RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 DAND5Q8N907 189 aa13.32□□□□□ -0.28
SSR1-204ENST00000474597 COPS9Q8WXC6 57 aa13.32□□□□□ -0.28
SSR1-204ENST00000474597 KLK5Q9Y337 293 aaPredicted RBP13.32□□□□□ -0.28
SSR1-204ENST00000474597 A0A1B0GWB2 263 aa13.32□□□□□ -0.28
SSR1-204ENST00000474597 A4D1N5 150 aa13.32□□□□□ -0.28
SSR1-204ENST00000474597 C9orf118A6NHY6 69 aa13.32□□□□□ -0.28
SSR1-204ENST00000474597 APLNQ9ULZ1 77 aa13.31□□□□□ -0.28
SSR1-204ENST00000474597 IGKV2D-24A0A075B6R9 120 aa13.3□□□□□ -0.28
SSR1-204ENST00000474597 UBE2DNLQ8IWF7 75 aa13.3□□□□□ -0.28
SSR1-204ENST00000474597 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.29□□□□□ -0.28
SSR1-204ENST00000474597 H3BUT2 72 aa13.29□□□□□ -0.28
SSR1-204ENST00000474597 LINC00158P58513 81 aa13.29□□□□□ -0.28
SSR1-204ENST00000474597 SPAG11BQ08648 103 aa13.29□□□□□ -0.28
SSR1-204ENST00000474597 IBA57-AS1B1ANH7 110 aa13.29□□□□□ -0.28
SSR1-204ENST00000474597 KIAA0087Q14695 138 aa13.29□□□□□ -0.28
SSR1-204ENST00000474597 C2orf82Q6UX34 121 aa13.29□□□□□ -0.28
SSR1-204ENST00000474597 Q9HAA7 133 aa13.29□□□□□ -0.28
SSR1-204ENST00000474597 CFC1BP0CG36 223 aa13.28□□□□□ -0.28
SSR1-204ENST00000474597 CFC1P0CG37 223 aa13.28□□□□□ -0.28
SSR1-204ENST00000474597 VAMP3Q15836 100 aa13.28□□□□□ -0.28
SSR1-204ENST00000474597 NAA38Q9BRA0 125 aaKnown RBP13.28□□□□□ -0.28
SSR1-204ENST00000474597 LINC00308Q8TCZ7 52 aa13.27□□□□□ -0.28
SSR1-204ENST00000474597 ERG28Q9UKR5 140 aa13.27□□□□□ -0.28
SSR1-204ENST00000474597 STAB2Q8WWQ8 2551 aa13.27□□□□□ -0.29
SSR1-204ENST00000474597 PFN2P35080 140 aa13.26□□□□□ -0.29
SSR1-204ENST00000474597 KRTAP26-1Q6PEX3 210 aa13.26□□□□□ -0.29
SSR1-204ENST00000474597 MIR7-3HGQ8N6C7 128 aa13.25□□□□□ -0.29
SSR1-204ENST00000474597 A0A0B4J2C4 111 aa13.25□□□□□ -0.29
SSR1-204ENST00000474597 PGPEP1Q9NXJ5 209 aa13.24□□□□□ -0.29
SSR1-204ENST00000474597 PRO1854Q9UHT4 67 aa13.24□□□□□ -0.29
SSR1-204ENST00000474597 RMI2Q96E14 147 aa13.23□□□□□ -0.29
SSR1-204ENST00000474597 A0A1W2PPM0 123 aa13.22□□□□□ -0.29
SSR1-204ENST00000474597 ZNF561-AS1K7EIQ3 104 aa13.22□□□□□ -0.29
SSR1-204ENST00000474597 C6orf223Q8N319 242 aa13.22□□□□□ -0.29
SSR1-204ENST00000474597 EIF4EBP3O60516 100 aaPredicted RBP13.21□□□□□ -0.29
SSR1-204ENST00000474597 FABP2P12104 132 aa13.21□□□□□ -0.29
SSR1-204ENST00000474597 LINC00526Q96FQ7 95 aa13.21□□□□□ -0.29
SSR1-204ENST00000474597 COX17Q14061 63 aa13.2□□□□□ -0.3
SSR1-204ENST00000474597 SOSTDC1Q6X4U4 206 aa13.2□□□□□ -0.3
SSR1-204ENST00000474597 PPDPFQ9H3Y8 114 aa13.2□□□□□ -0.3
SSR1-204ENST00000474597 HIGD2BQ4VC39 106 aa13.2□□□□□ -0.3
SSR1-204ENST00000474597 TSPAN13O95857 204 aa13.19□□□□□ -0.3
SSR1-204ENST00000474597 UNQ6190/PRO20217Q6UXQ8 127 aa13.19□□□□□ -0.3
SSR1-204ENST00000474597 NTN5Q8WTR8 489 aaPredicted RBP13.19□□□□□ -0.3
SSR1-204ENST00000474597 MEGF8Q7Z7M0 2845 aa13.19□□□□□ -0.3
SSR1-204ENST00000474597 PRKDCP78527 4128 aaKnown RBP13.19□□□□□ -0.3
SSR1-204ENST00000474597 C15orf56Q8N910 161 aa13.17□□□□□ -0.3
SSR1-204ENST00000474597 GAGE10A6NGK3 116 aa13.16□□□□□ -0.3
SSR1-204ENST00000474597 H7C2G1 150 aa13.16□□□□□ -0.3
SSR1-204ENST00000474597 Q1RN00 199 aa13.16□□□□□ -0.3
SSR1-204ENST00000474597 C10orf25Q5T742 122 aa13.16□□□□□ -0.3
SSR1-204ENST00000474597 CAMK2N2Q96S95 79 aa13.16□□□□□ -0.3
SSR1-204ENST00000474597 UBE2V1Q13404 147 aa13.16□□□□□ -0.3
SSR1-204ENST00000474597 C9orf116Q5BN46 136 aaPredicted RBP13.16□□□□□ -0.3
SSR1-204ENST00000474597 GTF2H5Q6ZYL4 71 aa13.16□□□□□ -0.3
SSR1-204ENST00000474597 SPCS1Q9Y6A9 102 aa13.16□□□□□ -0.3
SSR1-204ENST00000474597 SND1-IT1Q9HBX3 110 aa13.15□□□□□ -0.3
SSR1-204ENST00000474597 C2orf48Q96LS8 159 aa13.13□□□□□ -0.31
SSR1-204ENST00000474597 GVQW2A0A096LPI5 108 aaPredicted RBP13.13□□□□□ -0.31
SSR1-204ENST00000474597 LOC107984156A0A0G2JMH3 177 aa13.13□□□□□ -0.31
SSR1-204ENST00000474597 PSMB2P49721 201 aa13.13□□□□□ -0.31
SSR1-204ENST00000474597 ARL17AQ8IVW1 177 aa13.13□□□□□ -0.31
SSR1-204ENST00000474597 K7EP34 96 aa13.12□□□□□ -0.31
SSR1-204ENST00000474597 LYRM7Q5U5X0 104 aa13.12□□□□□ -0.31
SSR1-204ENST00000474597 MUC7Q8TAX7 377 aa13.12□□□□□ -0.31
SSR1-204ENST00000474597 TRBV30A0A0K0K1B3 111 aa13.11□□□□□ -0.31
SSR1-204ENST00000474597 F8WDY8 70 aa13.11□□□□□ -0.31
SSR1-204ENST00000474597 RPL13AP40429 203 aaKnown RBP13.11□□□□□ -0.31
SSR1-204ENST00000474597 C6orf48Q9UBA6 75 aa13.11□□□□□ -0.31
SSR1-204ENST00000474597 SCGB1C2P0DMR2 95 aa13.09□□□□□ -0.31
SSR1-204ENST00000474597 TTC32Q5I0X7 151 aa13.09□□□□□ -0.31
SSR1-204ENST00000474597 KRTAP1-5Q9BYS1 174 aa13.09□□□□□ -0.31
SSR1-204ENST00000474597 DYNC2H1Q8NCM8 4307 aaKnown RBP13.09□□□□□ -0.31
SSR1-204ENST00000474597 USP17L23D6RBM5 183 aa13.09□□□□□ -0.31
SSR1-204ENST00000474597 TRAV13-2A0A0B4J235 113 aa13.08□□□□□ -0.32
SSR1-204ENST00000474597 Q6ZRU5 148 aa13.08□□□□□ -0.32
SSR1-204ENST00000474597 CASC10Q5T4H9 136 aa13.07□□□□□ -0.32
SSR1-204ENST00000474597 PSCAO43653 123 aa13.06□□□□□ -0.32
SSR1-204ENST00000474597 SYCNQ0VAF6 134 aa13.06□□□□□ -0.32
SSR1-204ENST00000474597 NBDYA0A0U1RRE5 68 aa13.04□□□□□ -0.32
SSR1-204ENST00000474597 CSMD3Q7Z407 3707 aa13.04□□□□□ -0.32
SSR1-204ENST00000474597 IGKV2-28A0A075B6P5 120 aa13.04□□□□□ -0.32
SSR1-204ENST00000474597 IGKV2D-28P01615 120 aa13.04□□□□□ -0.32
SSR1-204ENST00000474597 TRIAP1O43715 76 aa13.03□□□□□ -0.32
SSR1-204ENST00000474597 COX6CP09669 75 aa13.03□□□□□ -0.32
SSR1-204ENST00000474597 DNAH7Q8WXX0 4024 aa13.03□□□□□ -0.32
SSR1-204ENST00000474597 LECT2O14960 151 aa13.02□□□□□ -0.32
SSR1-204ENST00000474597 NDUFC2O95298 119 aa13.02□□□□□ -0.32
SSR1-204ENST00000474597 LINC00337Q8N6G1 96 aa13.02□□□□□ -0.32
SSR1-204ENST00000474597 CARD19Q96LW7 228 aa13.02□□□□□ -0.32
SSR1-204ENST00000474597 TRBV20-1A0A075B6N2 111 aa13.01□□□□□ -0.33
SSR1-204ENST00000474597 OR13C6PQ8NH95 151 aa13.01□□□□□ -0.33
SSR1-204ENST00000474597 WWC2-AS2Q96NR7 200 aa13□□□□□ -0.33
SSR1-204ENST00000474597 NDUFC2-KCTD14E9PQ53 114 aa12.99□□□□□ -0.33
SSR1-204ENST00000474597 H3BMG7 143 aa12.99□□□□□ -0.33
SSR1-204ENST00000474597 LYSTQ99698 3801 aa12.99□□□□□ -0.33
SSR1-204ENST00000474597 TCL1BO95988 128 aa12.97□□□□□ -0.33
SSR1-204ENST00000474597 RNF151Q2KHN1 245 aa12.97□□□□□ -0.33
SSR1-204ENST00000474597 XAGE1AQ9HD64 81 aa12.97□□□□□ -0.33
SSR1-204ENST00000474597 PRR3P79522 188 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms