RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 LOC101927531A0A1B0GV80 90 aa3.48□□□□□ -1.85
TMEM39A-206ENST00000473684 A6NED7 52 aa3.48□□□□□ -1.85
TMEM39A-206ENST00000473684 M0R2N4 97 aa3.48□□□□□ -1.85
TMEM39A-206ENST00000473684 IGKV2-30P06310 120 aa3.48□□□□□ -1.85
TMEM39A-206ENST00000473684 LINC01554Q52M75 96 aa3.48□□□□□ -1.85
TMEM39A-206ENST00000473684 Q8N9P0 234 aaPredicted RBP3.48□□□□□ -1.85
TMEM39A-206ENST00000473684 USP34Q70CQ2 3546 aa3.48□□□□□ -1.85
TMEM39A-206ENST00000473684 MINOS1Q5TGZ0 78 aa3.47□□□□□ -1.85
TMEM39A-206ENST00000473684 LINC00575Q6W349 94 aa3.47□□□□□ -1.85
TMEM39A-206ENST00000473684 SCXQ7RTU7 201 aa3.47□□□□□ -1.85
TMEM39A-206ENST00000473684 PRR15LQ9BU68 103 aa3.47□□□□□ -1.85
TMEM39A-206ENST00000473684 CDC42SE2Q9NRR3 84 aa3.47□□□□□ -1.85
TMEM39A-206ENST00000473684 RANBP2P49792 3224 aaKnown RBP3.47□□□□□ -1.85
TMEM39A-206ENST00000473684 ZFHX3Q15911 3703 aa3.47□□□□□ -1.85
TMEM39A-206ENST00000473684 ODF3BA8MYP8 253 aa3.47□□□□□ -1.85
TMEM39A-206ENST00000473684 FDCSPQ8NFU4 85 aa3.47□□□□□ -1.85
TMEM39A-206ENST00000473684 USP24Q9UPU5 2620 aa3.47□□□□□ -1.85
TMEM39A-206ENST00000473684 KIAA0087Q14695 138 aa3.46□□□□□ -1.85
TMEM39A-206ENST00000473684 Q9BRP9 147 aa3.46□□□□□ -1.85
TMEM39A-206ENST00000473684 PIEZO1Q92508 2521 aa3.46□□□□□ -1.86
TMEM39A-206ENST00000473684 NANOS2P60321 138 aaKnown RBP3.46□□□□□ -1.86
TMEM39A-206ENST00000473684 C9orf116Q5BN46 136 aaPredicted RBP3.46□□□□□ -1.86
TMEM39A-206ENST00000473684 NDUFA4O00483 81 aa3.46□□□□□ -1.86
TMEM39A-206ENST00000473684 DEFB1P60022 68 aa3.46□□□□□ -1.86
TMEM39A-206ENST00000473684 CACNA1EQ15878 2313 aa3.46□□□□□ -1.86
TMEM39A-206ENST00000473684 DNAH14Q0VDD8 3507 aa3.45□□□□□ -1.86
TMEM39A-206ENST00000473684 CACNA1GO43497 2377 aa3.45□□□□□ -1.86
TMEM39A-206ENST00000473684 IGHV3-53P01767 116 aa3.45□□□□□ -1.86
TMEM39A-206ENST00000473684 MOBPQ13875 183 aa3.45□□□□□ -1.86
TMEM39A-206ENST00000473684 B9D2Q9BPU9 175 aa3.45□□□□□ -1.86
TMEM39A-206ENST00000473684 NCOR1O75376 2440 aa3.45□□□□□ -1.86
TMEM39A-206ENST00000473684 COX7BP24311 80 aa3.45□□□□□ -1.86
TMEM39A-206ENST00000473684 LINC00313P59037 77 aa3.45□□□□□ -1.86
TMEM39A-206ENST00000473684 PRB3Q04118 309 aaPredicted RBP3.45□□□□□ -1.86
TMEM39A-206ENST00000473684 ASB16-AS1Q495Z4 193 aa3.45□□□□□ -1.86
TMEM39A-206ENST00000473684 LINC01006Q8NI28 216 aa3.45□□□□□ -1.86
TMEM39A-206ENST00000473684 BRCA2P51587 3418 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 MP68P56378 58 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 SPANXA2-OT1Q8N9U9 137 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 IGLV4-60A0A075B6I1 120 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 TRGV2A0A075B6R0 118 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 A0A087X002 238 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 ETDCA0A1B0GVM5 59 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 LINC00208Q96KT6 92 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 CUL9Q8IWT3 2517 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 C3orf84H3BNL1 204 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 CCL24O00175 119 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 ATP6V0E1O15342 81 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 PRM2P04554 102 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 TOMM7Q9P0U1 55 aa3.44□□□□□ -1.86
TMEM39A-206ENST00000473684 UBR5O95071 2799 aaPredicted RBP3.43□□□□□ -1.86
TMEM39A-206ENST00000473684 IGHV3-73A0A0B4J1V6 119 aa3.43□□□□□ -1.86
TMEM39A-206ENST00000473684 IGLV9-49A0A0B4J1Y8 123 aa3.43□□□□□ -1.86
TMEM39A-206ENST00000473684 C6orf99Q4VX62 202 aa3.43□□□□□ -1.86
TMEM39A-206ENST00000473684 Q8N9W7 124 aa3.43□□□□□ -1.86
TMEM39A-206ENST00000473684 CELA1Q9UNI1 258 aa3.43□□□□□ -1.86
TMEM39A-206ENST00000473684 NBEAQ8NFP9 2946 aa3.43□□□□□ -1.86
TMEM39A-206ENST00000473684 URB1O60287 2271 aaKnown RBP3.43□□□□□ -1.86
TMEM39A-206ENST00000473684 WNK2Q9Y3S1 2297 aa3.43□□□□□ -1.86
TMEM39A-206ENST00000473684 LMO4P61968 165 aa3.43□□□□□ -1.86
TMEM39A-206ENST00000473684 KRTAP9-8Q9BYQ0 159 aa3.43□□□□□ -1.86
TMEM39A-206ENST00000473684 ZFHX2Q9C0A1 2572 aaPredicted RBP3.42□□□□□ -1.86
TMEM39A-206ENST00000473684 PRB1P04280 392 aa3.42□□□□□ -1.86
TMEM39A-206ENST00000473684 CASC2Q6XLA1 102 aa3.42□□□□□ -1.86
TMEM39A-206ENST00000473684 SMIM29Q86T20 159 aa3.42□□□□□ -1.86
TMEM39A-206ENST00000473684 Q8N9L7 120 aa3.42□□□□□ -1.86
TMEM39A-206ENST00000473684 AHCTF1Q8WYP5 2266 aa3.42□□□□□ -1.86
TMEM39A-206ENST00000473684 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.42□□□□□ -1.86
TMEM39A-206ENST00000473684 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.42□□□□□ -1.86
TMEM39A-206ENST00000473684 LINC00612Q8N6U2 182 aa3.42□□□□□ -1.86
TMEM39A-206ENST00000473684 MINOS1-NBL1R4GNA1 71 aa3.42□□□□□ -1.86
TMEM39A-206ENST00000473684 A0A1B0GW54 56 aa3.41□□□□□ -1.86
TMEM39A-206ENST00000473684 Q6ZQY7 126 aa3.41□□□□□ -1.86
TMEM39A-206ENST00000473684 RHPN1-AS1Q9BWJ2 59 aa3.41□□□□□ -1.86
TMEM39A-206ENST00000473684 ABCA4P78363 2273 aa3.41□□□□□ -1.86
TMEM39A-206ENST00000473684 IGHV4-30-2A0A087WSY4 118 aa3.41□□□□□ -1.86
TMEM39A-206ENST00000473684 C19orf84I3L1E1 186 aa3.41□□□□□ -1.86
TMEM39A-206ENST00000473684 COX17Q14061 63 aa3.41□□□□□ -1.86
TMEM39A-206ENST00000473684 IGHV3OR16-9A0A0B4J2B5 98 aa3.4□□□□□ -1.86
TMEM39A-206ENST00000473684 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.86
TMEM39A-206ENST00000473684 VPS13AQ96RL7 3174 aa3.4□□□□□ -1.87
TMEM39A-206ENST00000473684 PRR4Q16378 134 aa3.4□□□□□ -1.87
TMEM39A-206ENST00000473684 HIGD2BQ4VC39 106 aa3.4□□□□□ -1.87
TMEM39A-206ENST00000473684 ICE1Q9Y2F5 2266 aa3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 MKI67P46013 3256 aaKnown RBP3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 A0A1B0GUV1 79 aa3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 H0Y9J4 135 aa3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 H3BPC8 53 aa3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 SPINK13Q1W4C9 94 aa3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 KCNQ1DNQ9H478 68 aa3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 IGKV3-7A0A075B6H7 116 aa3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 A0A1W2PNU3 283 aaPredicted RBP3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 G3V318 75 aa3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 BSPH1Q075Z2 132 aa3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 C18orf65Q6ZTR6 163 aa3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 Q8IZM0 81 aa3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 LINC01558Q9Y6Z2 57 aa3.39□□□□□ -1.87
TMEM39A-206ENST00000473684 IGHV4-61A0A0C4DH41 118 aa3.38□□□□□ -1.87
TMEM39A-206ENST00000473684 IGHV4-59P01825 116 aa3.38□□□□□ -1.87
TMEM39A-206ENST00000473684 USMG5Q96IX5 58 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms