RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 LINC00614P0C842 121 aa8.19□□□□□ -1.1
NIPAL3-206ENST00000475663 NDUFA6P56556 154 aa8.19□□□□□ -1.1
NIPAL3-206ENST00000475663 HERVK_113P63121 156 aa8.19□□□□□ -1.1
NIPAL3-206ENST00000475663 PACRGQ96M98 296 aaPredicted RBP8.19□□□□□ -1.1
NIPAL3-206ENST00000475663 F8WDY8 70 aa8.18□□□□□ -1.1
NIPAL3-206ENST00000475663 C6orf226Q5I0X4 101 aa8.18□□□□□ -1.1
NIPAL3-206ENST00000475663 LINC01561Q8N1V8 128 aa8.18□□□□□ -1.1
NIPAL3-206ENST00000475663 SPINK8P0C7L1 97 aa8.17□□□□□ -1.1
NIPAL3-206ENST00000475663 CKS1BP61024 79 aa8.17□□□□□ -1.1
NIPAL3-206ENST00000475663 SEC11AP67812 179 aa8.17□□□□□ -1.1
NIPAL3-206ENST00000475663 PMVKQ15126 192 aa8.17□□□□□ -1.1
NIPAL3-206ENST00000475663 FAM19A5Q7Z5A7 132 aaPredicted RBP8.17□□□□□ -1.1
NIPAL3-206ENST00000475663 TRBV30A0A0K0K1B3 111 aa8.16□□□□□ -1.1
NIPAL3-206ENST00000475663 TINCRA0A1B0GVN0 87 aa8.16□□□□□ -1.1
NIPAL3-206ENST00000475663 SMIM1B2RUZ4 78 aa8.16□□□□□ -1.1
NIPAL3-206ENST00000475663 TLX1NBP0CAT3 122 aa8.16□□□□□ -1.1
NIPAL3-206ENST00000475663 KRTAP7-1Q8IUC3 87 aa8.16□□□□□ -1.1
NIPAL3-206ENST00000475663 OXTP01178 125 aa8.15□□□□□ -1.1
NIPAL3-206ENST00000475663 HBDP02042 147 aa8.15□□□□□ -1.1
NIPAL3-206ENST00000475663 KRTAP11-1Q8IUC1 163 aa8.15□□□□□ -1.1
NIPAL3-206ENST00000475663 Q8IZM0 81 aa8.15□□□□□ -1.1
NIPAL3-206ENST00000475663 LINC01549A6NIU2 74 aa8.14□□□□□ -1.11
NIPAL3-206ENST00000475663 PDZD11Q5EBL8 140 aa8.14□□□□□ -1.11
NIPAL3-206ENST00000475663 C9orf129Q5T035 196 aaKnown RBP8.14□□□□□ -1.11
NIPAL3-206ENST00000475663 IGLV5-45A0A087WSX0 123 aa8.13□□□□□ -1.11
NIPAL3-206ENST00000475663 NDUFC2-KCTD14E9PQ53 114 aa8.13□□□□□ -1.11
NIPAL3-206ENST00000475663 COX7B2Q8TF08 81 aa8.13□□□□□ -1.11
NIPAL3-206ENST00000475663 XAGE1AQ9HD64 81 aa8.13□□□□□ -1.11
NIPAL3-206ENST00000475663 PSORS1C2Q9UIG4 136 aa8.13□□□□□ -1.11
NIPAL3-206ENST00000475663 TRGC2P03986 189 aa8.12□□□□□ -1.11
NIPAL3-206ENST00000475663 RAB5BP61020 215 aa8.12□□□□□ -1.11
NIPAL3-206ENST00000475663 F8VRH5 84 aa8.11□□□□□ -1.11
NIPAL3-206ENST00000475663 MT1HL1P0DM35 61 aa8.11□□□□□ -1.11
NIPAL3-206ENST00000475663 IGLC3P0DOY3 106 aa8.11□□□□□ -1.11
NIPAL3-206ENST00000475663 ZNF22P17026 224 aaPredicted RBP8.11□□□□□ -1.11
NIPAL3-206ENST00000475663 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
NIPAL3-206ENST00000475663 BAGE3Q86Y29 109 aa8.11□□□□□ -1.11
NIPAL3-206ENST00000475663 C11orf86A6NJI1 115 aa8.1□□□□□ -1.11
NIPAL3-206ENST00000475663 M0QXV9 152 aa8.1□□□□□ -1.11
NIPAL3-206ENST00000475663 ODF1Q14990 250 aa8.1□□□□□ -1.11
NIPAL3-206ENST00000475663 C1orf137Q5JT78 98 aa8.1□□□□□ -1.11
NIPAL3-206ENST00000475663 FAM19A2Q8N3H0 131 aa8.1□□□□□ -1.11
NIPAL3-206ENST00000475663 ATP5LO75964 103 aa8.09□□□□□ -1.11
NIPAL3-206ENST00000475663 SRSF9Q13242 221 aaKnown RBP eCLIP8.09□□□□□ -1.11
NIPAL3-206ENST00000475663 H3BRM9 83 aa8.08□□□□□ -1.12
NIPAL3-206ENST00000475663 CXCL5P42830 114 aa8.08□□□□□ -1.12
NIPAL3-206ENST00000475663 CHCHD1Q96BP2 118 aaKnown RBP8.08□□□□□ -1.12
NIPAL3-206ENST00000475663 SCO1O75880 301 aa8.07□□□□□ -1.12
NIPAL3-206ENST00000475663 UBE2BP63146 152 aa8.07□□□□□ -1.12
NIPAL3-206ENST00000475663 TMEM170BQ5T4T1 132 aa8.07□□□□□ -1.12
NIPAL3-206ENST00000475663 SPINK6Q6UWN8 80 aa8.07□□□□□ -1.12
NIPAL3-206ENST00000475663 CHTOPQ9Y3Y2 248 aaKnown RBP8.07□□□□□ -1.12
NIPAL3-206ENST00000475663 IGLV5-39A0A0G2JS06 123 aa8.06□□□□□ -1.12
NIPAL3-206ENST00000475663 COLCA2A8K830 154 aa8.06□□□□□ -1.12
NIPAL3-206ENST00000475663 HSBP1O75506 76 aa8.06□□□□□ -1.12
NIPAL3-206ENST00000475663 LINC00310P59036 64 aa8.06□□□□□ -1.12
NIPAL3-206ENST00000475663 IFI27L1Q96BM0 104 aa8.06□□□□□ -1.12
NIPAL3-206ENST00000475663 ZNF625Q96I27 306 aaPredicted RBP8.06□□□□□ -1.12
NIPAL3-206ENST00000475663 H0Y8G0 127 aa8.05□□□□□ -1.12
NIPAL3-206ENST00000475663 NUPR1O60356 82 aa8.05□□□□□ -1.12
NIPAL3-206ENST00000475663 SERF1AO75920 110 aa8.05□□□□□ -1.12
NIPAL3-206ENST00000475663 PFN2P35080 140 aa8.05□□□□□ -1.12
NIPAL3-206ENST00000475663 C22orf24Q9Y442 160 aa8.05□□□□□ -1.12
NIPAL3-206ENST00000475663 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
NIPAL3-206ENST00000475663 LINC01600Q96MT4 127 aa8.03□□□□□ -1.12
NIPAL3-206ENST00000475663 GAGE10A6NGK3 116 aa8.02□□□□□ -1.13
NIPAL3-206ENST00000475663 REG3GQ6UW15 175 aa8.02□□□□□ -1.13
NIPAL3-206ENST00000475663 FABP4P15090 132 aa8.01□□□□□ -1.13
NIPAL3-206ENST00000475663 HMCN2Q8NDA2 5059 aa8.01□□□□□ -1.13
NIPAL3-206ENST00000475663 TRAV12-1A0A0B4J245 112 aa8□□□□□ -1.13
NIPAL3-206ENST00000475663 A0A0U1RRA0 63 aa8□□□□□ -1.13
NIPAL3-206ENST00000475663 TMEM223A0PJW6 202 aa8□□□□□ -1.13
NIPAL3-206ENST00000475663 RPL37AP8A6NKH3 93 aa8□□□□□ -1.13
NIPAL3-206ENST00000475663 MRPL55Q7Z7F7 128 aaKnown RBP8□□□□□ -1.13
NIPAL3-206ENST00000475663 LEPROTL1O95214 131 aa7.99□□□□□ -1.13
NIPAL3-206ENST00000475663 LINC00167Q96N53 147 aa7.99□□□□□ -1.13
NIPAL3-206ENST00000475663 ERG28Q9UKR5 140 aa7.99□□□□□ -1.13
NIPAL3-206ENST00000475663 TNXBP22105 4242 aa7.98□□□□□ -1.13
NIPAL3-206ENST00000475663 PMCHL2Q9BQD1 86 aa7.98□□□□□ -1.13
NIPAL3-206ENST00000475663 KRTAP10-8P60410 259 aa7.97□□□□□ -1.13
NIPAL3-206ENST00000475663 LBHQ53QV2 105 aaPredicted RBP7.97□□□□□ -1.13
NIPAL3-206ENST00000475663 Q8NDZ9 215 aa7.97□□□□□ -1.13
NIPAL3-206ENST00000475663 DIRC1Q969H9 104 aa7.97□□□□□ -1.13
NIPAL3-206ENST00000475663 SND1-IT1Q9HBX3 110 aa7.97□□□□□ -1.13
NIPAL3-206ENST00000475663 H0Y9J4 135 aa7.96□□□□□ -1.14
NIPAL3-206ENST00000475663 NKAPP1Q8N9T2 125 aa7.96□□□□□ -1.14
NIPAL3-206ENST00000475663 PLA2G2DQ9UNK4 145 aa7.96□□□□□ -1.14
NIPAL3-206ENST00000475663 LINC00158P58513 81 aa7.95□□□□□ -1.14
NIPAL3-206ENST00000475663 PRR26Q8N8Z3 221 aa7.95□□□□□ -1.14
NIPAL3-206ENST00000475663 TP73-AS1Q9UF72 201 aa7.95□□□□□ -1.14
NIPAL3-206ENST00000475663 IGKV2-28A0A075B6P5 120 aa7.94□□□□□ -1.14
NIPAL3-206ENST00000475663 HIST1H2BKO60814 126 aa7.94□□□□□ -1.14
NIPAL3-206ENST00000475663 IGKV2D-28P01615 120 aa7.94□□□□□ -1.14
NIPAL3-206ENST00000475663 HIST1H2BJP06899 126 aa7.94□□□□□ -1.14
NIPAL3-206ENST00000475663 VPREB1P12018 145 aa7.94□□□□□ -1.14
NIPAL3-206ENST00000475663 HIST1H2BOP23527 126 aa7.94□□□□□ -1.14
NIPAL3-206ENST00000475663 HIST1H2BBP33778 126 aa7.94□□□□□ -1.14
NIPAL3-206ENST00000475663 HIST1H2BDP58876 126 aa7.94□□□□□ -1.14
NIPAL3-206ENST00000475663 TSPEAR-AS2P59090 65 aa7.94□□□□□ -1.14
NIPAL3-206ENST00000475663 HIST1H2BCP62807 126 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms