RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 C14orf132Q9NPU4 83 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 NOTCH1P46531 2555 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 IGHV7-4-1A0A0J9YVY3 117 aa5.12□□□□□ -1.59
GPNMB-209ENST00000474157 GNRH2O43555 120 aa5.12□□□□□ -1.59
GPNMB-209ENST00000474157 LHBP01229 141 aa5.12□□□□□ -1.59
GPNMB-209ENST00000474157 LYZP61626 148 aa5.12□□□□□ -1.59
GPNMB-209ENST00000474157 NREPQ16612 68 aa5.12□□□□□ -1.59
GPNMB-209ENST00000474157 RPL39P5Q59GN2 51 aa5.12□□□□□ -1.59
GPNMB-209ENST00000474157 LINC00167Q96N53 147 aa5.12□□□□□ -1.59
GPNMB-209ENST00000474157 KIF25-AS1Q9Y6Z4 181 aa5.12□□□□□ -1.59
GPNMB-209ENST00000474157 VPS13CQ709C8 3753 aa5.12□□□□□ -1.59
GPNMB-209ENST00000474157 SONP18583 2426 aaKnown RBP5.12□□□□□ -1.59
GPNMB-209ENST00000474157 PKD1L1Q8TDX9 2849 aa5.11□□□□□ -1.59
GPNMB-209ENST00000474157 PINLYPA6NC86 204 aa5.11□□□□□ -1.59
GPNMB-209ENST00000474157 TRGV3P03979 118 aa5.11□□□□□ -1.59
GPNMB-209ENST00000474157 CTSGP08311 255 aa5.11□□□□□ -1.59
GPNMB-209ENST00000474157 SAA2P0DJI9 122 aaPredicted RBP5.11□□□□□ -1.59
GPNMB-209ENST00000474157 ELOF1P60002 83 aaKnown RBP5.11□□□□□ -1.59
GPNMB-209ENST00000474157 WT1-ASQ06250 92 aa5.11□□□□□ -1.59
GPNMB-209ENST00000474157 GPHB5Q86YW7 130 aa5.11□□□□□ -1.59
GPNMB-209ENST00000474157 CUBNO60494 3623 aa5.11□□□□□ -1.59
GPNMB-209ENST00000474157 MEGF8Q7Z7M0 2845 aa5.1□□□□□ -1.59
GPNMB-209ENST00000474157 LOC110117498A0A087WWA1 95 aa5.1□□□□□ -1.59
GPNMB-209ENST00000474157 IGHV3-43A0A0B4J1X8 118 aa5.1□□□□□ -1.59
GPNMB-209ENST00000474157 IGKV3D-20A0A0C4DH25 116 aa5.1□□□□□ -1.59
GPNMB-209ENST00000474157 DEFB108AA8MXU0 73 aa5.1□□□□□ -1.59
GPNMB-209ENST00000474157 NDUFB1O75438 58 aa5.1□□□□□ -1.59
GPNMB-209ENST00000474157 IGHV3-9P01782 118 aa5.1□□□□□ -1.59
GPNMB-209ENST00000474157 IGHV3-43DP0DP04 118 aa5.1□□□□□ -1.59
GPNMB-209ENST00000474157 CCL3P10147 92 aa5.1□□□□□ -1.59
GPNMB-209ENST00000474157 LINC01554Q52M75 96 aa5.1□□□□□ -1.59
GPNMB-209ENST00000474157 ZNF625Q96I27 306 aaPredicted RBP5.1□□□□□ -1.59
GPNMB-209ENST00000474157 DEFB126Q9BYW3 111 aa5.1□□□□□ -1.59
GPNMB-209ENST00000474157 INTS1Q8N201 2190 aaKnown RBP5.09□□□□□ -1.59
GPNMB-209ENST00000474157 TET2Q6N021 2002 aaPredicted RBP5.09□□□□□ -1.59
GPNMB-209ENST00000474157 ANK2Q01484 3957 aa5.09□□□□□ -1.59
GPNMB-209ENST00000474157 IGKV3D-15A0A087WSY6 115 aa5.09□□□□□ -1.59
GPNMB-209ENST00000474157 A0A087WZ39 114 aa5.09□□□□□ -1.59
GPNMB-209ENST00000474157 SPINK14Q6IE38 97 aa5.09□□□□□ -1.59
GPNMB-209ENST00000474157 CDC42SE1Q9NRR8 79 aa5.09□□□□□ -1.59
GPNMB-209ENST00000474157 ALPK2Q86TB3 2170 aa5.09□□□□□ -1.59
GPNMB-209ENST00000474157 DOCK7Q96N67 2140 aa5.09□□□□□ -1.59
GPNMB-209ENST00000474157 IGLV5-37A0A075B6J1 123 aa5.08□□□□□ -1.6
GPNMB-209ENST00000474157 IGHV3OR16-9A0A0B4J2B5 98 aa5.08□□□□□ -1.6
GPNMB-209ENST00000474157 C16orf90A8MZG2 172 aa5.08□□□□□ -1.6
GPNMB-209ENST00000474157 KLLNB2CW77 178 aa5.08□□□□□ -1.6
GPNMB-209ENST00000474157 HCG22E2RYF7 251 aa5.08□□□□□ -1.6
GPNMB-209ENST00000474157 BUB1B-PAK6H3BSN5 160 aa5.08□□□□□ -1.6
GPNMB-209ENST00000474157 KRTAP1-1Q07627 177 aa5.08□□□□□ -1.6
GPNMB-209ENST00000474157 FAM19A3Q7Z5A8 133 aa5.08□□□□□ -1.6
GPNMB-209ENST00000474157 C9orf106Q8NAJ2 232 aa5.08□□□□□ -1.6
GPNMB-209ENST00000474157 KRTAP4-5Q9BYR2 181 aa5.08□□□□□ -1.6
GPNMB-209ENST00000474157 FREM1Q5H8C1 2179 aa5.08□□□□□ -1.6
GPNMB-209ENST00000474157 H0Y9J4 135 aa5.07□□□□□ -1.6
GPNMB-209ENST00000474157 PSCAO43653 123 aa5.07□□□□□ -1.6
GPNMB-209ENST00000474157 CRPP02741 224 aa5.07□□□□□ -1.6
GPNMB-209ENST00000474157 PRM2P04554 102 aa5.07□□□□□ -1.6
GPNMB-209ENST00000474157 LINC01547P58512 204 aaPredicted RBP5.07□□□□□ -1.6
GPNMB-209ENST00000474157 DEFB114Q30KQ6 69 aa5.07□□□□□ -1.6
GPNMB-209ENST00000474157 Q75L30 129 aa5.07□□□□□ -1.6
GPNMB-209ENST00000474157 C20orf203Q8NBC4 194 aa5.07□□□□□ -1.6
GPNMB-209ENST00000474157 TGP01266 2768 aa5.07□□□□□ -1.6
GPNMB-209ENST00000474157 TRAV10A0A0B4J240 114 aa5.06□□□□□ -1.6
GPNMB-209ENST00000474157 TRAV21A0A0B4J279 112 aa5.06□□□□□ -1.6
GPNMB-209ENST00000474157 LOC101927531A0A1B0GV80 90 aa5.06□□□□□ -1.6
GPNMB-209ENST00000474157 BPY2O14599 106 aa5.06□□□□□ -1.6
GPNMB-209ENST00000474157 MRPL33O75394 65 aaKnown RBP5.06□□□□□ -1.6
GPNMB-209ENST00000474157 LY6HO94772 140 aa5.06□□□□□ -1.6
GPNMB-209ENST00000474157 RPL27AP46776 148 aaKnown RBP5.06□□□□□ -1.6
GPNMB-209ENST00000474157 Q5VV11 94 aa5.06□□□□□ -1.6
GPNMB-209ENST00000474157 NOTCH2NLQ7Z3S9 236 aa5.06□□□□□ -1.6
GPNMB-209ENST00000474157 MIR7-3HGQ8N6C7 128 aa5.06□□□□□ -1.6
GPNMB-209ENST00000474157 RNF5Q99942 180 aa5.06□□□□□ -1.6
GPNMB-209ENST00000474157 ZANQ9Y493 2812 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 MGAM2Q2M2H8 2515 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 NACAE9PAV3 2078 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 IGLV5-45A0A087WSX0 123 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 IGKV2-40A0A087WW87 121 aaPredicted RBP5.05□□□□□ -1.6
GPNMB-209ENST00000474157 A0A0J9YXV3 536 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 LCE6AA0A183 80 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 A0A1B0GW54 56 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 C3orf84H3BNL1 204 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 I3L2K1 104 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 IGKV1-17P01599 117 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 IGKV2D-40P01614 121 aaPredicted RBP5.05□□□□□ -1.6
GPNMB-209ENST00000474157 C9orf116Q5BN46 136 aaPredicted RBP5.05□□□□□ -1.6
GPNMB-209ENST00000474157 FAM74A4Q5TZK3 123 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 C1orf64Q8NEQ6 169 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 FAM218AQ96MZ4 157 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 CCL19Q99731 98 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 PRR14LQ5THK1 2151 aa5.05□□□□□ -1.6
GPNMB-209ENST00000474157 IGLV4-3A0A075B6K6 122 aa5.04□□□□□ -1.6
GPNMB-209ENST00000474157 CHKB-CPT1BH3BT56 60 aa5.04□□□□□ -1.6
GPNMB-209ENST00000474157 PSPHP1O15172 72 aa5.04□□□□□ -1.6
GPNMB-209ENST00000474157 LINC00313P59037 77 aa5.04□□□□□ -1.6
GPNMB-209ENST00000474157 C17orf58Q2M2W7 97 aa5.04□□□□□ -1.6
GPNMB-209ENST00000474157 FBXL19-AS1Q494R0 122 aa5.04□□□□□ -1.6
GPNMB-209ENST00000474157 C9orf66Q5T8R8 295 aa5.04□□□□□ -1.6
GPNMB-209ENST00000474157 MAPK1IP1LQ8NDC0 245 aa5.04□□□□□ -1.6
GPNMB-209ENST00000474157 RPL39LQ96EH5 51 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms