RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 H3BNG1 76 aa4.21□□□□□ -1.74
CLK1-210ENST00000473565 COX7A2LO14548 114 aa4.21□□□□□ -1.74
CLK1-210ENST00000473565 FOXI1Q12951 378 aa4.21□□□□□ -1.74
CLK1-210ENST00000473565 C6orf226Q5I0X4 101 aa4.21□□□□□ -1.74
CLK1-210ENST00000473565 CD164L2Q6UWJ8 174 aa4.21□□□□□ -1.74
CLK1-210ENST00000473565 MTURNQ8N3F0 131 aa4.21□□□□□ -1.74
CLK1-210ENST00000473565 SPANXDQ9BXN6 97 aa4.21□□□□□ -1.74
CLK1-210ENST00000473565 SPANXCQ9NY87 97 aa4.21□□□□□ -1.74
CLK1-210ENST00000473565 RPL24P83731 157 aaKnown RBP4.21□□□□□ -1.74
CLK1-210ENST00000473565 C6orf223Q8N319 242 aa4.21□□□□□ -1.74
CLK1-210ENST00000473565 FABP2P12104 132 aa4.2□□□□□ -1.74
CLK1-210ENST00000473565 MALP21145 153 aa4.2□□□□□ -1.74
CLK1-210ENST00000473565 LINC00308Q8TCZ7 52 aa4.2□□□□□ -1.74
CLK1-210ENST00000473565 PRR34Q9NV39 138 aa4.2□□□□□ -1.74
CLK1-210ENST00000473565 DNAH1Q9P2D7 4330 aa4.2□□□□□ -1.74
CLK1-210ENST00000473565 DYNC2H1Q8NCM8 4307 aaKnown RBP4.2□□□□□ -1.74
CLK1-210ENST00000473565 LOC107984156A0A0G2JMH3 177 aa4.2□□□□□ -1.74
CLK1-210ENST00000473565 K7EP34 96 aa4.2□□□□□ -1.74
CLK1-210ENST00000473565 CRPP02741 224 aa4.2□□□□□ -1.74
CLK1-210ENST00000473565 LINC00158P58513 81 aa4.2□□□□□ -1.74
CLK1-210ENST00000473565 CIRBPQ14011 172 aaKnown RBP4.2□□□□□ -1.74
CLK1-210ENST00000473565 C9orf116Q5BN46 136 aaPredicted RBP4.2□□□□□ -1.74
CLK1-210ENST00000473565 ARL17AQ8IVW1 177 aa4.2□□□□□ -1.74
CLK1-210ENST00000473565 MIR7-3HGQ8N6C7 128 aa4.2□□□□□ -1.74
CLK1-210ENST00000473565 Q9HAA7 133 aa4.19□□□□□ -1.74
CLK1-210ENST00000473565 PRO1854Q9UHT4 67 aa4.19□□□□□ -1.74
CLK1-210ENST00000473565 LINC00588Q9Y4M8 146 aa4.19□□□□□ -1.74
CLK1-210ENST00000473565 STARD9Q9P2P6 4700 aa4.19□□□□□ -1.74
CLK1-210ENST00000473565 TIMM17BO60830 172 aa4.19□□□□□ -1.74
CLK1-210ENST00000473565 KIAA0087Q14695 138 aa4.19□□□□□ -1.74
CLK1-210ENST00000473565 Q1RN00 199 aa4.19□□□□□ -1.74
CLK1-210ENST00000473565 C10orf25Q5T742 122 aa4.19□□□□□ -1.74
CLK1-210ENST00000473565 FBN3Q75N90 2809 aa4.18□□□□□ -1.74
CLK1-210ENST00000473565 H3BMG7 143 aa4.18□□□□□ -1.74
CLK1-210ENST00000473565 HERV-K104P63124 156 aa4.18□□□□□ -1.74
CLK1-210ENST00000473565 B9D2Q9BPU9 175 aa4.18□□□□□ -1.74
CLK1-210ENST00000473565 CKS1BP61024 79 aa4.18□□□□□ -1.74
CLK1-210ENST00000473565 HIGD2BQ4VC39 106 aa4.18□□□□□ -1.74
CLK1-210ENST00000473565 Q8IZM0 81 aa4.18□□□□□ -1.74
CLK1-210ENST00000473565 ERG28Q9UKR5 140 aa4.18□□□□□ -1.74
CLK1-210ENST00000473565 SPAG11BQ08648 103 aa4.17□□□□□ -1.74
CLK1-210ENST00000473565 CFAP161Q6P656 301 aa4.17□□□□□ -1.74
CLK1-210ENST00000473565 UNQ6190/PRO20217Q6UXQ8 127 aa4.17□□□□□ -1.74
CLK1-210ENST00000473565 GTF2H5Q6ZYL4 71 aa4.17□□□□□ -1.74
CLK1-210ENST00000473565 IGKV2D-24A0A075B6R9 120 aa4.17□□□□□ -1.74
CLK1-210ENST00000473565 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.17□□□□□ -1.74
CLK1-210ENST00000473565 A0A0B4J2C4 111 aa4.17□□□□□ -1.74
CLK1-210ENST00000473565 RPL13AP40429 203 aaKnown RBP4.17□□□□□ -1.74
CLK1-210ENST00000473565 PSMB2P49721 201 aa4.17□□□□□ -1.74
CLK1-210ENST00000473565 IFITM1P13164 125 aa4.17□□□□□ -1.74
CLK1-210ENST00000473565 CCL18P55774 89 aa4.17□□□□□ -1.74
CLK1-210ENST00000473565 LINC01556Q5JQF7 62 aa4.17□□□□□ -1.74
CLK1-210ENST00000473565 KRTAP26-1Q6PEX3 210 aa4.17□□□□□ -1.74
CLK1-210ENST00000473565 SCGB1C2P0DMR2 95 aa4.16□□□□□ -1.74
CLK1-210ENST00000473565 C15orf53Q8NAA6 179 aa4.16□□□□□ -1.74
CLK1-210ENST00000473565 IBA57-AS1B1ANH7 110 aa4.16□□□□□ -1.74
CLK1-210ENST00000473565 TCL1BO95988 128 aa4.16□□□□□ -1.74
CLK1-210ENST00000473565 CASC10Q5T4H9 136 aa4.16□□□□□ -1.74
CLK1-210ENST00000473565 TRIAP1O43715 76 aa4.16□□□□□ -1.74
CLK1-210ENST00000473565 PRR3P79522 188 aaKnown RBP4.16□□□□□ -1.74
CLK1-210ENST00000473565 SND1-IT1Q9HBX3 110 aa4.16□□□□□ -1.74
CLK1-210ENST00000473565 TRAV8-4A0A0B4J246 113 aa4.15□□□□□ -1.74
CLK1-210ENST00000473565 DNAH10OSP0CZ25 163 aa4.15□□□□□ -1.74
CLK1-210ENST00000473565 LINC01561Q8N1V8 128 aa4.15□□□□□ -1.74
CLK1-210ENST00000473565 C1orf43Q9BWL3 253 aa4.15□□□□□ -1.74
CLK1-210ENST00000473565 IGKV2-28A0A075B6P5 120 aa4.15□□□□□ -1.75
CLK1-210ENST00000473565 IGKV2D-28P01615 120 aa4.15□□□□□ -1.75
CLK1-210ENST00000473565 WFDC2Q14508 124 aa4.15□□□□□ -1.75
CLK1-210ENST00000473565 LINC00337Q8N6G1 96 aa4.15□□□□□ -1.75
CLK1-210ENST00000473565 C15orf56Q8N910 161 aa4.15□□□□□ -1.75
CLK1-210ENST00000473565 KLK5Q9Y337 293 aaPredicted RBP4.15□□□□□ -1.75
CLK1-210ENST00000473565 Q8NDZ9 215 aa4.14□□□□□ -1.75
CLK1-210ENST00000473565 LECT2O14960 151 aa4.14□□□□□ -1.75
CLK1-210ENST00000473565 CLEC2BQ92478 149 aa4.14□□□□□ -1.75
CLK1-210ENST00000473565 KRTAP1-5Q9BYS1 174 aa4.14□□□□□ -1.75
CLK1-210ENST00000473565 C6orf48Q9UBA6 75 aa4.14□□□□□ -1.75
CLK1-210ENST00000473565 ZNF561-AS1K7EIQ3 104 aa4.13□□□□□ -1.75
CLK1-210ENST00000473565 NTN5Q8WTR8 489 aaPredicted RBP4.13□□□□□ -1.75
CLK1-210ENST00000473565 XAGE1AQ9HD64 81 aa4.13□□□□□ -1.75
CLK1-210ENST00000473565 PRO0461Q9UI25 63 aa4.13□□□□□ -1.75
CLK1-210ENST00000473565 APLNQ9ULZ1 77 aa4.13□□□□□ -1.75
CLK1-210ENST00000473565 VPS13DQ5THJ4 4388 aa4.13□□□□□ -1.75
CLK1-210ENST00000473565 CXCL5P42830 114 aa4.12□□□□□ -1.75
CLK1-210ENST00000473565 SMCPP49901 116 aaPredicted RBP4.12□□□□□ -1.75
CLK1-210ENST00000473565 Q6ZRU5 148 aa4.12□□□□□ -1.75
CLK1-210ENST00000473565 OR13C6PQ8NH95 151 aa4.12□□□□□ -1.75
CLK1-210ENST00000473565 CAMK2N2Q96S95 79 aa4.12□□□□□ -1.75
CLK1-210ENST00000473565 UBE2DNLQ8IWF7 75 aa4.12□□□□□ -1.75
CLK1-210ENST00000473565 TRBV30A0A0K0K1B3 111 aa4.12□□□□□ -1.75
CLK1-210ENST00000473565 NCR3O14931 201 aa4.12□□□□□ -1.75
CLK1-210ENST00000473565 ETDBQ3ZM63 59 aa4.12□□□□□ -1.75
CLK1-210ENST00000473565 COPS9Q8WXC6 57 aa4.12□□□□□ -1.75
CLK1-210ENST00000473565 C9JAW5 83 aa4.11□□□□□ -1.75
CLK1-210ENST00000473565 LYRM7Q5U5X0 104 aa4.1□□□□□ -1.75
CLK1-210ENST00000473565 UPK3BQ9BT76 320 aa4.1□□□□□ -1.75
CLK1-210ENST00000473565 KMT2AQ03164 3969 aa4.1□□□□□ -1.75
CLK1-210ENST00000473565 USP17L23D6RBM5 183 aa4.1□□□□□ -1.75
CLK1-210ENST00000473565 SLPIP03973 132 aa4.1□□□□□ -1.75
CLK1-210ENST00000473565 NHLRC4P0CG21 123 aaPredicted RBP4.1□□□□□ -1.75
CLK1-210ENST00000473565 GAGE2EQ4V326 116 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms