RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 LINC01561Q8N1V8 128 aa13.58□□□□□ -0.24
EDEM3-206ENST00000474725 C1orf43Q9BWL3 253 aa13.57□□□□□ -0.24
EDEM3-206ENST00000474725 IGKV2D-24A0A075B6R9 120 aa13.56□□□□□ -0.24
EDEM3-206ENST00000474725 LYSTQ99698 3801 aa13.56□□□□□ -0.24
EDEM3-206ENST00000474725 MALP21145 153 aa13.56□□□□□ -0.24
EDEM3-206ENST00000474725 KRTAP1-5Q9BYS1 174 aa13.56□□□□□ -0.24
EDEM3-206ENST00000474725 TOMM7Q9P0U1 55 aa13.56□□□□□ -0.24
EDEM3-206ENST00000474725 TMEM238C9JI98 176 aa13.55□□□□□ -0.24
EDEM3-206ENST00000474725 COX7B2Q8TF08 81 aa13.55□□□□□ -0.24
EDEM3-206ENST00000474725 TENM2Q9NT68 2774 aa13.55□□□□□ -0.24
EDEM3-206ENST00000474725 NDUFA12Q9UI09 145 aa13.54□□□□□ -0.24
EDEM3-206ENST00000474725 CASC10Q5T4H9 136 aa13.54□□□□□ -0.24
EDEM3-206ENST00000474725 PGPEP1Q9NXJ5 209 aa13.54□□□□□ -0.24
EDEM3-206ENST00000474725 A0A0J9YXY3 114 aa13.52□□□□□ -0.24
EDEM3-206ENST00000474725 OCIAD2Q56VL3 154 aa13.52□□□□□ -0.25
EDEM3-206ENST00000474725 APOMO95445 188 aa13.51□□□□□ -0.25
EDEM3-206ENST00000474725 NDUFA1O15239 70 aa13.51□□□□□ -0.25
EDEM3-206ENST00000474725 C3orf84H3BNL1 204 aa13.5□□□□□ -0.25
EDEM3-206ENST00000474725 RPL24P83731 157 aaKnown RBP13.5□□□□□ -0.25
EDEM3-206ENST00000474725 C6orf226Q5I0X4 101 aa13.49□□□□□ -0.25
EDEM3-206ENST00000474725 ZNF625Q96I27 306 aaPredicted RBP13.49□□□□□ -0.25
EDEM3-206ENST00000474725 DNAH1Q9P2D7 4330 aa13.49□□□□□ -0.25
EDEM3-206ENST00000474725 NBDYA0A0U1RRE5 68 aa13.49□□□□□ -0.25
EDEM3-206ENST00000474725 PRSS2P07478 247 aa13.49□□□□□ -0.25
EDEM3-206ENST00000474725 CFC1BP0CG36 223 aa13.49□□□□□ -0.25
EDEM3-206ENST00000474725 CFC1P0CG37 223 aa13.49□□□□□ -0.25
EDEM3-206ENST00000474725 KIAA0087Q14695 138 aa13.49□□□□□ -0.25
EDEM3-206ENST00000474725 Q8IZM0 81 aa13.49□□□□□ -0.25
EDEM3-206ENST00000474725 RMI2Q96E14 147 aa13.49□□□□□ -0.25
EDEM3-206ENST00000474725 K7ERU9 68 aa13.48□□□□□ -0.25
EDEM3-206ENST00000474725 TSPAN13O95857 204 aa13.48□□□□□ -0.25
EDEM3-206ENST00000474725 A4D1N5 150 aa13.46□□□□□ -0.25
EDEM3-206ENST00000474725 TTC32Q5I0X7 151 aa13.46□□□□□ -0.25
EDEM3-206ENST00000474725 LYRM7Q5U5X0 104 aa13.46□□□□□ -0.25
EDEM3-206ENST00000474725 MUSTN1Q8IVN3 82 aa13.46□□□□□ -0.25
EDEM3-206ENST00000474725 LITAFQ99732 161 aa13.46□□□□□ -0.25
EDEM3-206ENST00000474725 PRO1854Q9UHT4 67 aa13.46□□□□□ -0.25
EDEM3-206ENST00000474725 F8W1H4 67 aa13.45□□□□□ -0.26
EDEM3-206ENST00000474725 SPAG11BQ08648 103 aa13.45□□□□□ -0.26
EDEM3-206ENST00000474725 SPANXDQ9BXN6 97 aa13.45□□□□□ -0.26
EDEM3-206ENST00000474725 SPANXCQ9NY87 97 aa13.45□□□□□ -0.26
EDEM3-206ENST00000474725 VPS13DQ5THJ4 4388 aa13.45□□□□□ -0.26
EDEM3-206ENST00000474725 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.45□□□□□ -0.26
EDEM3-206ENST00000474725 H3BMG7 143 aa13.45□□□□□ -0.26
EDEM3-206ENST00000474725 CFAP161Q6P656 301 aa13.45□□□□□ -0.26
EDEM3-206ENST00000474725 C15orf56Q8N910 161 aa13.45□□□□□ -0.26
EDEM3-206ENST00000474725 LINC00526Q96FQ7 95 aa13.45□□□□□ -0.26
EDEM3-206ENST00000474725 A0A0B4J2C4 111 aa13.44□□□□□ -0.26
EDEM3-206ENST00000474725 C2orf82Q6UX34 121 aa13.44□□□□□ -0.26
EDEM3-206ENST00000474725 C6orf223Q8N319 242 aa13.43□□□□□ -0.26
EDEM3-206ENST00000474725 CBY1Q9Y3M2 126 aa13.43□□□□□ -0.26
EDEM3-206ENST00000474725 M0R2N4 97 aa13.43□□□□□ -0.26
EDEM3-206ENST00000474725 TIMM17BO60830 172 aa13.43□□□□□ -0.26
EDEM3-206ENST00000474725 LY6G6CO95867 125 aa13.43□□□□□ -0.26
EDEM3-206ENST00000474725 HERV-K104P63124 156 aa13.43□□□□□ -0.26
EDEM3-206ENST00000474725 HIGD2BQ4VC39 106 aa13.43□□□□□ -0.26
EDEM3-206ENST00000474725 CKS1BP61024 79 aa13.42□□□□□ -0.26
EDEM3-206ENST00000474725 LOC107984156A0A0G2JMH3 177 aa13.41□□□□□ -0.26
EDEM3-206ENST00000474725 ARL17AQ8IVW1 177 aa13.41□□□□□ -0.26
EDEM3-206ENST00000474725 LINC00476Q8WZB0 136 aa13.4□□□□□ -0.26
EDEM3-206ENST00000474725 CXCL5P42830 114 aa13.39□□□□□ -0.27
EDEM3-206ENST00000474725 MEIG1Q5JSS6 88 aa13.39□□□□□ -0.27
EDEM3-206ENST00000474725 ADAMTSL4-AS1Q5T5F5 129 aa13.39□□□□□ -0.27
EDEM3-206ENST00000474725 NTN5Q8WTR8 489 aaPredicted RBP13.39□□□□□ -0.27
EDEM3-206ENST00000474725 A0A0U1RRA0 63 aa13.39□□□□□ -0.27
EDEM3-206ENST00000474725 ZNF561-AS1K7EIQ3 104 aa13.39□□□□□ -0.27
EDEM3-206ENST00000474725 RNF151Q2KHN1 245 aa13.39□□□□□ -0.27
EDEM3-206ENST00000474725 SFTA2Q6UW10 78 aa13.39□□□□□ -0.27
EDEM3-206ENST00000474725 CIRBPQ14011 172 aaKnown RBP13.38□□□□□ -0.27
EDEM3-206ENST00000474725 UNQ6190/PRO20217Q6UXQ8 127 aa13.38□□□□□ -0.27
EDEM3-206ENST00000474725 USP17L23D6RBM5 183 aa13.37□□□□□ -0.27
EDEM3-206ENST00000474725 C10orf25Q5T742 122 aa13.37□□□□□ -0.27
EDEM3-206ENST00000474725 TRBV20-1A0A075B6N2 111 aa13.37□□□□□ -0.27
EDEM3-206ENST00000474725 GVQW2A0A096LPI5 108 aaPredicted RBP13.37□□□□□ -0.27
EDEM3-206ENST00000474725 EIF4EBP3O60516 100 aaPredicted RBP13.37□□□□□ -0.27
EDEM3-206ENST00000474725 IFITM1P13164 125 aa13.37□□□□□ -0.27
EDEM3-206ENST00000474725 ERG28Q9UKR5 140 aa13.37□□□□□ -0.27
EDEM3-206ENST00000474725 LECT2O14960 151 aa13.36□□□□□ -0.27
EDEM3-206ENST00000474725 PSCAO43653 123 aa13.36□□□□□ -0.27
EDEM3-206ENST00000474725 Q6ZR54 194 aa13.36□□□□□ -0.27
EDEM3-206ENST00000474725 PSMB2P49721 201 aa13.35□□□□□ -0.27
EDEM3-206ENST00000474725 WFDC2Q14508 124 aa13.35□□□□□ -0.27
EDEM3-206ENST00000474725 DAND5Q8N907 189 aa13.35□□□□□ -0.27
EDEM3-206ENST00000474725 PRO0461Q9UI25 63 aa13.35□□□□□ -0.27
EDEM3-206ENST00000474725 PFN2P35080 140 aa13.33□□□□□ -0.28
EDEM3-206ENST00000474725 C2orf48Q96LS8 159 aa13.33□□□□□ -0.28
EDEM3-206ENST00000474725 CAMK2N2Q96S95 79 aa13.33□□□□□ -0.28
EDEM3-206ENST00000474725 VPS25Q9BRG1 176 aa13.33□□□□□ -0.28
EDEM3-206ENST00000474725 SCGB1C2P0DMR2 95 aa13.33□□□□□ -0.28
EDEM3-206ENST00000474725 LINC00158P58513 81 aa13.33□□□□□ -0.28
EDEM3-206ENST00000474725 C9orf116Q5BN46 136 aaPredicted RBP13.33□□□□□ -0.28
EDEM3-206ENST00000474725 Q6ZRN7 208 aaPredicted RBP13.33□□□□□ -0.28
EDEM3-206ENST00000474725 TCL1BO95988 128 aa13.31□□□□□ -0.28
EDEM3-206ENST00000474725 NPC2P61916 151 aa13.31□□□□□ -0.28
EDEM3-206ENST00000474725 COPS9Q8WXC6 57 aa13.31□□□□□ -0.28
EDEM3-206ENST00000474725 Q1RN00 199 aa13.31□□□□□ -0.28
EDEM3-206ENST00000474725 C6orf48Q9UBA6 75 aa13.31□□□□□ -0.28
EDEM3-206ENST00000474725 Q6ZRU5 148 aa13.3□□□□□ -0.28
EDEM3-206ENST00000474725 MTURNQ8N3F0 131 aa13.3□□□□□ -0.28
EDEM3-206ENST00000474725 H7C2G1 150 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms