000476466 XAGE1AQ9HD64 81 aa8.59□□□□□ -1.03
SLC6A8-209ENST00000476466 CKS1BP61024 79 aa8.58□□□□□ -1.04
SLC6A8-209ENST00000476466 SEC11AP67812 179 aa8.58□□□□□ -1.04
SLC6A8-209ENST00000476466 SMCO4Q9NRQ5 59 aa8.58□□□□□ -1.04
SLC6A8-209ENST00000476466 TRAPPC1Q9Y5R8 145 aa8.58□□□□□ -1.04
SLC6A8-209ENST00000476466 F8VRH5 84 aa8.57□□□□□ -1.04
SLC6A8-209ENST00000476466 IGLV7-43P04211 117 aa8.57□□□□□ -1.04
SLC6A8-209ENST00000476466 PMVKQ15126 192 aa8.57□□□□□ -1.04
SLC6A8-209ENST00000476466 LPAP08519 4548 aa8.56□□□□□ -1.04
SLC6A8-209ENST00000476466 REG3GQ6UW15 175 aa8.56□□□□□ -1.04
SLC6A8-209ENST00000476466 PDZD11Q5EBL8 140 aa8.55□□□□□ -1.04
SLC6A8-209ENST00000476466 COX7B2Q8TF08 81 aa8.55□□□□□ -1.04
SLC6A8-209ENST00000476466 LINC00614P0C842 121 aa8.54□□□□□ -1.04
SLC6A8-209ENST00000476466 IGLC3P0DOY3 106 aa8.54□□□□□ -1.04
SLC6A8-209ENST00000476466 LINC01549A6NIU2 74 aa8.53□□□□□ -1.04
SLC6A8-209ENST00000476466 HBDP02042 147 aa8.53□□□□□ -1.04
SLC6A8-209ENST00000476466 ZNF22P17026 224 aaPredicted RBP8.53□□□□□ -1.04
SLC6A8-209ENST00000476466 CXCL5P42830 114 aa8.53□□□□□ -1.04
SLC6A8-209ENST00000476466 CBLN2Q8IUK8 224 aa8.53□□□□□ -1.04
SLC6A8-209ENST00000476466 C22orf24Q9Y442 160 aa8.53□□□□□ -1.04
SLC6A8-209ENST00000476466 IGLV5-39A0A0G2JS06 123 aa8.52□□□□□ -1.05
SLC6A8-209ENST00000476466 KRTAP1-4P0C5Y4 121 aa8.52□□□□□ -1.05
SLC6A8-209ENST00000476466 UBE2BP63146 152 aa8.52□□□□□ -1.05
SLC6A8-209ENST00000476466 C11orf86A6NJI1 115 aa8.51□□□□□ -1.05
SLC6A8-209ENST00000476466 H0Y9J4 135 aa8.51□□□□□ -1.05
SLC6A8-209ENST00000476466 NDUFA6P56556 154 aa8.5□□□□□ -1.05
SLC6A8-209ENST00000476466 PRR26Q8N8Z3 221 aa8.5□□□□□ -1.05
SLC6A8-209ENST00000476466 RAB5BP61020 215 aa8.49□□□□□ -1.05
SLC6A8-209ENST00000476466 DIRC1Q969H9 104 aa8.49□□□□□ -1.05
SLC6A8-209ENST00000476466 H3BRM9 83 aa8.47□□□□□ -1.05
SLC6A8-209ENST00000476466 LINC00310P59036 64 aa8.47□□□□□ -1.05
SLC6A8-209ENST00000476466 MRPL55Q7Z7F7 128 aaKnown RBP8.47□□□□□ -1.05
SLC6A8-209ENST00000476466 BAGE3Q86Y29 109 aa8.47□□□□□ -1.05
SLC6A8-209ENST00000476466 Q8NDZ9 215 aa8.47□□□□□ -1.05
SLC6A8-209ENST00000476466 TP73-AS1Q9UF72 201 aa8.46□□□□□ -1.06
SLC6A8-209ENST00000476466 RNF213Q63HN8 5207 aa8.46□□□□□ -1.06
SLC6A8-209ENST00000476466 GAGE10A6NGK3 116 aa8.45□□□□□ -1.06
SLC6A8-209ENST00000476466 RPL37AP8A6NKH3 93 aa8.45□□□□□ -1.06
SLC6A8-209ENST00000476466 ATP5LO75964 103 aa8.45□□□□□ -1.06
SLC6A8-209ENST00000476466 LINC00167Q96N53 147 aa8.45□□□□□ -1.06
SLC6A8-209ENST00000476466 IGLV5-37A0A075B6J1 123 aa8.44□□□□□ -1.06
SLC6A8-209ENST00000476466 PFN2P35080 140 aa8.44□□□□□ -1.06
SLC6A8-209ENST00000476466 LINC00518Q8N0U6 118 aa8.44□□□□□ -1.06
SLC6A8-209ENST00000476466 FAM19A2Q8N3H0 131 aa8.44□□□□□ -1.06
SLC6A8-209ENST00000476466 ZNF625Q96I27 306 aaPredicted RBP8.44□□□□□ -1.06
SLC6A8-209ENST00000476466 ZNF861PO60384 105 aa8.43□□□□□ -1.06
SLC6A8-209ENST00000476466 TRGC2P03986 189 aa8.43□□□□□ -1.06
SLC6A8-209ENST00000476466 S100A12P80511 92 aa8.43□□□□□ -1.06
SLC6A8-209ENST00000476466 TMEM170BQ5T4T1 132 aa8.43□□□□□ -1.06
SLC6A8-209ENST00000476466 CHCHD1Q96BP2 118 aaKnown RBP8.43□□□□□ -1.06
SLC6A8-209ENST00000476466 NUPR1O60356 82 aa8.42□□□□□ -1.06
SLC6A8-209ENST00000476466 LBHQ53QV2 105 aaPredicted RBP8.42□□□□□ -1.06
SLC6A8-209ENST00000476466 IFI27L1Q96BM0 104 aa8.42□□□□□ -1.06
SLC6A8-209ENST00000476466 SND1-IT1Q9HBX3 110 aa8.42□□□□□ -1.06
SLC6A8-209ENST00000476466 ERG28Q9UKR5 140 aa8.42□□□□□ -1.06
SLC6A8-209ENST00000476466 CHTOPQ9Y3Y2 248 aaKnown RBP8.42□□□□□ -1.06
SLC6A8-209ENST00000476466 VPREB1P12018 145 aa8.41□□□□□ -1.06
SLC6A8-209ENST00000476466 KRTAP13-1Q8IUC0 172 aa8.41□□□□□ -1.06
SLC6A8-209ENST00000476466 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.06
SLC6A8-209ENST00000476466 TMEM223A0PJW6 202 aa8.4□□□□□ -1.06
SLC6A8-209ENST00000476466 COLCA2A8K830 154 aa8.4□□□□□ -1.06
SLC6A8-209ENST00000476466 BCE1O60756 84 aa8.4□□□□□ -1.06
SLC6A8-209ENST00000476466 IGLV1-50A0A075B6I6 118 aa8.39□□□□□ -1.07
SLC6A8-209ENST00000476466 IGKV2-28A0A075B6P5 120 aa8.39□□□□□ -1.07
SLC6A8-209ENST00000476466 IGKV2D-28P01615 120 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms