RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 GAGE12FP0CL80 117 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 GAGE12GP0CL81 117 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 GAGE12IP0CL82 117 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 KRTAP10-11P60412 298 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 GAGE4Q13068 117 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 DEFB136Q30KP8 78 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 RNASE13Q5GAN3 156 aaKnown RBP4.81□□□□□ -1.64
UBR4-212ENST00000475973 C5orf38Q86SI9 138 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 LINC01561Q8N1V8 128 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 LINC00612Q8N6U2 182 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 CSNK1G2-AS1Q8NCQ2 148 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 CLEC2BQ92478 149 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 LINC01587Q99440 93 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 B9D2Q9BPU9 175 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 ANAPC13Q9BS18 74 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 Q9H8V8 135 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 PRKDCP78527 4128 aaKnown RBP4.81□□□□□ -1.64
UBR4-212ENST00000475973 IGHV3OR16-9A0A0B4J2B5 98 aa4.8□□□□□ -1.64
UBR4-212ENST00000475973 CMC4P56277 68 aaPredicted RBP4.8□□□□□ -1.64
UBR4-212ENST00000475973 RPL36AP83881 106 aaKnown RBP4.8□□□□□ -1.64
UBR4-212ENST00000475973 Q1RN00 199 aa4.8□□□□□ -1.64
UBR4-212ENST00000475973 LINC00643Q86TS7 51 aa4.8□□□□□ -1.64
UBR4-212ENST00000475973 RPL36ALQ969Q0 106 aaKnown RBP4.8□□□□□ -1.64
UBR4-212ENST00000475973 WNK1Q9H4A3 2382 aa4.8□□□□□ -1.64
UBR4-212ENST00000475973 IGKV2-28A0A075B6P5 120 aa4.79□□□□□ -1.64
UBR4-212ENST00000475973 IGHV3-38A0A0C4DH36 116 aa4.79□□□□□ -1.64
UBR4-212ENST00000475973 H7C2G1 150 aa4.79□□□□□ -1.64
UBR4-212ENST00000475973 IGKV2D-28P01615 120 aa4.79□□□□□ -1.64
UBR4-212ENST00000475973 CXCL5P42830 114 aa4.79□□□□□ -1.64
UBR4-212ENST00000475973 HIST1H4AP62805 103 aaKnown RBP4.79□□□□□ -1.64
UBR4-212ENST00000475973 LINC00167Q96N53 147 aa4.79□□□□□ -1.64
UBR4-212ENST00000475973 WWC2-AS2Q96NR7 200 aa4.79□□□□□ -1.64
UBR4-212ENST00000475973 TGP01266 2768 aa4.78□□□□□ -1.64
UBR4-212ENST00000475973 TRAV13-2A0A0B4J235 113 aa4.78□□□□□ -1.64
UBR4-212ENST00000475973 ATP5G1P05496 136 aa4.78□□□□□ -1.64
UBR4-212ENST00000475973 SMCR5Q8TEV8 140 aa4.78□□□□□ -1.64
UBR4-212ENST00000475973 FAM218AQ96MZ4 157 aa4.78□□□□□ -1.64
UBR4-212ENST00000475973 SORL1Q92673 2214 aa4.78□□□□□ -1.64
UBR4-212ENST00000475973 A0A087WZ39 114 aa4.77□□□□□ -1.65
UBR4-212ENST00000475973 IBA57-AS1B1ANH7 110 aa4.77□□□□□ -1.65
UBR4-212ENST00000475973 CCDC179H3BU77 68 aa4.77□□□□□ -1.65
UBR4-212ENST00000475973 TTC32Q5I0X7 151 aa4.77□□□□□ -1.65
UBR4-212ENST00000475973 DGAT2L7PQ6IED9 249 aa4.77□□□□□ -1.65
UBR4-212ENST00000475973 Q6ZTI0 123 aa4.77□□□□□ -1.65
UBR4-212ENST00000475973 A0A1B0GX51 115 aa4.76□□□□□ -1.65
UBR4-212ENST00000475973 H0YGX0 51 aa4.76□□□□□ -1.65
UBR4-212ENST00000475973 IGLV1-51P01701 117 aa4.76□□□□□ -1.65
UBR4-212ENST00000475973 FHL2Q14192 279 aa4.76□□□□□ -1.65
UBR4-212ENST00000475973 MEIG1Q5JSS6 88 aa4.76□□□□□ -1.65
UBR4-212ENST00000475973 LINC00337Q8N6G1 96 aa4.76□□□□□ -1.65
UBR4-212ENST00000475973 DYNLRB2Q8TF09 96 aa4.76□□□□□ -1.65
UBR4-212ENST00000475973 C16orf74Q96GX8 76 aa4.76□□□□□ -1.65
UBR4-212ENST00000475973 TMEM243Q9BU79 118 aa4.76□□□□□ -1.65
UBR4-212ENST00000475973 XCL2Q9UBD3 114 aa4.76□□□□□ -1.65
UBR4-212ENST00000475973 TRGV1A0A0A0MS02 117 aa4.75□□□□□ -1.65
UBR4-212ENST00000475973 TRBV6-8A0A0A6YYG3 113 aa4.75□□□□□ -1.65
UBR4-212ENST00000475973 A0A1B0GUV1 79 aa4.75□□□□□ -1.65
UBR4-212ENST00000475973 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
UBR4-212ENST00000475973 BAALC-AS2P0C853 105 aa4.75□□□□□ -1.65
UBR4-212ENST00000475973 INAFM2P0DMQ5 153 aa4.75□□□□□ -1.65
UBR4-212ENST00000475973 STHQ8IWL8 128 aa4.75□□□□□ -1.65
UBR4-212ENST00000475973 KIR2DL5BQ8NHK3 375 aa4.75□□□□□ -1.65
UBR4-212ENST00000475973 COX7B2Q8TF08 81 aa4.75□□□□□ -1.65
UBR4-212ENST00000475973 LOC100131303A0A0U1RQF7 123 aa4.74□□□□□ -1.65
UBR4-212ENST00000475973 HTN1P15515 57 aa4.74□□□□□ -1.65
UBR4-212ENST00000475973 CCL18P55774 89 aa4.74□□□□□ -1.65
UBR4-212ENST00000475973 NPC2P61916 151 aa4.74□□□□□ -1.65
UBR4-212ENST00000475973 SS18Q15532 418 aa4.74□□□□□ -1.65
UBR4-212ENST00000475973 LYPD5Q6UWN5 251 aa4.74□□□□□ -1.65
UBR4-212ENST00000475973 C2orf48Q96LS8 159 aa4.74□□□□□ -1.65
UBR4-212ENST00000475973 TMEM126AQ9H061 195 aa4.74□□□□□ -1.65
UBR4-212ENST00000475973 DNAH3Q8TD57 4116 aa4.74□□□□□ -1.65
UBR4-212ENST00000475973 IGLV4-60A0A075B6I1 120 aa4.73□□□□□ -1.65
UBR4-212ENST00000475973 TRAV13-1A0A0B4J241 112 aa4.73□□□□□ -1.65
UBR4-212ENST00000475973 IGHV4-28A0A0C4DH34 117 aa4.73□□□□□ -1.65
UBR4-212ENST00000475973 C3orf84H3BNL1 204 aa4.73□□□□□ -1.65
UBR4-212ENST00000475973 NANOS2P60321 138 aaKnown RBP4.73□□□□□ -1.65
UBR4-212ENST00000475973 MIR7-3HGQ8N6C7 128 aa4.73□□□□□ -1.65
UBR4-212ENST00000475973 SMIM11BQ8TCY0 68 aa4.73□□□□□ -1.65
UBR4-212ENST00000475973 KLK5Q9Y337 293 aaPredicted RBP4.73□□□□□ -1.65
UBR4-212ENST00000475973 LINC00959A0A1B0GUT2 108 aa4.72□□□□□ -1.65
UBR4-212ENST00000475973 NDUFC2O95298 119 aa4.72□□□□□ -1.65
UBR4-212ENST00000475973 KIAA0087Q14695 138 aa4.72□□□□□ -1.65
UBR4-212ENST00000475973 XP32Q5T750 250 aa4.72□□□□□ -1.65
UBR4-212ENST00000475973 Q8IZM0 81 aa4.72□□□□□ -1.65
UBR4-212ENST00000475973 LINC00526Q96FQ7 95 aa4.72□□□□□ -1.65
UBR4-212ENST00000475973 SND1-IT1Q9HBX3 110 aa4.72□□□□□ -1.65
UBR4-212ENST00000475973 NOP10Q9NPE3 64 aaKnown RBP4.72□□□□□ -1.65
UBR4-212ENST00000475973 SS18L2Q9UHA2 77 aa4.72□□□□□ -1.65
UBR4-212ENST00000475973 NOTCH3Q9UM47 2321 aa4.71□□□□□ -1.66
UBR4-212ENST00000475973 CRPP02741 224 aa4.71□□□□□ -1.66
UBR4-212ENST00000475973 Q6JHZ5 121 aa4.71□□□□□ -1.66
UBR4-212ENST00000475973 C3orf22Q8N5N4 141 aa4.71□□□□□ -1.66
UBR4-212ENST00000475973 MUC7Q8TAX7 377 aa4.71□□□□□ -1.66
UBR4-212ENST00000475973 A0A087WYN8 130 aa4.7□□□□□ -1.66
UBR4-212ENST00000475973 UQCRQO14949 82 aa4.7□□□□□ -1.66
UBR4-212ENST00000475973 IGHV4-30-4P0DP06 118 aa4.7□□□□□ -1.66
UBR4-212ENST00000475973 CRYGAP11844 174 aa4.7□□□□□ -1.66
UBR4-212ENST00000475973 C9orf129Q5T035 196 aaKnown RBP4.7□□□□□ -1.66
UBR4-212ENST00000475973 CHCHD5Q9BSY4 110 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms