RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 DSCR9P59020 149 aa5.97□□□□□ -1.45
VAPB-205ENST00000476395 CXCL5P42830 114 aa5.96□□□□□ -1.45
VAPB-205ENST00000476395 PRR26Q8N8Z3 221 aa5.96□□□□□ -1.45
VAPB-205ENST00000476395 DEFB136Q30KP8 78 aa5.96□□□□□ -1.46
VAPB-205ENST00000476395 SERP2Q8N6R1 65 aa5.96□□□□□ -1.46
VAPB-205ENST00000476395 TRAV23DV6A0A075B6W5 121 aa5.95□□□□□ -1.46
VAPB-205ENST00000476395 DNAL4O96015 105 aa5.95□□□□□ -1.46
VAPB-205ENST00000476395 PLA2G2AP14555 144 aa5.95□□□□□ -1.46
VAPB-205ENST00000476395 SLURP1P55000 103 aa5.95□□□□□ -1.46
VAPB-205ENST00000476395 B4DSR2 109 aa5.95□□□□□ -1.46
VAPB-205ENST00000476395 RPL28P46779 137 aaKnown RBP5.95□□□□□ -1.46
VAPB-205ENST00000476395 SNRPD3P62318 126 aaKnown RBP5.95□□□□□ -1.46
VAPB-205ENST00000476395 LINC00337Q8N6G1 96 aa5.95□□□□□ -1.46
VAPB-205ENST00000476395 IGLV5-45A0A087WSX0 123 aa5.94□□□□□ -1.46
VAPB-205ENST00000476395 NDUFA1O15239 70 aa5.94□□□□□ -1.46
VAPB-205ENST00000476395 C11orf68Q9H3H3 251 aaKnown RBP5.94□□□□□ -1.46
VAPB-205ENST00000476395 Q6YL49 198 aa5.93□□□□□ -1.46
VAPB-205ENST00000476395 COPS9Q8WXC6 57 aa5.93□□□□□ -1.46
VAPB-205ENST00000476395 LAMTOR3Q9UHA4 124 aa5.93□□□□□ -1.46
VAPB-205ENST00000476395 SERP1Q9Y6X1 66 aa5.93□□□□□ -1.46
VAPB-205ENST00000476395 IGHV3OR16-12A0A075B7B8 117 aa5.93□□□□□ -1.46
VAPB-205ENST00000476395 RBM12B-AS1Q9P1G2 102 aa5.93□□□□□ -1.46
VAPB-205ENST00000476395 C20orf197Q8N268 126 aa5.93□□□□□ -1.46
VAPB-205ENST00000476395 PDZD2O15018 2839 aa5.92□□□□□ -1.46
VAPB-205ENST00000476395 PLAC8L1A1L4L8 177 aa5.92□□□□□ -1.46
VAPB-205ENST00000476395 DEFB131AP59861 70 aa5.92□□□□□ -1.46
VAPB-205ENST00000476395 C1orf158Q8N1D5 194 aa5.92□□□□□ -1.46
VAPB-205ENST00000476395 OTOGQ6ZRI0 2925 aa5.92□□□□□ -1.46
VAPB-205ENST00000476395 IGKV2-28A0A075B6P5 120 aa5.92□□□□□ -1.46
VAPB-205ENST00000476395 IGKV2D-28P01615 120 aa5.92□□□□□ -1.46
VAPB-205ENST00000476395 S100A7L2Q5SY68 101 aa5.92□□□□□ -1.46
VAPB-205ENST00000476395 GHRHP01286 108 aa5.91□□□□□ -1.46
VAPB-205ENST00000476395 INAFM2P0DMQ5 153 aa5.91□□□□□ -1.46
VAPB-205ENST00000476395 DEFB113Q30KQ7 82 aa5.91□□□□□ -1.46
VAPB-205ENST00000476395 LINC00242Q5T6M2 205 aa5.91□□□□□ -1.46
VAPB-205ENST00000476395 MAP6D1Q9H9H5 199 aa5.91□□□□□ -1.46
VAPB-205ENST00000476395 SMIM1B2RUZ4 78 aa5.91□□□□□ -1.46
VAPB-205ENST00000476395 LECT2O14960 151 aa5.91□□□□□ -1.46
VAPB-205ENST00000476395 NTM-AS1Q6ZSK4 140 aa5.91□□□□□ -1.46
VAPB-205ENST00000476395 FAM19A3Q7Z5A8 133 aa5.91□□□□□ -1.46
VAPB-205ENST00000476395 IGLV5-39A0A0G2JS06 123 aa5.91□□□□□ -1.46
VAPB-205ENST00000476395 IGHV3-53P01767 116 aa5.91□□□□□ -1.46
VAPB-205ENST00000476395 SMIM11BQ8TCY0 68 aa5.91□□□□□ -1.46
VAPB-205ENST00000476395 NDUFC2-KCTD14E9PQ53 114 aa5.9□□□□□ -1.46
VAPB-205ENST00000476395 TIMM17BO60830 172 aa5.9□□□□□ -1.46
VAPB-205ENST00000476395 SS18Q15532 418 aa5.9□□□□□ -1.46
VAPB-205ENST00000476395 LINC01356Q8N9X3 169 aa5.9□□□□□ -1.46
VAPB-205ENST00000476395 JMJD1CQ15652 2540 aa5.9□□□□□ -1.46
VAPB-205ENST00000476395 TEP1Q99973 2627 aaKnown RBP5.9□□□□□ -1.46
VAPB-205ENST00000476395 TMEM243Q9BU79 118 aa5.9□□□□□ -1.47
VAPB-205ENST00000476395 IGHV4-31P0DP07 118 aa5.9□□□□□ -1.47
VAPB-205ENST00000476395 DAD1P61803 113 aa5.9□□□□□ -1.47
VAPB-205ENST00000476395 ENHOQ6UWT2 76 aa5.9□□□□□ -1.47
VAPB-205ENST00000476395 KRTAP1-3Q8IUG1 177 aa5.9□□□□□ -1.47
VAPB-205ENST00000476395 FAM222AQ5U5X8 452 aa5.89□□□□□ -1.47
VAPB-205ENST00000476395 Q6JHZ5 121 aa5.89□□□□□ -1.47
VAPB-205ENST00000476395 IGKV3OR2-268A0A0C4DH90 116 aa5.89□□□□□ -1.47
VAPB-205ENST00000476395 GIG44P09565 113 aaPredicted RBP5.89□□□□□ -1.47
VAPB-205ENST00000476395 RBM3P98179 157 aaKnown RBP5.89□□□□□ -1.47
VAPB-205ENST00000476395 MIR7-3HGQ8N6C7 128 aa5.89□□□□□ -1.47
VAPB-205ENST00000476395 ODF3L2Q3SX64 289 aa5.88□□□□□ -1.47
VAPB-205ENST00000476395 SNURFQ9Y675 71 aa5.88□□□□□ -1.47
VAPB-205ENST00000476395 LINC00474Q9P2X8 69 aa5.88□□□□□ -1.47
VAPB-205ENST00000476395 WNK1Q9H4A3 2382 aa5.88□□□□□ -1.47
VAPB-205ENST00000476395 DEFB114Q30KQ6 69 aa5.88□□□□□ -1.47
VAPB-205ENST00000476395 TOMM7Q9P0U1 55 aa5.88□□□□□ -1.47
VAPB-205ENST00000476395 Q6ZRU5 148 aa5.87□□□□□ -1.47
VAPB-205ENST00000476395 CRPP02741 224 aa5.87□□□□□ -1.47
VAPB-205ENST00000476395 RNASE1P07998 156 aaKnown RBP5.87□□□□□ -1.47
VAPB-205ENST00000476395 Q6ZTI0 123 aa5.87□□□□□ -1.47
VAPB-205ENST00000476395 RPL36AP83881 106 aaKnown RBP5.87□□□□□ -1.47
VAPB-205ENST00000476395 RPL36ALQ969Q0 106 aaKnown RBP5.87□□□□□ -1.47
VAPB-205ENST00000476395 LYPD5Q6UWN5 251 aa5.86□□□□□ -1.47
VAPB-205ENST00000476395 FP248Q71RG6 208 aaPredicted RBP5.86□□□□□ -1.47
VAPB-205ENST00000476395 SND1-IT1Q9HBX3 110 aa5.86□□□□□ -1.47
VAPB-205ENST00000476395 PRR15Q8IV56 129 aa5.86□□□□□ -1.47
VAPB-205ENST00000476395 C4orf3Q8WVX3 66 aa5.86□□□□□ -1.47
VAPB-205ENST00000476395 XCL1P47992 114 aa5.86□□□□□ -1.47
VAPB-205ENST00000476395 C16orf95Q9H693 158 aa5.86□□□□□ -1.47
VAPB-205ENST00000476395 XCL2Q9UBD3 114 aa5.86□□□□□ -1.47
VAPB-205ENST00000476395 BAHCC1Q9P281 2608 aa5.85□□□□□ -1.47
VAPB-205ENST00000476395 M0R2N4 97 aa5.85□□□□□ -1.47
VAPB-205ENST00000476395 PRR3P79522 188 aaKnown RBP5.85□□□□□ -1.47
VAPB-205ENST00000476395 RMI2Q96E14 147 aa5.85□□□□□ -1.47
VAPB-205ENST00000476395 C8orf87E5RJ46 101 aa5.85□□□□□ -1.47
VAPB-205ENST00000476395 H7BZZ5 65 aa5.85□□□□□ -1.47
VAPB-205ENST00000476395 VWFP04275 2813 aa5.84□□□□□ -1.47
VAPB-205ENST00000476395 LYRM9A8MSI8 78 aa5.84□□□□□ -1.47
VAPB-205ENST00000476395 OBSCN-AS1Q96MR7 158 aa5.84□□□□□ -1.47
VAPB-205ENST00000476395 CCL18P55774 89 aa5.84□□□□□ -1.47
VAPB-205ENST00000476395 HIVEP1P15822 2718 aa5.84□□□□□ -1.48
VAPB-205ENST00000476395 NBEAL2Q6ZNJ1 2754 aa5.84□□□□□ -1.48
VAPB-205ENST00000476395 LINC00158P58513 81 aa5.83□□□□□ -1.48
VAPB-205ENST00000476395 CDC42SE2Q9NRR3 84 aa5.83□□□□□ -1.48
VAPB-205ENST00000476395 TRAV10A0A0B4J240 114 aa5.83□□□□□ -1.48
VAPB-205ENST00000476395 SPATA3Q8NHX4 192 aa5.83□□□□□ -1.48
VAPB-205ENST00000476395 MPLKIPQ8TAP9 179 aa5.83□□□□□ -1.48
VAPB-205ENST00000476395 FN1P02751 2386 aaKnown RBP5.83□□□□□ -1.48
VAPB-205ENST00000476395 A0A0A0MQY5 61 aa5.82□□□□□ -1.48
VAPB-205ENST00000476395 TRAV13-2A0A0B4J235 113 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms