RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 IGLV4-3A0A075B6K6 122 aa8.52□□□□□ -1.05
U2AF1-209ENST00000475639 EBI3Q14213 229 aa8.52□□□□□ -1.05
U2AF1-209ENST00000475639 WFDC10AQ9H1F0 79 aa8.52□□□□□ -1.05
U2AF1-209ENST00000475639 TRBV6-5A0A0K0K1A5 114 aa8.51□□□□□ -1.05
U2AF1-209ENST00000475639 M0R378 163 aa8.51□□□□□ -1.05
U2AF1-209ENST00000475639 TSHBP01222 138 aa8.51□□□□□ -1.05
U2AF1-209ENST00000475639 LINC00208Q96KT6 92 aa8.51□□□□□ -1.05
U2AF1-209ENST00000475639 ZFP36P26651 326 aaKnown RBP8.51□□□□□ -1.05
U2AF1-209ENST00000475639 TRBV6-8A0A0A6YYG3 113 aa8.5□□□□□ -1.05
U2AF1-209ENST00000475639 IGKV2-28A0A075B6P5 120 aa8.5□□□□□ -1.05
U2AF1-209ENST00000475639 IGKV2D-28P01615 120 aa8.5□□□□□ -1.05
U2AF1-209ENST00000475639 HRCT1Q6UXD1 115 aa8.5□□□□□ -1.05
U2AF1-209ENST00000475639 TRBV7-6A0A0J9YX20 115 aa8.5□□□□□ -1.05
U2AF1-209ENST00000475639 BOD1L1Q8NFC6 3051 aa8.5□□□□□ -1.05
U2AF1-209ENST00000475639 IGF2-ASQ6U949 168 aa8.5□□□□□ -1.05
U2AF1-209ENST00000475639 DCANP1Q8TF63 244 aa8.5□□□□□ -1.05
U2AF1-209ENST00000475639 WIPF1O43516 503 aa8.49□□□□□ -1.05
U2AF1-209ENST00000475639 TRBV6-4A0A1B0GX49 114 aa8.48□□□□□ -1.05
U2AF1-209ENST00000475639 K7EQG2 157 aa8.48□□□□□ -1.05
U2AF1-209ENST00000475639 LST1O00453 97 aa8.48□□□□□ -1.05
U2AF1-209ENST00000475639 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.48□□□□□ -1.05
U2AF1-209ENST00000475639 TRAV7A0A075B6U4 112 aa8.48□□□□□ -1.05
U2AF1-209ENST00000475639 SOSTDC1Q6X4U4 206 aa8.48□□□□□ -1.05
U2AF1-209ENST00000475639 CELA1Q9UNI1 258 aa8.47□□□□□ -1.05
U2AF1-209ENST00000475639 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
U2AF1-209ENST00000475639 Q6JHZ5 121 aa8.47□□□□□ -1.05
U2AF1-209ENST00000475639 LINC00526Q96FQ7 95 aa8.47□□□□□ -1.05
U2AF1-209ENST00000475639 NTM-AS1Q6ZSK4 140 aa8.46□□□□□ -1.05
U2AF1-209ENST00000475639 MUC7Q8TAX7 377 aa8.46□□□□□ -1.05
U2AF1-209ENST00000475639 PYGO1Q9Y3Y4 419 aa8.46□□□□□ -1.05
U2AF1-209ENST00000475639 IGIPA6NJ69 53 aa8.46□□□□□ -1.06
U2AF1-209ENST00000475639 A6NDX4 124 aa8.45□□□□□ -1.06
U2AF1-209ENST00000475639 FAM30AQ9NZY2 134 aa8.45□□□□□ -1.06
U2AF1-209ENST00000475639 COL27A1Q8IZC6 1860 aaPredicted RBP8.44□□□□□ -1.06
U2AF1-209ENST00000475639 MUC3AQ02505 3323 aa8.44□□□□□ -1.06
U2AF1-209ENST00000475639 ZNF73O43830 326 aaPredicted RBP8.44□□□□□ -1.06
U2AF1-209ENST00000475639 SMCR5Q8TEV8 140 aa8.44□□□□□ -1.06
U2AF1-209ENST00000475639 X6R8D5 127 aa8.44□□□□□ -1.06
U2AF1-209ENST00000475639 TRAV10A0A0B4J240 114 aa8.44□□□□□ -1.06
U2AF1-209ENST00000475639 M0QY20 66 aa8.44□□□□□ -1.06
U2AF1-209ENST00000475639 DEFB114Q30KQ6 69 aa8.44□□□□□ -1.06
U2AF1-209ENST00000475639 IGLV9-49A0A0B4J1Y8 123 aa8.43□□□□□ -1.06
U2AF1-209ENST00000475639 USP9YO00507 2555 aaPredicted RBP8.43□□□□□ -1.06
U2AF1-209ENST00000475639 PLA2G2CQ5R387 149 aa8.43□□□□□ -1.06
U2AF1-209ENST00000475639 ADGRG4Q8IZF6 3080 aa8.43□□□□□ -1.06
U2AF1-209ENST00000475639 PRR9Q5T870 116 aa8.42□□□□□ -1.06
U2AF1-209ENST00000475639 C22orf34Q6ZV56 151 aa8.42□□□□□ -1.06
U2AF1-209ENST00000475639 IGFL2Q6UWQ7 119 aa8.42□□□□□ -1.06
U2AF1-209ENST00000475639 Q6ZSV7 163 aa8.42□□□□□ -1.06
U2AF1-209ENST00000475639 SMIM11BQ8TCY0 68 aa8.41□□□□□ -1.06
U2AF1-209ENST00000475639 CCDC140Q96MF4 163 aa8.41□□□□□ -1.06
U2AF1-209ENST00000475639 LINC00474Q9P2X8 69 aa8.41□□□□□ -1.06
U2AF1-209ENST00000475639 RPS28P62857 69 aaKnown RBP8.41□□□□□ -1.06
U2AF1-209ENST00000475639 CYSTM1Q9H1C7 97 aa8.41□□□□□ -1.06
U2AF1-209ENST00000475639 ZNF580Q9UK33 172 aa8.41□□□□□ -1.06
U2AF1-209ENST00000475639 DNAJC9-AS1A6NH13 148 aa8.41□□□□□ -1.06
U2AF1-209ENST00000475639 C2orf48Q96LS8 159 aa8.41□□□□□ -1.06
U2AF1-209ENST00000475639 NANOS2P60321 138 aaKnown RBP8.4□□□□□ -1.06
U2AF1-209ENST00000475639 ESRGQ1W209 222 aa8.4□□□□□ -1.06
U2AF1-209ENST00000475639 A0A1W2PNU3 283 aaPredicted RBP8.4□□□□□ -1.07
U2AF1-209ENST00000475639 PLAC8L1A1L4L8 177 aa8.4□□□□□ -1.07
U2AF1-209ENST00000475639 IGF1P05019 195 aa8.4□□□□□ -1.07
U2AF1-209ENST00000475639 SVEP1Q4LDE5 3571 aa8.4□□□□□ -1.07
U2AF1-209ENST00000475639 C10orf25Q5T742 122 aa8.39□□□□□ -1.07
U2AF1-209ENST00000475639 CRYGAP11844 174 aa8.39□□□□□ -1.07
U2AF1-209ENST00000475639 LINC01547P58512 204 aaPredicted RBP8.39□□□□□ -1.07
U2AF1-209ENST00000475639 LELP1Q5T871 98 aa8.39□□□□□ -1.07
U2AF1-209ENST00000475639 COX17Q14061 63 aa8.39□□□□□ -1.07
U2AF1-209ENST00000475639 C1orf137Q5JT78 98 aa8.39□□□□□ -1.07
U2AF1-209ENST00000475639 LITAFQ99732 161 aa8.39□□□□□ -1.07
U2AF1-209ENST00000475639 SPINK1P00995 79 aa8.38□□□□□ -1.07
U2AF1-209ENST00000475639 RPL28P46779 137 aaKnown RBP8.38□□□□□ -1.07
U2AF1-209ENST00000475639 BBC3Q96PG8 261 aaPredicted RBP8.38□□□□□ -1.07
U2AF1-209ENST00000475639 PSPHP1O15172 72 aa8.38□□□□□ -1.07
U2AF1-209ENST00000475639 RELNP78509 3460 aa8.38□□□□□ -1.07
U2AF1-209ENST00000475639 KPRPQ5T749 579 aaPredicted RBP8.38□□□□□ -1.07
U2AF1-209ENST00000475639 PIEZO2Q9H5I5 2752 aa8.38□□□□□ -1.07
U2AF1-209ENST00000475639 LINC00959A0A1B0GUT2 108 aa8.38□□□□□ -1.07
U2AF1-209ENST00000475639 RPL37AP8A6NKH3 93 aa8.38□□□□□ -1.07
U2AF1-209ENST00000475639 A8MZ25 164 aa8.37□□□□□ -1.07
U2AF1-209ENST00000475639 OXTP01178 125 aa8.37□□□□□ -1.07
U2AF1-209ENST00000475639 POLR2KP53803 58 aaKnown RBP8.37□□□□□ -1.07
U2AF1-209ENST00000475639 FBXL19-AS1Q494R0 122 aa8.37□□□□□ -1.07
U2AF1-209ENST00000475639 POLQO75417 2590 aa8.37□□□□□ -1.07
U2AF1-209ENST00000475639 LOC100131303A0A0U1RQF7 123 aa8.36□□□□□ -1.07
U2AF1-209ENST00000475639 ADORA2A-AS1P86434 159 aa8.36□□□□□ -1.07
U2AF1-209ENST00000475639 BEAN1Q3B7T3 259 aa8.36□□□□□ -1.07
U2AF1-209ENST00000475639 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
U2AF1-209ENST00000475639 Q8N3U1 123 aa8.36□□□□□ -1.07
U2AF1-209ENST00000475639 ODF3BA8MYP8 253 aa8.36□□□□□ -1.07
U2AF1-209ENST00000475639 LMO4P61968 165 aa8.36□□□□□ -1.07
U2AF1-209ENST00000475639 PCOTHQ58A44 107 aa8.35□□□□□ -1.07
U2AF1-209ENST00000475639 Q8IZM0 81 aa8.35□□□□□ -1.07
U2AF1-209ENST00000475639 LINC00315P59091 139 aa8.35□□□□□ -1.07
U2AF1-209ENST00000475639 C4orf26Q17RF5 130 aa8.35□□□□□ -1.07
U2AF1-209ENST00000475639 SERTAD4-AS1Q5TG53 156 aa8.35□□□□□ -1.07
U2AF1-209ENST00000475639 LAMA5O15230 3695 aa8.35□□□□□ -1.07
U2AF1-209ENST00000475639 VPREB1P12018 145 aa8.35□□□□□ -1.07
U2AF1-209ENST00000475639 LINC00482Q8N8I6 264 aa8.35□□□□□ -1.07
U2AF1-209ENST00000475639 KIF25-AS1Q9Y6Z4 181 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms